Hippoglossus stenolepis (Pacific halibut): 118098488
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Entry
118098488 CDS
T08308
Symbol
arhgef4
Name
(RefSeq) uncharacterized protein arhgef4 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118098488 (arhgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118098488 (arhgef4)
Membrane trafficking [BR:
hsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118098488 (arhgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
118098488
NCBI-ProteinID:
XP_034998232
LinkDB
All DBs
Position
19:628738..742331
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AA seq
2288 aa
AA seq
DB search
MESSAGSREPAAGSSGSERGAEPSSGGRSELLLYLTCLPERYRTAKFSLAAYLLCWALLR
WYQKLKCQSAPLQPQEALEDSPLLSEGLGLEEGDLGADSLKWCERSTGGGDTSDEYFDSR
SWHSDTLSDLTADGEDCVVALLGLEDTYDDHKGGFFQTGQNKARRRELLTAKDSHRDATE
TSVGQTSCSRRKSPENHLDSFTLELSTTNLCSVETRPHPSKEKLKLNLLKQQSSLQSVST
ETQPKGCTEPYSLHVLSQHNNKVNTQIDTQEVKLLAQPEKNKSNRPNESIEFKTCMIHTD
AKEDGTVETQPEEQQESVEISNFQDVVRNIEQLSTNVGERNPALNKCNSDFIDRHHQILE
HQSIINEISDNRSLCKSVGIFNNQTPNKIETKCSNNTSIADSNFIDGIHAKKPDSICPPA
YPQSETKYTDSQIITENLAISNITDAHGTKTNRVSNNTNSNLIGKLNTQINVLANEVDFS
CSQIQCDESPNGFLSETHPQVCNGVTTSHDKTKVSGVCFQAEQGGLVGTVAERTISLGTV
NEICSSITFSTETTASLDTCATEQTIVPKFPKVASPVPLVEVDREEFTGRERDQKQPQML
QLWQGQSQNQDLIPNNLDQGNAESEIPFCKQLHLVEKHLKRAQSVSIEAVPDSTQIQPDT
VDESEECLSSHTFSNNLLFLSDKQEAEEIPSLLSEKFRGEWVRVGSPCSLLWPAKELEGE
YSYVCPDQEQVSKAESKVSLSQSKLRKTELSEYSELQVIPEVISNDAEVYFYTQHLPCKI
GETSTHPGGSESIEYRSREHPGVGLKPISQTNIQTTASTVSSQCKQVQLDLKIPETLSSP
KTSIFLLSDSNNNNKGSRKGVQRGEGIDCFLGRAQSKSNDKIIYPLVEPSKNVKNSEVSV
SSLDHRFNWSNEESECVQGKNSKSLVHLSLVHADQLQQPKTEKSTDNNAVLKRLMLKHSN
SERYEGPKPLSSNVDCQFREDKLPGDHSLPNTRGCYTSESLERHTLAVKCRGNTQVSLPA
PQQEVKVVRYSHPDVSLNLLAVRSLEPIWEAERLLENCGTTVDDLVIETEKEHEIMRPAE
EDRDIVTLSGDLFSPSGPQHQAEQKEISLATAEVEPEVTATSVLRSSEKHYRPMTVAYDA
VCYTSASSNCNISDRNANLNKMIMRRKTKGCQTENRGSTFSVFAKMPSFRKAKGSKGSRS
ENEPPDGENDDLMSEQGPRKDNSDDEVFVRGDILNQTVHQSISSVDYEIDEENCDFFTST
PHAHHVRHLTGQGSSLVGNGGSSPDSPLLGQVESPNGLNYKRSKSNDSLNIRMRFAQAHR
SLSSLFESRSMDKENEEQATVCIDVDSVKAKQSWRKLKKPKEAELLKRTLSAPDGECSNT
GQDLGHFIPSPLLDRLSNPGSPSSLRALRHTDPISKRGVPQGSGNPHGCKSEGQRRKCLS
NALPGLSQFSNDSAIPYLNNISPVSPLSPSSLAALTHQPSHTWSRSHQVASEVLTESPLR
PMSPKPNSPRPAAQRKNFCYPHSSRASSVCPILLGQSVSVEGLTDPPERPKTLKPSTSPL
GVNLSLLDTEEHRIDSQSHISLYAFGFISELEGSQNGGRPGSQSRTRKLLEVESEGKASM
VLGRLRNGCWLDVGHERGGRQQRQNCSDDLWIEEQKKYKRKLARAIRGSLGQLNTLISED
MDKTDAGVTSGPIKAFRGMPLKAHCFSQSTPIGLDCLGWRRRISYTSVVIPDGASERAGF
GDELGSEDDLLYEDFRSSGHRFGHPGGGGGEQLAINELISDGSVVYAEALWDHVTMDDQE
LGFKAGDVIEVVDATNKEWWWGRIMDSEGWFPASFVRLRVNQDEPMEEYLAHLEEVHTGE
