Hippoglossus stenolepis (Pacific halibut): 118098024
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Entry
118098024 CDS
T08308
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118098024 (arhgef28a)
Membrane trafficking [BR:
hsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118098024 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
SOS1_NGEF_PH
PH_13
PHD
C1_2
Prok-RING_1
PHD_4
DUF7588
Motif
Other DBs
NCBI-GeneID:
118098024
NCBI-ProteinID:
XP_034997291
LinkDB
All DBs
Position
18:16857940..16906434
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AA seq
1775 aa
AA seq
DB search
MEVNRREVPLYGQVEANVKLPASAPEDAEFYAVVQGSRLTHVTAAKRGDDGMCLCFTVPG
HDLVEVVSVTSYFYAEDRVKPCEGKTSLEYVRDVAQDAAEYLSAHREQLGTQSYLEVLKR
FPLLPEEELSLGGLDRDEGDAEEVQLGESRGEEAGLRQLDEKIAQAMANMDYPQQWRNTD
SQQREVAEIQPKETLLHLAVRLGLVHLSRFLIHQPRGQRALTSPNQEGDTPLQLAQRDGQ
HAVFRVLAASAGPGVGPAAGVCSVWSDSSRTLRFCPGTNSLTLTVRQAPGSCPQDDIMVL
RDRQEDHSIVRLISVLRADSEEEERSKDEVLSVDEGISKEPRVEQHVLVDNVFEEQLVLS
LDDDDDDVKEYPSSLSEYDHPVKSAGVESHFTQHATDPLLSMFDIDQKTGHQTQPDDVDL
KCSVSGVTSDSTGTDSGLWDAVDTQDLLLTTDTPPPCPENLCPQLHSSPADQALAKLSCP
TSFEPTDERDTPPMDACDLSPSLVALEVDSEEDSADMKSPLSPLSSDVEKNEDKGDAFCP
SADLTCTRSKSASAACEPPTKELDDQGIRLRSYSYSAPKISLRPARFARDNPTSDTSPDA
VLHSVSHSRSLLQALSLSKSLSLLHPGKQRASSISEQSHEKREFRFRSRAQSADDEGSME
LAESLQHLTLSEFLKEIEEEELDKYSIPTKAESEKYKVIRTFSFLKSRMSSTRSKTKGKG
KDREAKDRQLNGHRFATGSCLGPTICVVCDKPASGKDLLHCSSCTAIVHKGCKESLPPCL
KKQDKYAVTMVKNRTASLPQNFTVRDTPPQCVIPISTSLPVMTGKEKKDTVTQSSCLSGS
FPNSESRLSESSETECDAVKGLSHSEELLPTPTSSTSTDSSFGEDSVDTCIQGDISADAA
DYEAESWSLTVENEFCKKLEKRAVKRQDVIYELMQTELHHLQTLHIMAEVFRRGMREEVQ
LDSEAVKRVFPCLDQLLLFHHGLFAAMKERRHSSAEPQGHRNYLIQRIGDVLLQQFSEES
GENMKQVYGEFCSRHNEAVNFFKELQQHNKRFQNFIKQQGNNSLVRRREIPECILLVTQR
ITKYPVLLERILQYTQEDTEECADLSRALAQIREVIAAVNLRVSEYEWHQRLQEVWNRME
NRSSTKLKSGHTFRKQDMMGPGQILKHQGLLLWKTATGRLKDVLALLLTDTLIFLQEKDQ
KYTFATVDQKPPVIALQKLIVREVANEERGMFLISASSAGPEMYEVHTSSKEERNAWMRL
IREAVESCPEEEEEYASESEEEKRAAEARVQKIHKLQESLMSQDQQICSSLEEKLQIYTE
LSALSGRTDASAVEPRLLVQPHSEDVPQAAELLVAALQEAENLKATLSAKARSPSSHGPD
SDTDSVFAVSPAPHVQLPSDSSEPSPATPEAGEGSWTQAVVPQSPESDDIDLKVSQSVQS
LTQLLYSLQAAVTIQDSCYEVQRLLLQETGRPSPRAQRPHLPSARGNTLQEQEKQRNLEK
QKEEVVAAQRLQDRLRQEKERWDRACQARESQQGEQESRLEERERQCHLEVERLRREREE
LDEQQEEYQQSLERLREGQRSVERERERLEGQQKLLQTWTHGRQRSLPTVIPHMVIPLDV
QQDSAPSQSRDLGGNGSMFVNEAAFASTSINNRHVHHKKNDPSKHNCLNTLLARSNSRQP
PIAKTPHSPHSDSQGWMMGTGYLYSPAGKLGLQHTPTDHSSHSYIGETWLSRASGADLYP
ELPHPRDPQLDLSALVSLETDSGGEEGREETIVYL
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaacagaagagaggtgcctctatatggacaagtggaggccaatgtgaagtta
ccagccagcgctcctgaagacgcagagttttatgctgttgttcaaggttccagactaaca
catgtgacggcagcgaaaagaggagatgatgggatgtgcctttgcttcaccgttcctggt
