Hippoglossus stenolepis (Pacific halibut): 118098179
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Entry
118098179 CDS
T08308
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04144
Endocytosis
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118098179 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118098179 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
118098179 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118098179 (nedd4l)
04121 Ubiquitin system [BR:
hsp04121
]
118098179 (nedd4l)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118098179 (nedd4l)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118098179 (nedd4l)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
HECT type E3
118098179 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
MUG113
Motif
Other DBs
NCBI-GeneID:
118098179
NCBI-ProteinID:
XP_034997631
LinkDB
All DBs
Position
18:12387117..12432133
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AA seq
1286 aa
AA seq
DB search
MAQRLRLYFGSGRSNTAPEILEGDCEDHDNDVVTPLSMQPPQESRPSLVQTAQRVPPRAF
GSLSEPLLKRSSSMFIPQLAAYTDPRPTKSSSMQISLQRSNGSSNGDSIGPADDIPPPSY
TPPGPAPAYTEPQIQTDVPLHPPPPYCSPASFNSQTSLTEPNLSKRRVFSIGSNEHTVYS
KGQPGISVGGICIQRNSPDGSDVQHFRILPYGGTGWSVQQQSSDHCSGVNGGTKRLVFQL
QQNQDQDQSQGAAASPEECTDDGHASLRAGRAVRYPKIRLERRSSYQRLLLENQHQKSGA
DSQAIEETQTDMETQRMEARNRSNGCTFKISGDTPRRQPHFKIYFTSGGGGDQDVNLCND
STRNNPKTRDDFLGQVDVPLSHLPTEDPAMERPYTFKDFLLRPRSHKSRVKGYLRLKMAY
LPKQGGPEEEAGEVREEAEGWDESADSGSQRPQQLLPPMPPGWEEKVDNLGRTYYVNHNN
RSTQWKRPSNIELISETESDDQQRQINQEAHRVFRSRRHISEDLENEHLEPRDMDNSWEL
ITEEDPSDSSPPSLPGPSSILTPQPPPTAASQEFSEDLNLRLSLTPDTNGEVPGPSSALG
QLSNRLRSSSMTDGVSDQAQPPPLTQSSQTRRTRAQTVSGGEESMSPSSTAYTLTTPGLP
PGWEERKDAKGRTYYVNHNSRNTTWTRPIVQLTEDGASTSAAASSSSSAAAASSSAASAS
GGASALPPPATPSSSNASNNHLHEPLVRRPRSLSSPTVTLSTPLEGANNIQVRRAVKDSV
SNPQSPQPSPYSSPKSQHKTQQSFLPPGWEMRIAPNGRPFFIDHNSRVTTWEDPRLKYPV
HMRNKNSMEPGELGPLPNLPEEPGWEERVHSDGRTFYIDHNTKNTQWEDPRLQSPAITGP
AVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSLKRPDVLKARLW
IEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSY
FKFIGRVAGMAVFHGKLLDGFFIRPFYKMMLGKQISLKDMESVDSEYYNSLKWILENDPT
ELDLRFCIDEDNFGQTYQVDLKPSGSDMVVTNDNKKEYIDLVIQWRFVNRVQKQMNAFLE
GFTELIIIDLIKIFDENELELLMCGLGDVDVNDWRQHTVYKNGYCPNHPVIQWFWKVVLL
MDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPEKLPRAHTCFNRLDLP
TYESFEDLREKLLMAVENAQGFEGVD
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacgtctgcgtttgtactttggatcaggccgcagtaacacagccccggagata
ctggaaggagactgtgaggaccacgacaacgacgtggttacaccgctcagcatgcagcca
cctcaagaatcaaggccttctctagtgcaaactgcacagcgcgtcccaccaagggctttt
ggttcgctctctgagcctttgcttaaacgcagctcctccatgttcataccccagcttgct
gcctacactgacccacggcccactaagagctcctccatgcaaatctccctgcagcgttcc
aatggatcaagtaatggagattccattggccctgcggatgatatcccgccacctagttat
actcctccaggacctgcgcctgcctatactgaaccacagattcaaacagatgttccacta
catccgcctcctccatactgcagcccggcttctttcaactcgcagacttctctgacggag
ccgaacttgtccaaacgcagagtctttagtattggttcaaatgaacatactgtgtacagc
aaaggacaacctggtatcagtgttggtggaatttgcatccagaggaactcccctgatggt
tctgatgtccagcatttcagaatccttccttatggtggtactggctggtccgtccagcag
cagagctcagaccattgctctggtgttaatggtggaacaaagagattagtgtttcagctc
cagcaaaatcaggaccaggaccagagccagggtgctgctgcatcaccggaagaatgcaca