KDQAALGLLLGPGLPCKEQMRTNVINEIMSTERDYIKHLKDICEGYIKQCRKRTDMFTEE
QLRTIFGNIEEIYRFQRKFLKGLEKKFNKEQPHLSEIGCCFLEHQTDFQIYSEYCNNHPN
ACIQLCKVMKVNKYVFFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQ
HRDYKDVEAALNAMKNVARLINERKRRLENIDKIAHWQSSIEDWEGEDILSRSSDLIFSG
ELTKLSQPQVKSQQRMFFLFDHQMVYCKKDILRRDMLYYKGRMDMDNMEVIDVEDGKEKD
FNISVKNALKLRSVAGDEVHLLCAKKPEQKQRWLRAFADERKQVQHDRDTGFSLTEVQKK
QAMLNACKSHPAGKPKAVTRPYYDFLLRQKHPSLPTALPQQQVFMLAEPKRKASTFWHNI
GRLTPFKK
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcggctgggagcagagagccggccgcggggagcagcgggtcggagcgcgga
gcggagccgagcagcggagggcgctcggagctcctcctgtatctgacctgtctgccggag
agataccggaccgccaagttcagcctggctgcctacctgctctgctgggccctgctcagg
tggtaccagaaactcaaatgccagtcagccccactacagccacaggaagcgcttgaagac
tccccccttctctctgaaggattaggcttagaggagggggatttgggtgctgactccttg
aaatggtgcgagagaagtacaggaggtggtgacacatcggatgagtattttgactctcgc
tcatggcacagtgacaccttgtcggatttaactgcagacggggaggactgtgttgttgct
ctgcttggactggaagatacctacgatgatcataaaggcggtttcttccagactgggcag
aataaagcccgaaggagagaattattgaccgccaaggacagccacagagatgccacagag
acttctgttggacaaaccagttgtagcagaaggaaaagcccagagaaccatctagactct
tttaccttagagctcagcaccacaaacctgtgctcagttgagacccgaccccatccaagt
aaagagaaattaaaactcaacttgctcaaacaacagtccagtttacagtctgtttccaca
gaaactcaaccgaagggttgcacggagccatacagtttacatgtactgagccaacacaat
aacaaggtaaatactcaaatagacacccaggaagtaaagctccttgcacagccagaaaaa
aacaaatccaacagaccgaatgaatctatagagttcaaaacatgtatgatacacacagat
gcaaaagaggacggaactgtggagacacaaccagaagaacagcaggaaagtgtcgaaatc
agcaattttcaggatgtagtacgtaatattgaacagctcagtacaaatgttggagagcga
aacccagctttaaataaatgcaacagtgattttatagatagacatcatcaaattttagag
catcagagtataatcaatgaaatcagtgacaataggagcttgtgtaagagtgtggggata
tttaataatcaaacacctaacaaaatagagactaaatgtagcaacaacacaagcatagca
gattcaaattttatagatggaatacatgcaaaaaaacctgacagtatttgtccaccagca
taccctcaatctgagactaaatacacagactctcagataattacagaaaacttggcaatt
tcaaacatcacagacgcacatggcacaaagacaaatagggtatcaaataacaccaactct
aatctcattggcaaactcaatacacaaatcaatgtactggcaaacgaggttgactttagc
tgttcacaaattcagtgtgatgagagccccaacggatttctgtcagagacccaccctcaa
gtttgtaatggtgtaacaacatcccatgataagacaaaggtgtcaggtgtctgcttccag
gcggaacagggtgggcttgttggcactgttgcagagaggacaatatcacttgggacagta
aatgaaatctgttcctccatcacattttccacagagactacagcctctttggatacctgt
gccactgagcagactattgttccaaaatttcctaaagtagcttcacctgtcccactggtt
gaggtagacagggaggagttcacagggagggaacgagatcaaaagcaacctcagatgtta
caactatggcaaggtcaaagtcaaaaccaagatttaatccccaataacttggatcagggg
aatgctgaatcagaaatacccttttgcaagcagctccatttagtggagaaacatttgaag
agggctcagtcagtctctatagaagcggtgcctgactcaactcaaatccaacctgacact
