Hippoglossus stenolepis (Pacific halibut): 118098489
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Entry
118098489 CDS
T08308
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118098489 (scrib)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
MRG
Motif
Other DBs
NCBI-GeneID:
118098489
NCBI-ProteinID:
XP_034998236
LinkDB
All DBs
Position
19:15617637..15675091
Genome browser
AA seq
2067 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEVFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNEIPEIPESIKFCRALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQALPNDIGNLANLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSEIN
GLVALTDLLLTQNLLEGVPDSIGCLKQLSILKVDQNRLTHLTDSIGECENLTELVLTENL
LQSLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCASLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDELTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAGDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEERRNEAYTTRFDGEEESSDPQEKRLSDLSNQSHDSQVSNSTISATSHEERQN
TTAVSRREDLVDGHSPQEEDELDEMEVEYIEPTVHFAEEPIIRGGDEDDDEDGEDGERSE
EEERPAIPAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGYTADVLNSQKQAAEDEE
DEQSIGTPQQPPRVDELEDSRQQVNSSQVKTNQNMYRQSWNVRSNEPCLCHMGVSFDQVN
NLLIEPARIEEEEHTLSIQRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG
VKVGDKLLEVNGVDLNEAEHHTAVEALRSSGASVSMSVLREHMVEPENAITTTPLRPEDD
YFPRERRSSGIAFNMEPSLSGPMQRLSTSLFRNDKGLGFSIAGGKGSTAYRTGDTGIYIS
RIAEGGAAHRDSTLRVGDRVISINGVDMTEARHDQAVALLTGTSPTIALLVERDPNAPGG
SPGQSRARAHSPPPPEPSDSPDQEEEGLSIHGNHLTRMEDEYPIEEVILVKSGGPLGLSI
VGGSDHASHPFGINEPGVFISKVIPQGLACQSGLRVGDRILEVNAIDLRHATHQEAVRAL
LANKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISK
VSSSGAAARDARLLVGMRILEVNNHSLLGMTHTEAVRVLRAVGDSLFMLVCDGFDPNKVT
AVEASPGIIANPFATGIVRKNSMESISSIDRDLSPEEMEIMQKESEMVRETSQWEREEME
KVERMRLDREEATRLLEEETESIGTGPLKLDYKTLAALPTTSLQKVNRFSTSSTVTAPME
APLQAQYGAPLEPLGFSLVHPTNPLSHMDPESCPGLNAEHDFLNGSQFAPNGSSSADSAC
SSTTINSATFAPEEEENLVDSQSICFKENPFLVANRRGKGRPPGQQVLSGPPVGYGKPGQ
LQPWLFSKAPSSDFTRTDSPIRETPYSPTIQPPSHHSSNSSLAGRETRFANIHCTSTPTA
KDTSPSSTRPGAIQPVGRVWPSTSPATPEGHSPNPFQHGPSPFNSQTSPRAPSPTSPDEF
PMNVKQAYKAFAAVPRSLAVLEPPQELYGVRNNFHPKQPSPEPELNNEVFDDDIDGQEGA
GKGVTGQVSPRQEYMSLAAVPRLSRPSVDLQSPSPGGTGSPEQRSFRDRQKYFEIDVKQQ
TPEKPKPRVSLVGEDDLKNMREEEAKKFDQRAQEYLLDEDEEDEEEDLAKQVAQMKASGK
VLLDGVEYKVEPVSSPSQHCATPPSYNLTPPSYCGSSGPSSVDGKGDSQRNSMEDSFRLD
QRPNSMTGLIPAYQGESAAPIRTAKAERRHQERLRMQSPELAVALDKDLSPAEKRALEAE
KRAMWRAARPCGLEEDVRQYEQDLAKRLYQARVRASQGTAEAPQPPTSSSTSSSAASQLR
MKSLEQDALKAQMVIAKSRDGKKRGTLDQLTESPSPAPTPSPTPMEELSPCGVTSPGRLS
LSSKKFDYRQFAAIPSSKPVYDIQSPDPVDDLQFIDDGSNSPGPTANPEAEVAPPPPATS
ALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcggtggacaagcgg
cactgcaacttgcagacggtccccgatgaggtgttccgctacagccgcagcttggaagag
ctcctgctcgatgccaaccagctcaaggagctaccaaagcctttcttcagactactgaac
ctacggaagcttggcctgagtgacaatgagatccagaggctaccacctgaggtggccaac
ttcatgcagctggtggaactggacatctccagaaacgaaattcctgagatccccgagagc
ataaagttttgcagggccttagagatcgcagacttcagtggaaatcccctctccagattg
ccagatggtttcactcaactccgagcgctggctcacttggcactcaacgatgtgtcattg
