Hippoglossus stenolepis (Pacific halibut): 118098443
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Entry
118098443 CDS
T08308
Symbol
nrros
Name
(RefSeq) transforming growth factor beta activator LRRC33
KO
K26317
transforming growth factor beta activator LRRC33
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118098443 (nrros)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_LRWD1
LRR_14
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
118098443
NCBI-ProteinID:
XP_034998144
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Position
19:complement(7117269..7123608)
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AA seq
684 aa
AA seq
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MPVHGLTPILLCLLHVWIIPSPASSHPQLSECRLIQRTALCNDAKLSSVPPGLPRNIEEL
QLNYNHIQTLQDDSLLRYPSLTSLSVACNSLEKLESNTFQDLSLLESLNLANNNLYIGYP
ETSQALKKLPGLKVLDLSENKLEDEMAATLLQNLTSLEYLNLSGNLLRRLDETSFRDLNK
LKELNLQRNIIFEIDGAFASNSKLQRLNLAFNNLPCLTDFHMTHLVVLNASHNFIEWFIS
RQDLNDTFQLETLDLSDNKLLFFPFLPSHSHLRNLYLSHNSLRFYEQLADNATSPNATTT
VEFYNLRKYASNVTAELWDDSLHGDVSSLEILDLRGNQVEYFPYGFIQKMPFLSRLQMCT
NCLKSLNLTYEQFPGSLYELDISNNRLKQVVADEGTLAVLGNLTYFNLSLNDLEWLPPRF
FSSLPSLRSVDLSYNHIDICLSEEAEISTDLVSSCVDWRNVVSLGQLYLKGCNLELIPSS
AFAGLSLTHLELSDNPGLVLQSIQSLSRTLQHLGLGNTHIQDFDFSHLKNLKFLNISRNS
LAHLSPSLLTLDLKVLDLRDNRLSTIPHGLANALAPNLQIVFLTGNPFNCCQTEWFRAFE
KSKTIQMVGLSDIECEDPVRTQQLQHLESSVCFNEAGESIYWYILLFVSISLSFVGISVM
VLLTFKPQMLKKSIKKKCLKSTSY
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccggtccacggactcactcccatcctgctctgcttgttacacgtctggattatcccg
agcccagcatcgagtcatccacagctcagcgaatgtcggctgatacaaagaacagctctc
tgcaacgatgccaagctcagttctgtgcctccaggattaccacgcaacatagaggaactt
cagctcaactacaatcacatccaaacactacaggacgactctctgctccgttacccttca
ctaaccagtctgagcgtagcatgtaacagtttggagaaattagaatcaaacacttttcaa
gacttaagcttgttagaaagcctcaatttggcaaataacaacctgtatattggttaccca
gaaaccagccaggcattaaagaagctacctggtctcaaagttctggatctgtcagagaac
aaacttgaggatgaaatggcagccactcttctccaaaatctgacgtccttagagtacctc
aatctttctggaaacctcttgcggagattggacgagacctcattcagggacctgaacaag
ctaaaagagctcaacctgcaaaggaacatcatattcgagattgatggcgcctttgccagc
aattccaagctccagcggctcaacttggccttcaacaatctgccttgcctaacagacttc
cacatgacccacctagtggtcctcaatgccagccacaacttcattgagtggttcatctcc
agacaagaccttaatgacactttccagctggagacacttgatctttcagataacaaactg
ctcttctttcctttcttgcccagccatagtcacttacgcaacctttacctgtcccacaac
agccttaggttctacgaacaactggcagacaatgccacgtccccaaacgcaactacaact
gttgagttctacaacctgaggaagtatgcgagcaatgtgactgccgagttgtgggatgac
agtcttcatggggacgtctcttctctagagattttggatctaagaggaaaccaggtagag
tatttcccctacggattcatccagaaaatgcccttcctgtcaagacttcaaatgtgcacc
aactgtctgaagtccttaaatctaacttacgaacagttccctggcagcttgtacgagctg
gacatcagcaacaacaggctgaagcaggttgtagcagatgaaggaacgctggcggttctt
ggcaatctgacctacttcaacctgagcctgaatgatcttgagtggttacccccgagattc
ttttcctcactgccaagcctcaggtcggtggatctcagctacaaccacattgacatttgt
ctctcggaggaagctgagatcagtacagaccttgtctcatcttgtgtggattggagaaat
gttgtgtcccttgggcagctttacctcaaaggatgcaaccttgaattaattccatcgtct
gcatttgcagggttgtcgctaacgcacctggaactgtccgataaccctggacttgtccta
caatcaatacaaagcctcagcagaactttgcagcatctaggtttgggaaacactcacatt
caagactttgacttctcccatttgaaaaatctgaagtttttaaacatttcaaggaactct
ctcgcccacctttccccttcactcctaactcttgatctgaaagtgctcgacttgagggac
aacagactgtccactatcccccacggtctggctaacgcattagctccaaaccttcagatt
gttttcctcacaggaaatccgttcaactgctgccaaacagaatggttcagggcctttgaa
aaatcaaagacaatccaaatggtcggactatcagacatcgaatgtgaagatcccgtgcga
acacagcaattgcagcacttagagtcatctgtgtgttttaacgaagctggggaatctata
tactggtacattctgctcttcgtatccataagtctttcatttgttggcatttcagttatg
gttcttctcacgttcaagccccaaatgctaaaaaaatctattaaaaagaagtgtctgaag
tctacatcttattga
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