Hippoglossus stenolepis (Pacific halibut): 118098038
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Entry
118098038 CDS
T08308
Symbol
pum3
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118098038 (pum3)
03009 Ribosome biogenesis [BR:
hsp03009
]
118098038 (pum3)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118098038 (pum3)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118098038 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
118098038
NCBI-ProteinID:
XP_034997321
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All DBs
Position
18:2052987..2058514
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AA seq
669 aa
AA seq
DB search
MEAKSPKPFSPKGGKKFSQKGKDSIGTKLGGKPGGKLGGKPGGKPGGYLGGKPGGKKPFK
PYNNAEKKSRPGQGIYDGKNPKLGFSKPNLEKVKKRKIKPAKDEEGEAPGAKKAKKGEFQ
PKKEMTEEEIKKNRQQMKKDLKKNRQQAERKDMFEIICHAKQVWGSLRRKKCDEDVKKKL
MKELHDLIRGKTKQMAFAHDSVRVLQCFLQFGSHEQRREVFDELKDDVIGLCKSQYGRHV
VKKLLMYGNKELLAAVIQTFKGHVRTMLRHSAASSIIEYAYNDKAVLAQRLMLTEELYGT
TFIVCKSSVCNTIEKVAEANPGKLNNIIDEMKQSLTPMATKEQVIKHSLVHKVFLDFFLF
SPEKPRTEMIESIRESVVYMAHTHDGARVAMHCFWHGTAKDRKVIIKTMKTFMVKFATGE
FGHLVLLALFDSVDDTKLVKQAVLSEILLSLDEVINNKYGKKVLLYLLSPRDPAHLLPEI
IKVLEKGDGNAHSKKEPAIRRKELLEVVSPLLLDYLRDNAGTMVMVKSTSVTVSDILASA
CGDLRPAMTAVAQLANEELVPGGIDGRLHMAEHPAGHLVLKWLIEQDMTLSEAEKEERFG
RILVDTVGTDKMKSWVKVNRGAMVLCSLLNSCDKSVSAEVKEALRSITSQLSSITNNKGA
EILLENLNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaaatccccaaaacccttttctcctaaaggtggaaagaagttcagtcagaaa
ggaaaagactccatagggaccaaactgggaggaaaaccaggcggtaaactgggcggtaaa
ccaggaggtaaaccaggtggttatctgggcggtaaaccaggcggtaagaaaccctttaag
ccgtacaacaacgcagagaagaagagcaggccggggcaggggatttatgacggcaaaaac
ccgaaacttggtttctccaaaccaaatttggagaaagtgaagaagaggaaaatcaaacca
gcgaaagatgaagagggcgaagctccgggagcgaagaaggcgaagaaaggagagtttcag
ccgaagaaggagatgacggaggaggagataaagaaaaaccgtcagcagatgaagaaggac
ctgaagaagaacagacagcaggcggagaggaaggacatgttcgagatcatctgtcacgcc
aaacaagtgtggggaagcctccggaggaagaagtgtgacgaggacgtgaagaagaaactt
atgaaagagcttcatgatctgatccgtgggaaaaccaaacagatggcgtttgctcacgac
tcggtgcgagtgctgcagtgcttcctccagttcgggagccacgagcagagaagggaagtg
tttgatgaacttaaagatgatgtcattggtttgtgtaagtctcaatatggccgacatgtg
gtgaagaaactgctgatgtacgggaacaaggagctgttggcagctgtgatacaaacgttt
aaaggtcacgtgcgcacgatgctgcgtcattccgccgcctcgtccatcatcgagtacgcc
tacaacgacaaagccgtgctcgcacagagactcatgctcacggaggagctgtacggcacc
accttcatcgtctgcaagtcctcggtgtgtaacaccatcgagaaggtggcggaggcgaac
cctggaaagttgaacaacataatcgacgagatgaagcagagtctcacacccatggccaca
aaggagcaggtgatcaagcactcgctggttcacaaggttttcctggatttcttcctgttc
tcacctgagaaaccgagaacggaaatgatcgagtccatcagagagtcggtcgtctacatg
gctcacacacacgacggagcacgagtggctatgcactgtttttggcacgggacggccaag
gacagaaaagtcatcatcaaaactatgaagacgttcatggtgaagtttgcgacgggggag
ttcggtcacctggttcttttggctctattcgacagtgtggacgacaccaagctggtgaaa
caagccgtgctctcagagatcctgttgtctctggacgaggtcatcaataataagtacggt
aagaaggttctgttgtacctgctgagccccagagacccggctcacctgctgccagagatc
atcaaggtgctggagaagggagacggaaacgctcacagtaaaaaggaacctgccatccgg
aggaaggagctgctggaggtcgtctccccgctgctgctggattatctccgggacaacgct
ggcaccatggtgatggtaaagtccaccagcgtcaccgttagcgacatcttggcatcggcc
tgcggggacctgaggcccgccatgacggccgtggctcagctggccaacgaggagctggtg
ccgggagggatagacggtcggctccacatggccgaacatcctgcaggacacctggtgctg
aagtggctcatcgagcaggacatgacgctgtcggaggcagagaaagaagagcggttcggc
aggatactggtggacacagtgggaacagacaaaatgaagagctgggtgaaggtgaacaga
ggagccatggttctctgcagcctcctgaacagctgcgacaagtccgtgtcggcggaggtg
aaggaggctctgaggtccatcacgtcccagctcagcagcatcaccaacaacaaaggggct
gaaatcctgttggagaacctgaacaagtag
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