cacgaccttgtggaagttgtctctgtcacatcctacttttatgcagaggacagagtcaag
ccatgcgaaggtaaaacatctcttgaatacgtcagggacgttgcccaggacgcagcagag
tacctgagtgcacacagggagcagctcggcacccagagctacctggaggtcctgaagagg
tttcctttgctgcctgaagaggagctctcactcggagggttagaccgcgatgagggtgat
gcagaggaggtgcagctcggagaaagtagaggcgaagaagctggtctcaggcagctggat
gagaagatcgcacaggcgatggccaacatggattaccctcagcagtggagaaacactgac
agtcagcaaagggaagttgctgagattcagcccaaagaaaccctgcttcacctggcggtg
cgtctgggtttggtccatctctcccgtttcttaattcaccaaccgagaggtcaaagggca
ttgacctcgcccaatcaggagggagacactcctctgcagctggctcagagggacggacaa
catgctgtgttcagggtgctggcagcctccgcgggtcccggagtcggccccgccgcaggt
gtgtgcagcgtgtggtccgacagctcccgcacgctgaggttctgtcccgggacaaactcc
ctgaccctgactgtgcgacaggcccccggcagctgccctcaggacgacatcatggtgctg
cgagacagacaggaagaccacagcattgtcagactgatcagtgtgctcagagctgatagt
gaggaagaggagagaagtaaagatgaagtcctttctgttgatgaaggcattagcaaggag
ccgcgagtggaacagcacgtgctggtggacaacgtttttgaagagcagcttgttctgtct
ctggacgacgatgacgatgatgtaaaagagtacccatcgtcattatctgaatatgatcat
cctgtgaagtccgctggagtcgagagccattttacccagcatgccacagaccctctgctc
tccatgttcgacatcgatcagaaaaccggacatcagacgcagccggatgatgtcgacctc
aagtgcagcgtcagtggagtgacgagcgacagcacagggacggacagcgggttatgggat
gccgtggacacgcaggatctcctgctcaccactgacactcctccgccctgtccagaaaac
ctctgcccccaactccacagctcacctgctgaccaggccctcgccaagctgagctgtccc
acctcctttgagccgaccgacgagagggacactccgcccatggacgcctgcgacctcagt
cccagtctagtggctctggaggtggacagcgaggaggacagcgccgacatgaagtctccg
ctttcaccgctctcatcagacgtggagaagaacgaagacaaaggagacgccttttgtccc
tccgctgacctcacttgcactcgcagcaagtctgcctctgcggcatgcgaaccccccaca
aaagaattggatgaccaggggattcgactgcgttcctattcctactccgcaccaaaaatc
agtctgcggcctgctcgttttgcccgggacaatcccacttcggacaccagccctgatgcc
gtgctccacagtgtcagccacagccgatctctccttcaggccctctctctgtctaaatct
ctgtctctgctccaccctggtaagcaaagagcctccagtatttcagagcagtcacatgag
aaaagggagtttaggttccgtagtcgtgcccagtctgcggatgacgagggcagcatggag
ctggcagagtcgctccaacacctcacgctgtctgagttcctcaaagaaattgaagaggag
gagctggataagtacagcatcccaaccaaagcggagtcagagaagtacaaagtcatccgc
accttcagtttcctcaagagcaggatgtccagcacacgcagcaagaccaaggggaagggg
aaggacagagaggccaaggacaggcagctgaatggacatcggtttgcgacagggtcctgt
ttaggccccaccatctgtgtggtgtgtgacaaaccagcgtctggcaaggacctgctgcat
tgttccagttgcactgccatcgtccataagggctgtaaggaatctttgccgccatgtttg
aagaaacaggataaatatgctgttaccatggtgaagaacaggacagcatccctcccacag
aatttcacagtgagagacacacctccgcagtgtgtgatccccatctctacctctcttcct
gtcatgacggggaaggagaagaaggacacggtgacccagtcaagctgtttgtctggaagt
ttccccaacagtgaaagtcggctcagtgagagttcagagacagagtgtgacgcagtgaag
gggctcagtcattcagaggagctgctgccgacgccgacgtcctccacctccacggactca
tccttcggagaagacagtgtggacacgtgtatccaaggtgacatctcggcggatgctgcg
gattacgaggcggagtcgtggagtctgacggtggagaacgagttctgcaagaagctcgag
aaacgagcggtcaagaggcaggatgtcatctatgagctgatgcagactgagctccaccac
