Hippoglossus stenolepis (Pacific halibut): 118098451
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Entry
118098451 CDS
T08308
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118098451 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118098451 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118098451 (si:dkey-37o8.1)
03012 Translation factors [BR:
hsp03012
]
118098451 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
hsp04131
]
118098451 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118098451 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118098451 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118098451 (si:dkey-37o8.1)
Translation factors [BR:
hsp03012
]
Eukaryotic type
Elongation factors
118098451 (si:dkey-37o8.1)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118098451 (si:dkey-37o8.1)
Exosome [BR:
hsp04147
]
Exosomal proteins
Proteins found in most exosomes
118098451 (si:dkey-37o8.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
Beta-prop_WDR75_2nd
Septin
Motif
Other DBs
NCBI-GeneID:
118098451
NCBI-ProteinID:
XP_034998159
LinkDB
All DBs
Position
19:15406700..15409187
Genome browser
AA seq
456 aa
AA seq
DB search
MVKEKAHVNLVVIGHVDSGKSTTTGHLVYKCGGIDQRKLEKFEKASAQMGKSSFKFAWVL
DKLKAERERGITIDISLLKFNTQKFTMTVIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEFEAGVSRSGQTREHALLAYTLGVKQMIVCVNKMDLTEPPYCQKRFDEVVRGVSGFLKK
IGYDPVTVPFVPISGWTGENMITATQKMPWFQGWKVRRREGNSSGRTLLEVLDSIQPPVR
TINKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMTLMFSPAKLTAEVKSIEMHHQGMQ
TALPGHNVGFNIKNVAVKNLRRGDVAGNAQQDPPSDVSSFEAQLIILNHPGKVKAGYSPV
LDCHTTHVTCRFAELKEKLDRRTGKKLEDNPQALVSGDAATVRLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVVKDHGSKPLKAQVCK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagaaggctcacgtcaacctggtggtcattggccacgtcgacagtggcaag
tcgaccaccaccggacacctggtctacaaatgtggaggcatcgatcagaggaagctggag
aagtttgagaaggcgtcggcacagatggggaagagttccttcaaatttgcctgggtgctg
gacaagctgaaggctgagagggagcgtggaatcaccatcgatatttcactgctgaaattc
aacacacaaaagttcaccatgacagtaattgacgctccaggccatcgagacttcatcaag
aacatgataaccggaacatcacaggctgatgttgccctcctggtggtctctgcagctaaa
ggagagtttgaggccggtgtatcgagaagtggtcagaccagagagcacgccctgctggct
tacaccctgggtgtcaaacaaatgattgtctgtgtgaacaaaatggatctgactgagccc
ccttactgccagaagcgcttcgacgaggtggtgcgtggcgtgagcggcttcctcaagaag
atcgggtacgaccccgtgaccgtgccctttgttcccatctctggctggactggggagaac
atgatcaccgcaacccagaagatgccctggttccaaggctggaaggtccgacggagggaa
gggaactcaagtgggagaactctccttgaagttctggactcgattcagcctcctgtgcgc
accatcaacaagcctcttcgattacctctgcaggacgtctacaaaattggaggagttggg
acagtaccggtgggcaagattgaaacaggcatcctcaaacccggcatgaccctgatgttc
tcccccgccaaactcactgccgaggtcaagtccattgagatgcaccaccaggggatgcag
acggccctgccaggacacaatgttggcttcaacattaagaatgtggccgtcaagaacctg
cggcgtggggacgtggccggcaacgcccagcaggaccctccatctgatgtcagcagcttc
gaggcccagttgattatcctgaaccatccagggaaggtgaaggccggatactctccggtc
ctcgactgccacaccacccacgtgacctgtcgctttgccgagctgaaggagaagctcgac
cgacgcacgggcaagaagctggaggataatccccaggccctggtgtcgggagatgctgcc
acagtcagactggttcccatcaagcccatgtgtgtggagagcttcttcacataccctccc
ttaggtcgctttgcagccagagacctgaagcagacagtcgctgtcggcgtcatcaagtca
gtggtgaaggaccatgggtctaaaccactcaaagcccaagtgtgtaaataa
DBGET
integrated database retrieval system
