Hippoglossus stenolepis (Pacific halibut): 118098472
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Entry
118098472 CDS
T08308
Symbol
zcchc2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
118098472 (zcchc2)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
DUF6690
Motif
Other DBs
NCBI-GeneID:
118098472
NCBI-ProteinID:
XP_047200586
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All DBs
Position
19:3103539..3127474
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AA seq
1181 aa
AA seq
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MLKMKLPMKTGEEGEDEAVEDDSLDRSAHQRIPGAASPSPGSYGLEESPSQLDKETVFEW
FGLHLNPAKRVEFMCGLLHMCQPLELRFLGSYLEDLARKDYHVLRDFEFRANSPGDLGVL
TDVVDPVVRSKLLVCLSLLGSDSRECAGILFGILSHVDPALFYKHYDYSLLPFRGPHHQH
QHHPVHPPCQDGSVYGRSEQSCGFSASETAAGPLEQLALLFTMASLHPAFHFHQRETVRG
QLDKIELAIEERRRSQLRINAQTTELTGQKVDFLPPPALGLGECTASHPPCQSRRSSRWV
TQREAVHIEGIVLRGISRTRIDKEYNFEVKWSDSSSTCVTKTHLELENFLLKLPKDQCTE
SFEKSILRLLNQGDQYESREVEKNLREKFLSAPPVFRQTRKVCRFFNRDSTYSAKPTSCR
CNCQLGKVYQGDCSDASSQEEDLESYVQGHKKKHGTKSPSQGLSSAKASQGDSWRGGHTA
EVNGPAERRKKSCALRSSQEAEQVKHQDTEKRSHPVTKTKSRVLPSDRDKVKGKGAAFVT
NGSLVPALSSQRKDGGSGPDTFGETSSESYSSPSSPQHRGPESLDSEDDNNKDTDSHSDD
SSKGPGPDMFFTHQTVPAVVGDVSSVHSLSSLNHRPQMDPLCPESSTEFPPLSFMHSLPP
PSQSIAPDGKSSSGTMMMQMPLVPPAIPGPGIVGDPEKRDVLPTFGIPLIGVRPQGSLSV
QPFVQRFKTVLGGSNGASGSGSTVAMPQASHQAPVRAMSVMPPGPTSFSSPPQQPCQDPA
SVSSGLASSLPHVEPSHAKHPGLTLPSGLPSPYTLPPIPSSVMPAAGAPAATGVAPSSGH
VQAAVPPAVPTHTPGPAPSPSPALTHSTAHSECTSYSNSGSSCGSAAIAPGIPITLQQTQ
QQQVTPQQLTQPPQQQQQQQQQQQQQQQQQHQQQQQHQQQQQQQHQQQQQQQHQQQQQQQ
QPMGCGTCGCHNNCGGRSSNSSSVSGPPSCQAPLFFPAHQMAAAARQVFSVPPPLFQLTS
LCSNSYLTQAQPPHQANGAATLSPFFTTAPPPAHQSPYGPLHTHSHSHADVPSHMLGTQA
AAVAVAAAATYNLQQQMAPAASFCQRVYQHVYPNPLGMLPAATLGGGGVNKKSGNVSCFN
CGVSGHYAQDCNQPSIDSTQQGGFRLKYAASHISEAFDNAD
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatgaaactaccgatgaaaacgggcgaggaaggggaggacgaggcggtcgag
gacgattcattggatcggtcggcgcaccaacggattcccggggcggcatctccctccccg
gggtcctacgggctggaggagtccccgtcccagctggacaaggagaccgtcttcgagtgg
ttcggcctacatttaaacccggccaagcgcgtcgagttcatgtgcgggctcctacatatg
tgccaacccctggagctccgctttttgggatcttatctggaggacctcgccaggaaagat
tatcatgttttacgggacttcgagtttcgggccaacagcccgggcgatctgggcgttctg
acggacgtggtcgacccggtggttcgctccaaactcctggtgtgcctgtccctcctcggg
tccgacagcagggaatgtgctggaatactcttcgggattctgagccatgtagacccggcc
ctgttctacaaacactatgactactccctccttccgttcaggggtccccaccaccagcac
cagcaccacccggtccacccgccctgtcaggacgggagcgtgtacgggcgctcggagcag
agctgcggcttctccgcgagcgagacggcggcgggacctctggagcagttggcgctgctc
ttcaccatggcctccctgcacccagctttccatttccaccagcgggagaccgtccggggc
cagctggacaaaatcgagctggctatagaggagagacgccggagtcagctccggataaac
gcccagacaacggagctcacaggtcagaaagtggatttcctgccccccccagcgctgggt
ttgggagagtgtaccgcttcacatcctccgtgtcagagccgacgctccagccgctgggtg
