Hippoglossus stenolepis (Pacific halibut): 118098159
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Entry
118098159 CDS
T08308
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X2
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03440
Homologous recombination
hsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118098159 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118098159 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118098159 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118098159 (brcc3)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118098159 (brcc3)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118098159 (brcc3)
Peptidases and inhibitors [BR:
hsp01002
]
Metallo peptidases
Family M67
118098159 (brcc3)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118098159 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
118098159 (brcc3)
BRISC complex
118098159 (brcc3)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
118098159 (brcc3)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118098159 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
118098159
NCBI-ProteinID:
XP_034997591
LinkDB
All DBs
Position
18:2039224..2041135
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVEGSRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLADMTGRTMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQCFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERVEIPIHVVPREAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLAHLDPVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNK
QSIVELQREKEALLQELAAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcgcggtccacctggagtccgacgccttcctggtgtgcatgaaccacgcg
ctgagcacggagaaggaggaggtgatgggcctgtgcatcggggaggtggagggctcccgc
atcgtccacatccactccgtcatcatcctccgccgctcggacaagaggaaggaccgggtg
gagatctccccggagcagctgtccgcggcctccacggaggcggagcggctggcggacatg
acgggccggacgatgcgggtggtcggctggtaccactcccacccgcacatcaccgtgtgg
ccgtcccacgtcgacgtgcgcacccaggccatgtaccagatgctggaccagtgcttcgtg
ggcctcatcttctcctgcttcatcgaggacaagaacacgaagacgggccgggtgctgtac
acctgcttccagtccgtgcaggcgcagaagggctccgagtacgagcgggtggagatcccc
atccacgtcgtgccccgcgaggccatcggcaaagtgtgcctggagtccgccgtggagctg
ccgcggatcctgtgccaggaggagcaggacacgtaccgcaagatccacagcctggcgcac
ctggaccccgtcaccaagatccacaacggatccgtgttcaccaagaacctgtgcagccag
atgtcggcggtgagcggcccgctgctgcagtggctggaggaccggctggagcagaacaag
cagagcatcgtggagctgcagcgggagaaggaggcgctgctgcaggagctggcggctctg
tga
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