ctgcagacgctccacatcatggccgaggttttccggcgaggcatgagggaggaggtgcag
ctcgactcagaagcggtgaagcgggtcttcccctgtctggaccagctgctcctcttccac
cacggcctcttcgccgccatgaaggagcggcgacacagctcggccgagccgcagggacac
aggaactacctcatccagcgaataggagacgtcctgctccaacagttttcagaggagagt
ggcgagaacatgaagcaggtatatggagaattctgcagtcgtcacaacgaagccgtcaac
tttttcaaagaactacagcagcacaacaaaagatttcagaacttcattaagcaacaaggt
aataattccttggtgcgacggagagagatcccagaatgcatcttgctcgtaacccaaagg
attacaaagtacccagtgctgctggagaggatcctacaatacactcaagaggacacagag
gaatgtgccgacctttcgagagccctggctcagatccgggaggtgatagcagccgtgaac
ttgagggtcagcgagtatgagtggcatcagagattacaggaagtgtggaaccgcatggag
aaccgcagctcgaccaagctgaagagcggacataccttcaggaagcaggacatgatgggg
ccgggacaaattctcaagcaccagggcctgctcctgtggaagactgccaccgggcgactg
aaagacgtcctggcgctccttctcacagacacgctcatcttcctgcaggaaaaagaccag
aagtacacgtttgccactgtggaccagaagcctccagtcatcgcactgcagaagttaata
gtgcgagaagtagcgaatgaagagagggggatgtttctgatcagcgcgtcatctgcgggg
ccagaaatgtacgaggtccacacgtcgtccaaagaggaacggaacgcttggatgaggctc
attagagaggctgtggagagctgtccggaagaagaggaggagtacgcgagtgaatctgag
gaagagaagcgagctgctgaggctcgtgttcagaagattcacaagttacaagagagtctg
atgagccaggaccagcagatctgctccagcctggaggagaagctgcagatctacaccgag
ctctctgctctgagtgggaggacggacgcctcggcagtggagccgcggctgctcgtccag
ccgcactcagaggacgtgccccaggcggccgagctgctggttgcagctctgcaggaggct
gaaaacctcaaagctacgctgtcagccaaggcccgttctccgtccagccacggcccggac
tctgacacggactctgtgttcgccgtcagccctgctccgcatgtacagctcccctcagat
tcttcagagccctcacctgcgacccccgaggccggggaggggagctggacccaggccgtc
gttcctcagtccccggagtcggatgacattgacttgaaggtttctcaaagtgtccaaagc
ctgacgcagttactctacagtctgcaggctgcagtgaccatccaagacagctgctacgag
gtccagaggctcctcctccaagagaccgggcgcccgtcgccacgagctcagcgacctcac
cttccgagcgcccgcggcaacaccctgcaagagcaggagaagcaacgcaacctggagaag
cagaaagaggaggtggtggcggctcagcggctccaggaccgactgcgccaggagaaggag
cgctgggacagggcgtgccaggccagggagagccagcagggggagcaggagagcaggctg
gaggagagggagaggcagtgccacctggaggtggagaggctgcggcgcgagagggaagag
ctggacgagcagcaggaggagtaccagcagagtttggagcggctcagggagggccagagg
agcgtggagagggagcgagagcgtctggagggccagcagaagctgctccagacgtggacg
cacggccgccagaggagcctgcccactgtgattccacacatggtcatacctctagatgtg
cagcaggactcggcacccagtcagtcaagggacctcggcggtaacggctccatgtttgtg
aacgaggctgcgttcgccagcaccagcatcaacaaccgccacgtccaccacaaaaagaat
gaccccagcaaacataattgtctcaacaccctgctggccaggtccaacagcagacagccc
cccatagctaagaccccccatagtcctcactcagactcccagggatggatgatggggacg
gggtacctctacagccctgcaggaaagctgggactgcagcacacacccactgatcatagc
agtcacagctacatcggggagacctggttgtcgagagcaagtggagctgatctgtatccg
gagctcccgcatcccagagaccctcagctggacctcagtgcgctggtttccttggagact
gacagcggcggggaggagggcagggaagaaaccatagtgtacctctga
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integrated database retrieval system
