Hippoglossus stenolepis (Pacific halibut): 118098498
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Entry
118098498 CDS
T08308
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118098498 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118098498 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118098498 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
C2-set_3
Ig_CD22
baeRF_family7
Motif
Other DBs
NCBI-GeneID:
118098498
NCBI-ProteinID:
XP_034998259
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All DBs
Position
19:complement(14996419..15018042)
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AA seq
1485 aa
AA seq
DB search
MSGSLPFYQKNHRHYDRGYRNKETASKMSQYQSSSSSSSSRYFAGSSTSATSSSRGLRVS
SHSGLEESRLSPIPKRTKPTYLAVDKENQIIGYVIPIFRGSQEFATGFSDTEESRVRDMA
RRDLFSSGLEMERSELISRKEAMRESADRICLNKRIHDQEEHSKRMNEDSLMHPPEFVIK
PRSHTVWEKQCVRLHCTVTGWPNPRVVWYKNNVAIESIANPGKYKLESKYSVHSLDINRC
DFDDTAQYHVSAMNSKGELSAFASVVVKRFKGEVDEYMPAPRHGPVSEYGVTFQTHIVDK
FGVSFGREGETMSLGCTVVIYPSLHRYQPEVQWYKDGVLLSPSKWYQMHWSGDRATLTLA
HLNKEDEGLYTLRVTTKSGYETYSSYVFVRDSDAEMEGAPGAPLDVRCLDANKDYIIVTW
KQPAVDGGHSILGYFVDRCEVGTNHWIQCNDTPVKFARFPVTGLVEGRSYVFRVRAINNS
GMSHPSRVSEPVAAMDPGDRARLRGTSAPWTGQIIVTEEEPAEGIVPGRPLELQVTEATK
NYVVLSWKPPGEKGLEGVRYYVEKCVSGTDTWQRVNTEIPVKSPRFALFDLAEGKSYSFR
VRCCNPAGVGEPSDPTEATTVGDKLDIPSAPSKVVPIRNTDTSVVVSWVASSDAKELVGY
YIEGSIVGSNVWEPCNNKPVNVTRFICHGLMTGEKYVFRVRAVNAAGLSGFSPESEPVEV
KAAIASPAPPFGISVLECVRDSMVLAWKQPSFIGGADISGYFVDYREVVDGVPGKWHEAN
IKAVSERAYRVSDLMENRKYQFQVRAANMAGVGIPSLPSDTFPCKEWTIAVPGPPHDLQV
REVRNDSLVLLWKPPVYQGRDAVNGFYIDIKEEDAPVEAWRSVNNKATEKTYMKIKNLKE
GEVFVFRVRAQNKAGVGKTSEVTEPVSAVTKPGTNEISVAVDDDGIISLNFECCDLTPDS
KFVWSKNYEEITDASRLTMETKGNKSKAVFNTPAEEDIGIYSCIVTHTDGASSSYDLSEQ
ELKRLLEVSHDHKFPIIPLKSELAVELLEKGRVRFWLQAEKISADGKVDYVFNENLISQG
EKYKMNFDKSTGVIEMIMESLTPADEGTFTFRLKDGKATNQSSLVLIGDVFKGLQKESEF
QMKEWVRKQGPHFIEYLSYEVTPECCVLLKCKVGNVKKETSALWYKDGREIKADEHLGFT
EGVLKLEIAQCDCPADTADSDVIWRKIKISKKDSGVYEVVLKDDRGKDTSKLNLTDQGFK
DLMNEVFSFIANSSTPLKITSTDEGIRLYTFVNFYNDLLQVTWHYKDSAISFSDRIKSGV
VGEQLWLQITEPTEKDTGKYAIEFHDGKGGLRRTVELAGQAFDDAFAEFQRLKSAAIAEK
GRARVAGGLPDVVTIQEGKALNLTCNISGDPVPKVTWLKNDREITSDDHCILKFESGKFA
SFTITAVNTSDTGKYSILVKNKYGTESGDFTVSVFIPEEAAGKKK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatctttaccgttctaccagaagaaccaccgccactatgaccgtggctaccgt
aacaaggagacggcgtctaaaatgagccagtaccagtccagcagcagcagcagcagcagc
agatactttgcgggcagcagcacctccgccaccagcagcagcagaggacttagagtgtct
tcacactctgggctggaagagagccgactgagccccatacccaagagaaccaagccaact
tacttggctgtggataaagagaaccaaatcatcggctatgtaattcctatcttcaggggc
agtcaagagtttgctacaggattttcggatacagaggaatcaagggtgagggacatggcc
cgcagggatttgttcagcagtggcctggagatggagaggtcagagctgatctccaggaag
gaggccatgcgcgagtcagctgatcgcatctgtctgaataaaaggatccatgatcaagag
gaacactccaagcgtatgaacgaagacagcctgatgcatcccccggagtttgtgattaaa
cctcgctcccacactgtgtgggagaagcagtgtgtgcggctgcactgcactgtcactggc
tggcctaacccacgggtcgtctggtacaaaaacaatgtggccattgaatcgattgcaaat
cctggcaagtataaacttgagagcaaatacagcgtccattcactggatattaacagatgc
gattttgatgacacagctcagtatcatgtctctgccatgaactccaagggggagctctct
gcgttcgcctccgttgttgttaaaaggttcaaaggtgaagttgatgagtatatgccagct
cccagacatggcccagtgtctgagtatggcgtcaccttccagactcacattgttgataag
tttggtgtttcatttggaagagagggggagaccatgagtctgggctgcaccgtcgtcatc
tacccgtccctgcaccgctaccagccagaggttcagtggtacaaagatggtgttctgctg
tctccatctaaatggtaccaaatgcactggagtggagacagagccacactgacgctcgcg
cacctcaacaaggaggacgagggtctctacaccctgcgagtcaccaccaagtcgggatat