gttgacgagtcagaggaatgcctgtcttctcacacattttcaaataatttgctgttttta
tctgacaagcaagaagcagaggagatcccctctctgttatcagagaagtttagaggggaa
tgggtgagggtcggatcaccctgctctcttctctggccagccaaggaattggagggggag
tacagttatgtttgtcctgaccaggaacaagtgagtaaagcggagagtaaagtcagtctt
tcacagtcaaaacttcgcaaaacagagctctctgaatacagtgagctgcaagttattcca
gaagtcatttccaatgatgctgaggtctacttttatacacagcatttgccttgtaagata
ggggagacatcaacacatcctggagggagtgagtctattgagtacagaagcagggaacac
ccaggtgtaggtctaaagccaatttctcagacaaacatacaaaccactgccagcacagtt
tctagtcaatgtaagcaagttcagttggatctgaagatccctgaaactcttagtagcccc
aaaacctctattttccttctttcagactctaacaataacaacaagggcagcagaaaaggt
gtacagagaggggagggtatagattgtttcttagggcgagcccagagcaagagtaatgac
aaaataatttacccactggttgagccatcaaaaaatgtgaaaaattctgaggtgtcagtg
tcctcactagatcacagattcaactggagcaacgaggaatcagaatgtgtgcaaggaaaa
aacagtaaaagccttgtccatttaagcctggtccatgcagatcagctacaacaacctaag
acagagaagagtactgacaataatgcagttttaaaaagactaatgctcaagcattccaac
tcagaaaggtatgaaggccctaagccattaagttcaaatgtggactgtcaatttagagaa
gacaagctaccaggggatcacagcttacctaatacaagaggatgctacacgtctgaatca
ttagagcgacatacactggctgtcaagtgcagagggaacacacaggtgagcttgccagct
ccacagcaagaggtgaaggtagtaagatattcacaccctgatgtaagtctcaacctactt
gctgtccgaagtttagaaccaatttgggaggctgagcgtttactggaaaactgtggcaca
acagtagatgatttagtaatagaaacagagaaagaacatgagataatgaggcctgctgaa
gaagatagggatattgtgaccctttcaggggacctcttcagcccctccggtccacaacac
caggctgagcaaaaggaaatatccttggccactgctgaggtagagcctgaagtgacagct
acatctgtcctacgcagtagcgaaaagcactatagacctatgactgttgcctatgatgct
gtgtgttacacctcagctagtagcaactgtaatatttcagacagaaatgccaatcttaac
aaaatgatcatgagaagaaaaacaaaaggctgtcagacagaaaatagaggctctacattt
tctgtctttgccaaaatgccttcttttaggaaggctaagggctctaagggtagcagaagt
gaaaatgagccaccagatggagaaaatgatgaccttatgtctgagcaaggcccaaggaag
gacaactcagatgatgaggtttttgtcagaggtgacatcctcaaccaaacagtccaccaa
agtatttcctcggtggattacgagatagatgaagagaactgcgacttcttcacctctact
ccacacgcacaccatgtccgtcatctaaccggccaagggagtagccttgtgggcaatgga
ggatcaagcccagacagcccccttctcgggcaagttgagtcccctaatgggctaaactac
aagaggagcaagagcaatgacagtttaaacattcgtatgcgctttgcacaagcacacagg
tctctttccagtctgtttgagtcccgttccatggataaggagaatgaggagcaggccact
gtgtgcattgatgtggattcggttaaagccaaacaatcctggaggaagctaaaaaagccc
aaggaggctgagcttctgaaaagaactctgtcagcgccagatggggaatgtagcaacact
gggcaagaccttggacactttataccttctccactcctggacaggcttagcaatccaggg
tcaccatcctccctcagagcccttcgccacacagatcccatatccaaacggggagttcca
caagggagtggaaacccccatgggtgcaaatctgagggccagagaagaaagtgtttatca
aatgctttacctggcctatcgcaattttcaaatgactctgcaattccatatctcaataac
atcagccctgtttcacctttgagccccagctcactagccgcccttacccaccagccttca
