Hippoglossus stenolepis (Pacific halibut): 118098321
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Entry
118098321 CDS
T08308
Symbol
si:ch211-230g15.5
Name
(RefSeq) LOW QUALITY PROTEIN: polyhomeotic-like protein 3
KO
K11458
polyhomeotic-like protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118098321 (si:ch211-230g15.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118098321 (si:ch211-230g15.5)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
118098321 (si:ch211-230g15.5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
zf-FCS_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
118098321
NCBI-ProteinID:
XP_047193820
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Position
19:19561325..19571825
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AA seq
1114 aa
AA seq
DB search
MDRELLRPTQSNHGGATNGTSPQASSATTVDSSSSPTTPTPPRLTPNPLLLDSPAPTLTP
TTSSPPPPLTPAPSVSGTHGPKVAAASPHILVPAPPKLSSTVTPALRTYSRPILPSPTTG
VSKTSPPAQASASSSLLPPSAPSSSHAVSTTASPLVSSSSTAMSTKTSTSLTNGNMRPGS
TPTSTPITPFHTPASPPGRQVSQAHPVVSPGLVRANQIPSPVRQRVSQQTLLLGKGLKGS
GPDQVLLRAQMLILTSAMRPAPSSSSSSSCSSSPSSSPASAQLQSLTLRPPHPRALAIPP
TLRLKPTSSAPPPLSRPHAPLFPPLRPRPQPSTTATESPTTPCRHLSVPPPTLYSPVRAV
PLRPRLHSPNGHRATSPRQTSILKPIAAAPSSQAPPIISRPLCRLKNCPLTQTVLGPGQS
QHSSLSMTNPSSPFEHSPSAARQLQIIALSSGRQPQPGVYGHASVQSPPPVAEPPELSSQ
SRRTLSSEDVLPLPLNPSLPKTTSPLPSPPSLLSPASPPSQAGAQSQTLVQRGETKESEE
QRDRGRGLRHGIRDEGSVDLRVEKDDQRERAKEEKARLPTQKEISQKEQEAAMGREEVEM
EVTEEGQGDGERGEDSEEEKMEEEAESAMDRSEKLNTNQLLHQHQNTDPIPTPDAVKDSS
VELKPPLGLILASAPVQASVPPPVPGPPPVPEASVQRLQESHREPQAVSQEDFCENMSTQ
SDNQSALSSLSSQSPPSSPFITPAAENPPLLLPTHSAHTADLGPSRHEPQKVEEPVEESQ
HPAESESEPHGQSEDESESFGSPWEPRAWPEGRLVLTHLVXGFVIQEGLQPFPVNRSSLL
VPEQVTTPQEVNGTNGRAALPVTDTPKQAEHSTDSDEEDGGDTDDPGTRSAPRDRTVLHC
QFCGKRGHAHNFMRSKRFCSTSCARGFNVRLTKRLRALSAGSRSERPRPALNRAESVPGK
PLLLRLPRDLWSAGRREKEGKERPPAAEEEEEDMEEDMEGGGEEEGEDGGEQDPAVAVTA
RMERRAARRARRASAPATTTSTPTTTFKPAPSQWSVEDVTAFIHTLPGCSDVAEAFRLQE
IDGQALLLLTEDHLMTSMNIKLGPALKICAHIKR
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggagctgcttcgaccgacccagtccaaccacggaggcgccaccaatggaacc
agccctcaggcctccagtgccaccacggtcgactcctcctcctcccccaccactcccacc
cctcctcggctcacacccaaccccctgctcctggactccccagcgcccacgctaacaccc
accacctcctcccctcctccccctctcacccctgctccctccgtctctgggacccatggc
cccaaggtggcggcggcgtctcctcacatccttgtccctgctccccctaaactcagctcc
accgtgacccccgccctccgcacgtactctcgtccgatccttccctcccccacgacgggt
gtctccaaaacatctcctcctgcgcaagcctctgcttcgtcctcccttctccctccatcc
gccccttcctcctctcacgctgtcagcaccacggcctcccctctcgtctcctcctcctcc
accgccatgtcaacaaagacctccaccagccttaccaacgggaacatgaggcccggatca
acgccaacctccacgccaatcacgccatttcacacaccagccagtccacctggccgacag
gtgtctcaggctcatcctgtggtctcacctggtcttgtgcgagccaatcagatcccctcc
cctgtcaggcagagggtatcccagcagacactgctcctggggaaaggtctcaaagggtct