gatgatggccatgccagcttaagggctggccgtgcggtccgttaccccaaaattcgactg
gagagaaggtcatcttatcagaggctgctgctggagaatcaacatcagaaaagtggcgca
gatagccaagctatagaggagacccaaacagacatggagacacagagaatggaagcaaga
aacagatccaatggttgtactttcaaaatcagtggagatactcctcgaaggcagcctcat
ttcaagatatattttacctcgggtggagggggagatcaggatgtgaacctttgcaatgat
tccacgaggaataatccgaagaccagagatgatttccttggtcaggtggatgttccactc
agtcatctgccgacagaggacccggcgatggagcgtccttacacgtttaaagacttcctc
ctgcggcccagaagtcacaagtccagggtgaagggttacctgcgactgaagatggcctat
ctgcccaaacaaggaggacccgaggaggaggccggagaagttagggaggaggctgaggga
tgggatgagtctgcagactcaggctcccagcgaccgcaacagctgctgcccccgatgccc
ccaggctgggaagagaaggtggacaacctgggacgcacctactatgtcaaccacaacaac
cgcagcacacagtggaaacggccctcaaacatagaattgatttcagagactgagagtgac
gatcaacagcggcagatcaaccaggaagctcaccgtgttttccgatcgagacgccacatt
agtgaagacctggagaatgagcacctggaacccagggacatggacaattcctgggagctc
atcacagaagaagatcccagcgacagctcgcccccgtctctacccggcccctcctccatc
ttgacaccgcagcccccaccaacagccgcctcacaggagttttcggaagatttgaatctg
aggctgtcgctcactcccgataccaacggggaagtaccagggccgagctctgctctgggc
cagctgtcaaacagactccgctcctctagtatgacggatggcgtcagtgatcaagcccag
cctcctcctctcacgcagagttcccagaccagaagaacaagagctcaaacagtctcaggt
ggtgaggagtctatgtctccctcgtcgactgcttacaccttgaccacccctggcctgccc
cctggatgggaggagaggaaggacgccaagggaagaacttattacgtgaaccataacagc
cgcaacacaacctggactaggccaattgtgcagctgactgaagacggagccagcacctca
gcagcagcatcatcatcatcatcggcagcagcagcatcatcctcagcagcatcagcgtca
ggaggagcctcagccctgccaccccctgccaccccctcctcctccaatgcctccaataac
cacctccatgaacccctagtccgacgacctcgtagcctcagctctcctaccgtcaccctt
tccacccccttagagggagccaacaatatccaggtacggagggctgtgaaggactcggtc
tccaatccccagtcacctcaaccctccccctacagttcccccaagtcccagcacaagacg
cagcagagcttcctgcccccaggctgggagatgaggatagcccccaacggacggcccttc
ttcatcgaccacaacagcagagtaaccacctgggaggatcccagattgaaatacccagta
catatgaggaataagaactcaatggagcctggtgaacttggtcctcttcccaacctacca
gaggagcctggatgggaagagagagttcactcagacggacgcactttctacattgaccac
aataccaagaacacgcagtgggaggaccctcgactgcagagtccggctatcacaggacct
gctgttccctactccagagagttcaagcagaaatacgactacttcaggaagaaactgaag
aaacctgctgacatccccaaccgattcgagatgaaactgcacaggaacaacatcttcgaa
gagtcgtaccgtcgcatcatgtccctgaagaggccggatgttctgaaggcacggctgtgg
atcgagttcgagtcggagaaagggttggactacggcggcgtggccagagagtggttcttc
ctcttatctaaggagatgttcaatccttactacggcctgtttgaatactctgccacggac
aactacactcttcaaattaatcccaactcgggcttgtgcaacgaggatcatctctcctac
ttcaagtttatcggacgtgtggcaggaatggctgtgtttcatggaaaactactagatggt
tttttcatccgaccattttacaagatgatgctgggaaaacagatctctcttaaagacatg
gagtctgtggacagtgaatactacaactctctaaagtggattctggagaatgatcccact
gagctggacctgaggttttgtattgatgaagacaactttggacagacataccaggtcgac
ctgaagcccagcggctcagacatggtcgtcaccaatgacaacaaaaaggaatacatagac
ctggtcatccagtggaggtttgtcaatcgggtccagaagcagatgaacgctttccttgag
ggattcactgagctcatcataatagatctgatcaagatctttgatgaaaacgaactagag
ctgctcatgtgtggtctgggtgatgtcgacgtcaacgactggagacaacacactgtttac
aagaatggatactgtcccaaccatcctgttatacagtggttctggaaggtcgttctgttg
atggatgctgagaagagaatccggctcctccagttcgtgacgggaacatctcgagtacca
atgaacggctttgccgagctttatggttctaatggtcctcagctgttcaccattgagcag
tggggaacaccagagaagttgccaagagctcacacatgtttcaaccgcttggatctgcca
acctacgagtcctttgaggacctgagagagaaactcctcatggccgtggaaaacgcgcag
ggcttcgagggagtcgactaa
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integrated database retrieval system