acacaaagagaagcggtgcatatagaggggattgtgctcaggggcatctctcggaccaga
atagacaaggaatacaactttgaggtgaagtggtcagactcttcttctacctgtgtgacc
aaaacccacctggaactggaaaacttccttcttaagcttcctaaggatcagtgcactgag
tcttttgaaaagagcatcctgaggcttctgaaccagggggaccagtatgagagcagagag
gtggagaagaacctcagggaaaagttcctgtctgctcctccagtcttcagacaaaccaga
aaggtctgccgcttcttcaaccgtgactccacttactctgctaaacccacttcttgcaga
tgcaactgccagctgggcaaagtctaccaaggagactgctccgatgcctccagtcaggag
gaagatttagagtcgtatgttcagggacacaagaaaaagcatgggaccaagagcccaagt
caaggtctctctagtgccaaagcctctcagggagacagttggaggggggggcacactgca
gaggtcaatggtcctgctgagaggaggaagaagagctgtgcactgaggagcagtcaggag
gcggagcaggtgaagcaccaggacactgagaagagaagccacccagtcactaaaaccaag
agcagagtcctgccctctgacagggacaaggtgaaggggaaaggagctgccttcgtgacc
aatggtagtttggtgccagctctgtcgtctcagaggaaagatgggggttctggtccagat
acgtttggtgaaacatcatcagaaagctacagctcaccatccagccctcaacacagaggg
ccagagagcctcgacagtgaggatgacaacaacaaagacacagacagccactctgatgac
tccagtaaaggtcctggtccagacatgttcttcacacaccagactgttccagctgtggtg
ggggacgtctcctctgtccattctctgtcttccctcaaccaccggccccagatggatccc
ctgtgtccagagagcagcacagagtttccccctctctccttcatgcattctctgccacct
cccagccaaagcatcgcccctgatgggaagtcctcatctgggacaatgatgatgcagatg
cccttagtgcctccagccattccaggcccaggaattgtgggagacccagagaagagggac
gtgctcccaacctttgggattccactgattggcgtccgacctcaaggaagtctgtctgtg
cagccttttgttcagaggttcaaaaccgttctgggtggatctaatggagcttcaggaagt
ggttctactgttgccatgccacaggcttcacatcaggccccagtcagagccatgagtgtc
atgcctcctggccccacgtccttctcctctcctcctcagcagccctgccaagacccggcc
agtgtcagctcaggtctggcatcctctctgccacatgtggagccttcacacgccaagcac
cctggcttaactttaccatctggcctgccttctccctacaccctgccccctatcccctca
tctgtgatgcctgctgcaggagcacctgcagccactggagtggctccatcttctggacat
gtacaagctgctgttcccccagctgtgcccacccacacccctggacccgcccccagcccc
agtccagcacttactcacagcacggcacacagtgaatgtacatcctacagcaacagtggt
tcttcctgtggaagtgccgccattgcccctggcatccctattacccttcagcaaacccag
cagcaacaagtgactccacagcagctgacacaaccaccacaacaacaacaacagcaacaa
caacaacagcagcagcagcaacaacaacaacatcaacaacaacaacaacatcaacaacag
cagcagcaacaacatcaacaacaacagcagcaacaacatcaacagcagcagcagcagcag
caaccgatgggctgtggtacgtgtggttgtcataacaactgtggcgggcgaagcagcaac
agcagcagtgtcagcggtccccccagctgccaggcacccttattctttcccgcccaccaa
atggcagcagccgctcgtcaggtgttcagcgttcctccacctctcttccagctaacaagc
ctgtgcagtaacagctacctcacccaggcccagcctcctcaccaggccaacggtgctgcc
accctgtcgcccttcttcaccactgctccacctcctgcacaccagtccccctacggcccc
ctccacactcactcccacagccacgcagacgtgccatcacatatgctgggcacccaggcc
gccgcggtggcggtcgccgcagccgcaacctacaacctccagcagcagatggcgccggcg
gcatctttctgccagcgggtctaccagcacgtgtacccgaatcctctggggatgctgccc
gctgcaactctgggaggaggcggagtcaataagaagagcggcaatgtgtcctgttttaac
tgtggagtcagtggccactacgctcaggactgcaaccagccctccatagactccacacag
caaggtggcttccggttaaagtacgcagcctcccacatttcagaagcattcgacaatgcg
gactga
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