Hippoglossus stenolepis (Pacific halibut): 118098246
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Entry
118098246 CDS
T08308
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118098246
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Major cadherins
118098246
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Stevor
DUF443
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
118098246
NCBI-ProteinID:
XP_034997756
LinkDB
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Position
19:complement(17977432..18064505)
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AA seq
804 aa
AA seq
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MLTRDCLLLFLWILVNAGSVSSLRPPSPPLGRSRTGREHARSLVGPMRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGDSVVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDMSSNRPLEPESEFVIKVQDINDNEPKFLEGPYRASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIRTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFSKSFFHLRVPESSALGSAVGRIKAHD
LDIGRNAEVEYTIVPGDGGAMFDITTNSHNQEGIIILKKPLDYESKKAYTFKVDATNAHL
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVHEDTPAGTIIGAVTAQDLDASS
SPVRYSIDWKSDMDSYFDIDPVEGTISTNEQLDRESIAQHNISIVATKLNSPVLTSRVAV
TVHVLDINEFPPELSSPYETFVCENAKMGQVIQTFGAKDQDLPPSGQHFSFKSPKEDFKS
NKNFTIRDFGNNTAGIVTKRNGFRRRLQEIYFLPVLIEDNGYPPKSSTGTLTIRVCGCES
DGSLLTCSAEAIFLPVGLSTGALIAILLCIIILLVIVVLYVGLRRQKKKETLMSSKEDIR
DNVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLFRRDVKPELKRDPRPPVSQDSADIRD
FINQRLTEHDMDNSAPPYDSLATYAYEGGGSVAESLSSIESLAVDLEEDYDYLNDWGPRF
KTLAGIFGEQSETQSDSTTTENTH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaagggactgcctgctgctgttcctgtggatcctcgtcaacgcaggctcagtc
tcttctttgcgtccaccctcaccgccgctgggacggagcaggacggggagggagcacgcc
aggagcttggtgggcccgatgaggaatggggcggctggatttcagcgggtcaaaaggggc
tgggtgtggaaccagttctttgtactggaggagtacatggggtcagacccgcagtacgtg
ggaaagctgcacactgaccttgataagggggacagtgtggtgaagtacactctctcgggg
gacggggccggctccattttcacaattgaccagacaacaggggacatccatgccttaagg
agtcttgacagggaggagaagccttactacaccctgcgcgcccaggctgttgacatgagc
tccaatcggccgctcgagcccgaatctgaatttgtaatcaaggttcaagacatcaacgac
aacgagccaaagttcctggagggaccgtaccgggccagcgtccccgagatgtcaccagta
gggacgtatgtgacacaagtgacagccacagacgcagacgaccccacgtacggaaacagt
gcgagggtggtgtacagcatcctccacggccagccgtacttctctgtcgacccgaaaaca
ggggttataaggacagccttgcccaacatggacagagaggtgaaggaacagtaccaggta
ttaatccaggccaaggacatggggggccagctgggggggctggccggtaccaccaccgtc
aacatcaccctcagcgacgtcaacgataacccgccccggttctcgaaaagtttctttcac
ctgagagttcccgagtcgtccgcgctggggtcggctgtgggaagaatcaaggcccacgac
ctggacatcgggaggaacgccgaggtggagtacaccatcgtgccaggcgatggaggcgcc
atgttcgacatcaccaccaacagccacaaccaggaggggatcatcattctcaaaaagccc
ctggactatgaaagcaagaaggcgtacacctttaaagtagatgccaccaatgctcatctg
gatccgcgattccagagctttggggccttcaaagacacagcaaccgtgaagattaacgtt
ttggatgtggatgagcccccggtgttcaataagccttcatatgtgatggatgtgcatgag
gacacacccgcaggcaccatcattggagcggtgacggcacaggatttagatgccagcagc
agtccagtcaggtattccatcgactggaagagcgacatggacagctactttgacatcgat
ccagtggaggggacgatttccaccaacgagcagcttgacagagagagcatcgcccagcac
aacatctccatcgtggccaccaaacttaatagccccgtgctgaccagtcgagtcgccgtc
accgtccacgtcttggacatcaacgagttcccgcctgaactctccagtccttacgagacc
ttcgtgtgtgaaaatgctaaaatgggacaggtgattcaaacctttggtgcaaaagaccag
gacctcccgccgtctggacaacatttctccttcaaatcgccaaaggaagatttcaaaagc
aacaagaatttcaccatccgagactttggaaataacacggctggaatcgtaacgaagcgg
aacggctttagacggcgtttacaggagatctatttccttcccgtgctgattgaagataat
ggctacccacccaagagcagcacaggcaccctgaccatccgcgtgtgtgggtgcgaatct
gatggatccctgttgacctgcagcgcagaggccatcttcctgcccgtgggtctcagcacc
ggcgctctgattgccatccttctttgtatcatcatcctgttagtgatcgtggtcctctac
gtgggcctgaggaggcagaagaaaaaggaaactctcatgtcatccaaagaggacatccgc
gataacgtcatccactatgacgacgaaggaggcggcgaggaggacacacacgccttcgac
atgggaacgcttcgcaatcccaaggtcgtcaaagagaacctgttccgcagggacgtcaaa
cccgagctgaagcgagatccccggccgcccgtctctcaggacagcgccgacatccgagat
ttcatcaaccagcgcctgacggagcacgacatggacaactcggctcccccgtacgactcc
ctggccacgtacgcttacgagggcggcggctcggtggccgagtcgctcagctccatcgag
tccctcgccgtggacctcgaggaggactacgattacctcaacgactgggggccccgcttc
aagacattggcggggatatttggggaacagtcagaaactcagtcggactcaacaaccaca
gagaacactcactga
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