ggcccagaccaggtgctgcttagagctcagatgctgattcttacttctgccatgcgaccc
gccccatcttcctcctcttcttcctcctgctcttcctccccgtcctctagccccgcctcc
gctcagctccagagtctcaccctgaggcctcctcacccccgggccctcgccatccccccg
acgctccgtctcaagcccacctcctcagctccgccgcccctctctcgccctcacgcgccg
ctcttcccccctctcaggccacgaccacagcccagcaccacggcaacggagagcccgacc
acgccctgccgccacctctctgtcccgcctccaactctctactctcccgtccgagccgtc
cctctgaggcccagacttcactctccaaacggtcacagagcgacgtcgccccggcagacc
tccatcctcaagccaatcgctgctgctccctccagtcaggcccctcccatcatcagcagg
ccgctgtgcagactgaagaactgtccattaactcaaactgtgctcggtcccggccaatca
cagcacagctcgctgtccatgaccaatccttcttcccccttcgagcactcaccgtctgca
gcgcggcagctgcagatcattgccctctcctccggccgccagcctcaacccggagtgtac
ggccacgcatcggtgcagtcgccacctccggttgcagagccgccggagctttcaagccaa
tcaaggcggaccctgagcagcgaagatgtgcttcctcttcctctcaacccctcgttgcca
aaaacaacctctcctctgccctcgcctccgtctctcctgagtccggcctctccgccgagt
caagctggagctcagtcacaaactctggtccagagaggagagacgaaggagagcgaggag
cagagagaccgagggcgagggctgcgacacggaatcagagacgaggggagtgtcgacctg
agggtggagaaagatgaccaaagagagagagcgaaggaggagaaagcacggctcccgacc
cagaaggagatcagtcagaaagagcaggaagctgcgatgggcagagaggaagtagaaatg
gaagtgacagaggaaggtcagggtgacggagagagaggagaggacagcgaagaggagaag
atggaggaggaagcagagagcgccatggaccggtctgagaagctgaacaccaatcagctt
ctccatcagcaccagaacacggatcccatcccgacgcctgatgctgttaaagactccagc
gtggaactcaaaccccccctgggtcttattctggcctcggccccggtccaggcttcagtc
ccgccccccgtcccaggaccgcctcctgtcccagaggcgtccgtccaaaggctgcaggag
tctcaccgagagccgcaggccgtcagtcaggaggacttctgtgagaacatgtccacgcag
tccgacaaccagtcagctctgtccagcctctcctcccagtcccccccctcctcacccttc
atcacccccgccgcagaaaaccctcccctcctcctccccactcacagcgcccacacggcc
gacctgggaccgtcgcggcatgagccccaaaaggtcgaggaaccggtcgaagagtcgcag
cacccggcggagagcgagagcgagcctcacggccaatcagaggacgagtcagagagcttc
ggcagcccctgggagccgagggcgtggcctgagggacgactggttctgactcacctggtg
ngagggttcgtcatccaggaggggctccaaccgtttcctgtgaaccgttcgtccctgctg
gttcctgagcaggtgacaacgccacaggaagtgaacgggaccaatggcagggcggcgttg
cctgtgacggacacgccgaaacaagccgagcactccaccgactcagacgaggaagacgga
ggcgacacggacgaccccgggacgaggtcggctcccagggaccgaacggtgcttcactgc
cagttctgtgggaaaagaggccacgcccacaacttcatgcggtccaaacgcttctgctcc
acttcctgtgcgcgcgggttcaacgtacgtctgaccaagcgcctgcgggctctgagcgcc
ggcagccggtccgagcggccccggccggctctgaaccgggccgagtcggtgcctgggaaa
cctctgttactgcggctgcctcgtgacctgtggagcgcaggtcgccgggagaaggaggga
aaggagaggccgccggcggcagaagaggaggaggaggacatggaggaggacatggaggga
ggaggagaggaggaaggtgaagatggaggagagcaggatcctgccgttgccgtgacagcg
aggatggagcggcgggcggctcgcagggcgaggagggcgtccgcacctgccacgaccacc
tccacacccacgaccacattcaagccggccccctctcagtggagcgtggaggacgtgact
gccttcatacacacactgccaggctgcagtgacgtggcggaggcgttccggctgcaggag
atcgacggccaggctctgctgctgctgaccgaggaccatctgatgaccagcatgaacatc
aagctgggaccggctctcaagatctgtgctcacatcaagcgctga
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