Hippoglossus stenolepis (Pacific halibut): 118098483
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Entry
118098483 CDS
T08308
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118098483 (dcaf11)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118098483 (dcaf11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_LRRK2
PROPPIN
CxC5
Motif
Other DBs
NCBI-GeneID:
118098483
NCBI-ProteinID:
XP_034998221
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All DBs
Position
19:7583967..7592876
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AA seq
543 aa
AA seq
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MGSQSSSGMSGGRSSSSDNPAERSEAAEPNRSRRTADRQTTTASSSAAAAAAPAPEEDVD
LAEVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWEGRLGDRYNPPVDTQPDT
HEVDLSEIRTQILLATASSVQKGRRSFTHMLAEREKGRCKGSSFSHGECSRIRTHFLPNY
VSHKDTYQQKAFCGVYSEEGNMFLSACQDQNIRLYDTTKGRFNLLRTVRARDVGWSVLDV
CFTPDAQHVLYSSWSDYIHLCSIDGDSENHTSLDLNPDERRFCVFSLAASTDGKEILGGA
NDGCLYVFDLEQNKRTLKIDAHEDDVNAVAFADGSSQLLFSGSDDALCKVWDRRTLREDR
PQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQN
WDYRWQQVPQRALRRHKLTGDTSVMTYRGHGVLHTLIRSRFSPEFTTGQRFIYSGCSTGK
IVIYDVLTGTVVSRLSGHDACVRDVTWHPYEDTIISSSWDGAVRMWEHRQTHPLDEERDR
DRD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtccagttctgggatgtctggtggaaggagctcctccagtgacaaccca
gcggagcggtctgaagcagcagagccgaaccggagccgcaggacggcggacagacagaca
acaacagcatcatcatcagcagcagcagcagcagccccagcaccagaggaggacgtcgac
ctagctgaagtgctggcttacctactgaggaggggccaggtcagactggtccatggcagt
ggagccacagggctgcagctggtccagtcgtactctgactctgacgaggacagcgatgga
gcctgggagggtcggctgggagaccgctacaacccgccagtggacacccagccggacaca
cacgaagtggaccttagcgagatccgaactcagatcctgctggccacagcctcgtctgtc
cagaaaggccgacgcagcttcacacacatgctagcagagagggaaaaaggcagatgtaaa
ggctccagtttttctcatggggagtgcagtcgtatccgcacacatttcttgccaaactat
gtatcccacaaggacacataccagcagaaagcgttctgtggagtgtacagcgaggagggc
aacatgttcctctctgcctgccaagaccagaacatccgcttgtacgacaccaccaagggg
cgttttaatctgctgcgaacggtgagggctcgagatgtaggctggagcgtgctcgacgtc
tgcttcactcccgatgcgcaacatgtgctctactccagctggtctgattacattcatttg
tgcagtatagatggcgacagtgaaaaccacacctccctggacctcaatccagatgagagg
aggttctgtgtgttctccctagcagcctccacagatggcaaagagatcctgggaggagca
aacgatggctgcctgtatgtttttgaccttgagcagaataaacgaacgttgaagattgat
gcccatgaggatgacgtgaacgcagttgcattcgctgacggctcgtcccagctgctcttc
tctggcagcgacgacgcactatgcaaggtgtgggacagacggaccctgcgggaggacaga
ccgcagcctgtcggacagctggccggacaccgagacggcatcaccttcatccacagcaag
ggtgatgcacgctatctgatcagcaactccaaggaccagtccatcaagctctgggacgtc
aggaagttctcacccaaagagggcttggcagcgtcccgcctggctgtcacccaacaaaac
tgggattaccgctggcagcaggttccacagagagccctgaggagacacaagctgacaggt
gacacatcggtgatgacctatcgtggtcatggcgtgctgcacaccctcatccgtagccgc
ttctcaccggagttcaccaccgggcagaggttcatctactccggctgctcaaccggaaag
atcgtcatttatgacgtcctgacgggcaccgtggtctccagactgtcgggtcatgacgcc
tgcgtgagggacgtcacctggcatccatacgaggacactatcatcagcagctcttgggac
ggagcggtgcgaatgtgggagcacagacaaacgcatcctctagacgaggagagagaccgg
gacagagactga
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