caggcgctgcccaacgacattggaaacctggccaacctggtgacgttggagctcagggag
aacctgctgaagtctctgccctcgtcactctcattcctggtgaaactggaacaactggac
ctgggcagcaatgaactggaagttttgccggacaccctcggtgccctccccaacctgagg
gagctgtggctggaccgtaaccagttgtcctcattaccaccagagctggggaacctccgg
agactggtgtgtctggatgtgtcagagaatcgtctggaggagcttccctcggagatcaac
ggcctcgtggctctcactgacctgctgctcacacagaacctgctggagggcgtcccagac
agcataggttgtttgaagcagctgtctatactgaaggtggaccagaacagactgacccac
ctgaccgactcaataggggagtgtgaaaacctcacagaactggttttgacggagaacctt
ttacaatcacttcctcgctctctgggcaaactgaagaagctgaccaacctgaatgtagac
cgcaaccgtttgggcagtgtgcccaaagagctgggcggttgtgccagcctcaacgttctc
tccttgagagacaaccgccttggcaaactgcctgctgagctggcagatgctactgagctg
catgtgctggatgtggctggaaacagattacaaaacttgccttttgccctgacaaacctc
aatctgaaggccatgtggctcgcagagaaccagtcgcagccgatgctcaagttccagaca
gaggatgatgagctaacaggagagaaggtgttgacctgctatctactgccccagcagcct
tccccaagcctagaaaacttgctacagaacagtgtggatgacagctggacagacagcaac
ctgaaccgagtgtcggtcattcagttccaggaagagaccaaggctggggatgaggatgat
gaggctgcagcagagcgcagaggtcttcagcgcagagccacaccgcaccccagtgagctg
aaggtgatgaagaaggtgattgaggagaggaggaatgaggcttacacaaccagatttgat
ggagaagaagagtcctctgacccacaggagaaacggctcagcgacctctccaatcaaagt
cacgactcccaggtatccaacagcacaatatcggccacctcccacgaggagagacagaac
acgaccgccgtctcgcggagggaggatcttgtggatggccattcccctcaggaggaggac
gagctggatgagatggaggtggagtacattgagcccactgtgcactttgcagaagagccc
atcatccgcgggggggatgaggacgacgatgaggacggggaagacggtgagaggagcgag
gaagaagagaggccggccattcccgcagagaagcagcgtctgatcagaaaggacacgcca
cattacaagaagcacttcaagatcaccaagttgcccaagcccgaggcggtggccgctctg
ctgcagggctacactgctgacgtactcaactctcagaaacaggcggctgaggatgaggag
gatgagcagagtattggtacccctcagcagcctcccagagtggatgagctggaggacagc
cggcaacaggtcaactccagtcaagtgaagaccaaccagaacatgtatcggcagagctgg
aatgtgagatctaacgagccttgtttgtgtcatatgggggtgtcatttgatcaagtcaat
aatctgctgattgaacctgctcgaattgaggaggaagagcacaccctgagcatccagcga
caaacaggcggtctgggcatcagcattgccggagggaaaggatccacgccttacaaagga
gatgacgagggaatctttatctccagagtatctgaggagggtcctgcagccagagcgggg
gtcaaagtgggagacaaactcttagaggtgaatggagtcgacctcaatgaggcagaacat
cacacagcggtggaagctctccgcagctccggtgcttcagtgtccatgtcagtgctccgg
gagcatatggtggagccagagaacgccatcaccaccacgccactgaggccggaggacgac
tacttcccacgggagagacgcagcagcggcatcgccttcaacatggagcccagcctcagc
gggcccatgcagcggctgtccacctccctgttccgcaacgacaaggggctgggattcagc
atcgcaggggggaaaggctccacggcgtaccgcacaggagacacgggaatctacatctct
cgcattgcagagggcggagcggcacacagagacagcacgctgcgtgtcggagaccgggtg
atctctatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcgcttctt
accggcacctcccccacaatcgctctcctggtggagcgagacccgaacgcaccagggggc
tctccaggtcaatcccgggcacgtgcccactcccctccacccccagaaccctccgattct
ccggaccaggaggaggagggcctctcgattcacgggaaccacctgactcggatggaggac
gagtacccaatcgaggaagtaatcctggtgaaatcaggtggcccccttggcttgagcatt
gtgggaggcagtgatcacgccagtcatccgttcggcatcaacgagcctggggtgttcatc
tcaaaggtgattcctcagggcctggcatgtcaaagcggacttcgcgtcggagaccgaata
ttagaggtgaacgccatcgacctgcgtcatgccactcaccaggaggccgtgcgagccctg
ctggccaacaagcaggagatccgtatgctggtgcggagggatccttcaccgcctgggatg