catacttggagtaggtcccaccaagttgctagtgaggtcttgactgaaagccccctacgg
ccaatgagccctaaacccaacagtcctaggccagcagctcaacgcaaaaacttctgctat
cctcactcatcaagggccagttctgtgtgtcctattcttctgggtcagtcagtcagcgtg
gaagggctgacagacccccctgagagacctaaaaccctcaaaccctcaactagcccttta
ggtgtcaacctcagtcttctggatacggaagagcacagaatagacagccagtcacacatc
agcctgtatgcctttggcttcatcagtgaattagagggctcacaaaatggtggtcggcct
ggcagtcagtccagaacgagaaagctgttggaggtggaaagcgaagggaaggcctctatg
gttcttggcaggctgaggaatggctgctggttggatgtgggccatgaaagaggtggccgg
cagcaaaggcaaaactgctcagatgacctctggattgaagagcaaaagaaatacaaacgc
aaattggccagagccatcagaggaagccttggccagctcaacacactgatatctgaagac
atggacaaaactgatgctggagtcacctcagggcccatcaaggctttcagggggatgccg
cttaaagcccactgcttctctcagagcactcccatcggacttgactgcctgggctggaga
agacgcatctcctatacctcggtggttattcctgatggcgcttcagagagggcggggttc
ggggatgagctcggaagcgaagacgatctcctgtatgaagactttcgcagttctggacat
cgttttggacacccaggagggggcggaggggagcagctagccatcaatgagctgatcagc
gatggcagtgtggtgtatgctgaggcgctctgggaccatgtcaccatggacgaccaggag
cttggcttcaaggccggtgatgtcatcgaagtagtggatgccactaacaaggagtggtgg
tggggtcgcatcatggacagcgagggctggtttcctgcaagctttgtgcggttgcgtgtg
aatcaggacgagccgatggaggagtatctggcccacctggaggaggtgcacaccggtgag
aaggaccaggcggctctgggcctgttattgggacctggtttaccctgcaaagagcagatg
aggaccaacgttatcaatgagataatgagcacagagagagactacatcaagcacctgaaa
gacatctgtgagggttacatcaaacagtgccgtaagagaacagacatgttcactgaggag
cagcttcgaaccatctttggcaatattgaagagatctaccgattccagaggaagttcttg
aaaggcctggagaagaagttcaacaaggagcagccgcacctcagcgagattggctgctgc
ttcctggaacatcaaacagatttccagatctattcagagtattgcaacaaccaccccaac
gcctgcatccagctctgtaaggtgatgaaagtcaacaagtacgtgttcttctttgaagcc
tgccgactactccagaagatgatcgacatttccttggatggcttcctgctcaccccggtt
cagaagatctgcaagtatccactgcagctggctgagctgctcaaatacaccaacccacag
cacagagactacaaagatgtggaggcagccttgaacgccatgaagaacgtggcaaggctg
atcaatgagaggaagcggcgcctggagaatattgacaagatcgcccattggcagagctcc
atagaggactgggagggtgaagacatcctcagtaggagctctgatctcatcttttcaggg
gagttgaccaagctgtctcagcctcaggtcaagagtcaacagagaatgtttttccttttt
gaccatcagatggtgtactgcaaaaaggacatcctacggcgggacatgctgtactacaag
ggtcggatggacatggacaacatggaggtgatagatgtggaggacggaaaggagaaagac
tttaacatcagtgtgaagaacgccctgaagctgcgatcagtggctggtgatgaggtccac
ctcctctgtgccaagaagcctgaacagaaacaacgctggctccgagcctttgccgatgag
aggaagcaggttcagcatgaccgtgatacaggcttctctctcactgaggtccagaagaaa
caggccatgttgaatgcctgtaaaagccatccagctgggaaacccaaagcggtgaccaga
ccctactatgacttccttctgcgacagaaacacccctccctccccacagctttgccccag
cagcaggttttcatgttggctgagcccaagcgcaaagcctccaccttttggcacaacatc
gggagactgacacccttcaagaagtaa
DBGET
integrated database retrieval system
