Hippoglossus stenolepis (Pacific halibut): 118098507
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Entry
118098507 CDS
T08308
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118098507 (ptbp2a)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118098507 (ptbp2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
118098507
NCBI-ProteinID:
XP_034998279
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All DBs
Position
19:complement(1567989..1584576)
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AA seq
518 aa
AA seq
DB search
MDGISDVAVGVKRGSDELSMYNSPNSGMSSSSDGASNGSDSKKLRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMINYYTTVTPHIRNIPI
FIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQDALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDSTVAAAFSKDSNSLLGKIPGALS
PLSAAAAAAAAAGRVALAGQTGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKVYGKIIRVTLSKHQTVALPRDGLDDQGLTKDFAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEDDLRLLFSNAGGTVKAFKFFQDRKM
ALIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagcgatgttgcagttggagtcaagagaggatcagatgagctgagtatg
tacaacagtcccaactctggcatgagcagtagcagtgatggggcttccaatggcagtgac
agtaaaaagctcagggtggaggaggcccctccgtctcgtgtgctccacatcaggaagctg
cccaacgaggcctcggagacagaagtcatcgcccttggcttgccttttggcaaagtcacc
aacatcctcacactaaagggaaagaaccaggcattcttggagatggggacagaggaggca
gccatcactatgattaactactacaccacagtaactcctcatatccgcaatatccccatc
ttcattcagtactccaatcacaaggaactcaaaaccgatgctggaaatcagcggacccag
gcagtgctgcaggcagtgtcagcagtccagtcgggtggctcaccaagctcagacgttcag
gatgccctcgcagcagcctccagtcccgtgctgcgcatcatcatcgacaacatgttctac
ccagtaaccctggatgtgctgcaacagattttctccaagtttggcacagttatgaagata
atcacatttaccaagaacaatcagttccaggcccttctacagttcagtgatcctgttaac
gcacagcaagcaaaactggcattggatggtcagaacatatacaactcgtgctgcacactg
cgtatcgacttctccaagttggtgaacctaaatgtcaagtacaacaatgataagagtcgt
gactacacacgacctgagcttcccgctggggacggacagcccagcctcgactccacggtg
gccgctgcgttcagtaaagattccaattctctcctcggtaagatcccaggagccctgagc
cctctgagcgctgcagcggcggctgctgctgctgcagggagggtggccctggctggacag
acagggtccagcggggtcctgctggtcagcaacctcaacgaggagatggttacgccccaa
agtctgtttaccctcttcggagtgtatggtgatgtccagagggtaaaaatactctacaat
aagaaggacagcgctctcattcagatgtcagacgccaaccaggcccagctagcaatgagc
cacctgaacgggcaaaaggtgtatgggaagatcatccgagtgaccctgtccaagcatcag
acggtggcgctgccccgtgatggcctggatgaccagggcctgacgaaggactttgccaat
tctccactccatcgctttaagaaaccgggatccaaaaacttccagaacatctttccgccc
tctgccaccctccacctctccaacatcccacaagatgtgacggaggacgacctgcgactg
ctcttctccaacgctggaggcactgtgaaagcattcaagtttttccaggatcgtaaaatg
gctttgattcagatgtcaacagtggaggaggccatccaggctttgattgaccttcacaac
tacaacatgggaggcaaccagcacctgagagtgtccttctccaaatccaccatttga
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