gaggaaattgtcatccagaagcagccgggggagaagctcggcatcagtattcgtggaggg
gccaagggtcacgctggaaacccctttgaccccacggatgagggaatcttcatctcaaag
gtgagctccagtggagcagcagcaagagacgcccgactgctggttggcatgcggatcctg
gaggtgaacaaccacagcctgctggggatgacgcacacggaggcagtgcgggtgcttcgt
gcggtgggagactctctgttcatgctggtgtgtgacgggttcgacccaaacaaagtcaca
gctgtggaggcatctcctggcatcattgcaaacccgtttgcaacaggcattgtgcgcaag
aacagtatggaaagcatctcttctatagaccgagatctgagcccagaggaaatggagatc
atgcagaaggagtctgagatggtgagagagacgtcacagtgggagcgagaagagatggag
aaagtggagcgaatgcgcttggatcgtgaggaggcaactcgcctgctagaagaggagact
gagagcatcggcactggacctttaaaacttgactacaaaaccctggctgcacttcccacc
accagtctgcagaaggtcaacaggttctctacctcttccactgtgactgctcccatggag
gcccccctgcaggcccagtacggagcccctttagagcccctgggcttcagcttagttcac
cccacaaaccccctcagccacatggatcccgagtcctgccctggtctaaacgcggagcat
gattttctcaatggatcccagttcgccccgaatgggagttccagtgctgacagcgcctgc
tcgtcaacaaccataaactcagcaacatttgcccctgaagaagaggagaacctggtggac
tctcagtctatctgcttcaaggagaaccctttcctggtggccaatcgcaggggaaaaggt
cgcccccccggccagcaggtcctgtcggggcctcctgtcggctacgggaaacccggccaa
ctgcagccgtggttgttcagcaaggccccttcctctgatttcaccaggacagacagcccc
atcagggaaacaccctactcccccaccatccagccgcccagccaccactcttccaacagc
tccctggcaggcagggagacccgcttcgcaaacattcattgcacctccactcccactgcc
aaggacaccagcccatcatcaacgcgaccaggtgccatccagccagtcggccgcgtgtgg
ccgagtacctcccccgccactccggaaggccacagtcccaacccctttcagcatggcccc
tcccccttcaactcccagacctctcctcgcgccccctcccccacctcgcccgacgagttc
cccatgaatgtcaagcaggcatacaaggcgtttgccgccgtgcctcgctcactggcagtg
ctggagccgccgcaggagctgtatggtgtgaggaacaattttcatccgaagcaaccttct
ccagagcctgagttgaacaacgaggtgtttgatgatgacatagatggtcaggagggagct
gggaagggtgtgaccggccaggtctccccccggcaggaatatatgagcctggcagcagtg
ccacgtctctccaggccttcagtggacctgcagagtccttctccggggggtacgggcagc
ccagagcagcgatctttcagggacagacagaagtatttcgagatcgacgtgaagcagcag
actcctgaaaaacccaaacctcgagtctctcttgttggagaggatgacctcaagaacatg
agggaggaagaagcgaagaagtttgatcagcgggcgcaggagtacctcctggacgaagat
gaggaggatgaggaggaggacttggccaagcaggtggctcagatgaaggccagtggcaaa
gtgttgctggacggcgtggagtataaagtggagccagtgtccagcccttctcagcactgt
gccacacctccaagctacaacctcacaccaccgagctactgtggcagctcaggaccctcc
tctgttgacggtaaaggagactctcagaggaattcaatggaggacagcttcaggctggat
cagaggcccaactccatgacgggtctgatcccagcgtatcaaggggagtcggcggctccc
atccgcacggccaaggcagagcgccgacatcaggagaggcttcgtatgcagagccccgag
ctggcggtcgccctcgacaaggacctgtccccggccgagaaacgagctctggaggctgag
aaaagagccatgtggagagcagcacggccctgtggtctagaggaggatgttaggcagtat
gagcaggacctggctaagaggctctaccaggcccgggtgagggcgtctcagggcacggct
gaggccccccagccccccacctcttcctctacctcctcctctgcagcctcccagctcagg
atgaagtccctggagcaggatgcgctgaaggctcagatggtcattgcaaagtctcgcgat
gggaagaaacgtgggacgttagaccagctgacggagtcgccgtcgcctgctcccacaccc
tctcctacacctatggaagagctcagtccttgtggagtcacttcaccgggcagactgtcc
ctgtcgtcaaagaagtttgactaccgacagtttgccgccattccttcttccaaacccgta
tacgacatccagtctcctgacccagtcgacgacctgcagtttattgacgacggctccaac
agcccaggacccactgccaaccccgaggcagaggtcgcccccccgccgcccgccacctca
gccctggaggagatggccttgtacagcaacaagcgcaaactgaggcagggtcgccgcagc
ctggaaaccgccgtgcccacgtaa
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