Hippoglossus stenolepis (Pacific halibut): 118098458
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Entry
118098458 CDS
T08308
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03030
DNA replication
hsp03410
Base excision repair
hsp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118098458 (fen1)
03410 Base excision repair
118098458 (fen1)
03450 Non-homologous end-joining
118098458 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsp03032
]
118098458 (fen1)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118098458 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118098458 (fen1)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118098458 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
118098458 (fen1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
118098458 (fen1)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118098458 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
118098458
NCBI-ProteinID:
XP_034998171
LinkDB
All DBs
Position
19:complement(7632897..7638143)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLTKLIADQSPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAQAQEMGEQ
ENIDKFSKRLVKVTKHHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTNVLLRHLTSSEAKKLPIQEFHFNRILQDIGLTNEQFIDLCILLGCDYCGTIRG
IGPKRAIDLIRQHGSIEEILENIDTSKHPVPENWLYKEARGLFLAPEVVDCSTVDLKWVE
PDQEDLVQYMCNEKQFSEDRIRNGYKKILKSRQGSTQGRLDSFFSVTGSLSSKRKEPEVK
GSAKKKQKTGSTPGKFKRGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacacgggctcaccaagctgatcgcggaccagtcccccggagccatcaaggaa
caagacatcaagaactacttcggcagaaaaattgccatagatgcctccatgtgcatctac
cagttcctgatcgctgtgcgacaggacggaaacgttctgcagaatgaagatggagagacg
acaagccacctgatgggaatgttctaccggacgatccgcatgctggaacacgggatcaaa
cctgtgtacgtgtttgatggcaagcctccacagctcaagtcagcagagctggagaagaga
ggcgagaggagggcagaagctgagaagatgctcgctcaagctcaggaaatgggggaacaa
gagaatattgacaaattctccaaacgtctggtaaaagtcaccaaacaccataatgacgag
tgcaagaagctgctgaccctgatgggcgtcccctacatcgaggctccgtgcgaggcagag
gccagctgtgccgctctggttaaagcagggaaggtgtttgccacggcaacagaagacatg
gacggtctgacctttggcaccaatgtcctgctcagacacctcacctccagtgaagcaaag
aaacttccaatccaagagttccacttcaatcgaatcctgcaggacatcggcctgaccaat
gaacagttcatagacctgtgtattctgctgggctgtgactactgtggcaccatcaggggg
atcggccccaagagggccatcgacctgatcagacagcacggctccatcgaggagatcctg
gaaaacattgacaccagcaagcacccagttccagagaactggctgtacaaagaggccagg
ggcttgtttctggctcccgaggtggtggattgttccacagtggatttgaagtgggtcgag
cctgatcaggaagatctggtccagtatatgtgtaatgagaaacagttcagtgaggacagg
attcgtaacggctataagaagatcctgaagagtcgacagggcagcacacaaggacgactg
gactctttcttctcggtcactggatctctgtcctccaagcgaaaggaacctgaggtcaaa
ggatcggcgaagaaaaagcagaagactggatccacaccaggcaaatttaagaggggaaaa
tag
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integrated database retrieval system