gaaacctactcctcctatgtcttcgtcagagattctgatgctgagatggaaggcgctcca
ggcgcccctctggacgttcgctgtctcgacgccaacaaggactacatcattgtcacttgg
aagcagccggctgtcgatggcggccactccatcctgggctacttcgtggacaggtgtgag
gttggaaccaaccactggatccagtgcaatgacactccggtcaagttcgcccgtttccct
gtgaccggtttggtggagggtcgttcttatgtcttccgcgtgcgtgctatcaacaacagc
ggcatgagtcatccgtccagagtgtccgaaccagtggccgccatggacccgggtgaccgc
gcccgcttgagaggtacttctgctccctggaccggacaaatcattgtcacagaggaggaa
cctgcagagggcattgttcctggcagacctcttgaactccaggtgacggaggcgaccaag
aattacgtggtgctgagctggaagccacctggagagaaaggcctggagggagtcaggtac
tacgtggagaagtgtgtgtcgggcacagacacctggcagagggtgaacacagagatccca
gtcaagtcccctcgctttgcgttgttcgatctggccgaggggaagtcctacagcttccgc
gtccggtgctgcaaccctgccggggtcggtgaaccctccgacccgactgaggccaccaca
gttggtgacaagcttgatatcccatcagcccccagcaaagtcgtccccattcgaaacaca
gacacatcagtcgtcgtgtcttgggtagcgtccagtgatgccaaagagttggtcggttac
tacatcgaggggagcatcgtgggcagcaacgtgtgggagccgtgcaacaacaagcctgta
aatgtaaccaggttcatctgccacggtctgatgacgggagagaagtacgtgtttagggtg
agggcagtgaacgcagcagggctcagcgggttctccccagagtctgagcctgtggaggtg
aaggctgctattgcctcccctgctccaccctttggcatcagcgtcctggagtgtgtgcgc
gactccatggtgctggcctggaaacagccgagcttcatcggcggtgctgacatctccggc
tacttcgtggattaccgtgaggtcgtcgatggcgtgccggggaagtggcacgaggccaac
atcaaggctgtcagtgagagggcctacagagtgtccgacctgatggagaacaggaagtac
cagttccaggtgcgagcagccaacatggcaggtgttggcatcccgtcactgcccagtgac
accttcccgtgtaaggagtggaccatcgctgtgccaggacctcctcatgacctgcaggtg
agagaggtgcgcaacgactctctggtgttgctatggaaaccacctgtgtaccagggccgc
gatgcggtcaacgggttctacatcgacatcaaggaagaggacgccccagtggaggcgtgg
agaagcgtcaacaacaaggccacggagaagacgtacatgaagatcaagaacctgaaggag
ggagaggtgttcgtgttccgtgttcgtgctcagaataaagccggtgttggaaaaacgtct
gaagtgacagagccggtttcagctgtgaccaaacctggcactaatgagatcagcgtggct
gtggacgatgacggcatcatctccctgaacttcgaatgctgtgacctgacccctgactcc
aaatttgtgtggtccaagaattacgaggagatcacagacgcctcccgcttgactatggag
accaagggaaacaaatctaaagctgtcttcaacacacctgcagaggaggacatcgggatt
tactcctgtatcgtcacccacactgatggagcttcatccagctacgatctctctgagcaa
gagttgaagaggctgctggaggtcagtcacgaccacaaattccccattattcccctgaag
tcagagttggctgtggagctgttggagaaaggcagagttcgcttctggctgcaggccgag
aagatttccgctgatggcaaagtcgattacgtgttcaatgaaaacctcatctctcagggg
gagaaatacaagatgaactttgacaagagcaccggcgtgatcgagatgatcatggagtct
ctgaccccggcggacgagggcaccttcaccttccggctgaaagacgggaaagcaaccaac
cagtccagcttggttctgataggagacgtgttcaaggggctgcagaaggaatcagagttc
cagatgaaagagtgggtcagaaagcaaggtcctcactttatcgagtatctgagttatgag
gtgacgcccgagtgctgtgttctgctgaagtgcaaggtcggcaacgtgaagaaggagacc
tcggcgctgtggtacaaagacggacgagagatcaaggcagacgagcatctgggcttcaca
gagggagtgctgaaactggaaatagctcagtgtgactgcccggcagacacagccgacagc
gacgtaatctggagaaagataaaaatttccaagaaggattccggtgtgtacgaggtcgtt
ctgaaggacgacagaggaaaagacacgtccaagttgaatttgacggatcaaggtttcaag
gacttgatgaatgaagttttcagttttattgccaattcctccactccgctgaagatcaca
agcacagatgagggcatccgactctacaccttcgtcaacttctataacgatttactccaa
gtgacatggcactacaaagattcagccatctccttctctgaccgtataaagagcggcgtg
gtgggggagcagctgtggctgcagatcactgagcccacagagaaagacacgggcaaatac
gccatcgagttccacgacggaaagggaggcctgaggaggaccgtggagttggctggtcaa
gcatttgatgacgcttttgcagaattccagagactcaaatccgctgccattgcagagaaa
ggtcgtgctcgagtagcaggaggtttgcctgatgtggtcaccatccaggagggcaaggcc
ctgaatctcacctgcaacatttcgggcgaccccgtgccaaaggtcacctggctgaagaac
gacagggagatcacgtccgacgaccactgcatcctgaagttcgagtccggcaagttcgcc
agcttcaccatcacggccgtgaacacgtcggacaccggcaaatacagcatcctggtgaag
aacaagtacggcacagagagcggggacttcaccgtaagtgtcttcatccctgaagaggcg
gccggcaagaaaaaatag
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