Hippoglossus stenolepis (Pacific halibut): 118098341
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Entry
118098341 CDS
T08308
Symbol
ssr1
Name
(RefSeq) translocon-associated protein subunit alpha isoform X1
KO
K13249
translocon-associated protein subunit alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118098341 (ssr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118098341 (ssr1)
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
118098341 (ssr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_alpha
Nop14
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
118098341
NCBI-ProteinID:
XP_034997944
LinkDB
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Position
19:complement(19841078..19847528)
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AA seq
297 aa
AA seq
DB search
MKFLPKLLLLALLAFPAALLTRGPVVSAQDLTEDEEAEAVEEDVVDDVTAEDEDDEAEVE
DDDNVELTEEKEEEEEEALVGEVKASPNADTTILFVKGDDFPANNIVKFLLGFTNKGPEE
FVVESLDASFRYPQDYQFYIQNFTALQLGTVVPASKQATFEYSFIPAEPMGGRPFGLVIN
LNYKDGSGNIFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLVIVGLHQLMESRKR
RRPAPKVEMGTSSHSDVDLSWIPQETLNQIMQSRRDKASPRRSPRKRNQKRSAGSDE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcttcccaaactgctgctgctcgcgctgttagccttcccggctgcgctgctc
accagagggccggtggtgagtgctcaggatctgactgaagatgaggaggctgaggccgtg
gaggaagatgttgtggatgatgtgacggctgaagacgaggacgatgaagcggaggtggaa
gatgatgataatgtagagttgacggaagaaaaagaagaggaagaggaggaagcgttggtt
ggagaggtgaaggcttcccccaacgctgataccaccatcctgtttgtcaaaggagatgac
ttcccagccaacaacatcgttaagttcctgcttggcttcaccaacaagggaccagaggaa
ttcgtggtggagtcactggacgcttctttccgttacccacaggattaccagttctacatc
cagaacttcaccgctctgcagctcggcaccgtggttcctgcgagcaaacaggccacgttc
gagtactccttcatccccgctgagccaatgggggggcggccattcggactcgtcatcaac
ctcaactacaaggacggcagtggaaacattttccaggatgcagtgttcaaccagacggtc
acgatcactgagagagaagacggactggacggggagacgatcttcatgtacgtcttcctg
tcgggcctcgggctgctggtcatcgtcggccttcaccagctgatggagtctcgaaagagg
aggcgtccagctccaaaggtggagatgggaacctcgagccacagcgacgttgatctgagc
tggatccctcaggaaacactcaaccagatcatgcagagtcgcagagacaaagcgtctccg
agacgatctcctcgcaaaaggaaccagaaacgctcggccggctccgacgagtga
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