Hippoglossus stenolepis (Pacific halibut): 118098574
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Entry
118098574 CDS
T08308
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118098574 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118098574 (nup58)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118098574 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
PSY3
Motif
Other DBs
NCBI-GeneID:
118098574
NCBI-ProteinID:
XP_034998438
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All DBs
Position
19:complement(8704291..8718127)
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AA seq
612 aa
AA seq
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MSGFNFASGTLGPATAGGGFAFGAATSAPAASTGGFSFGSALGAAAAPPASIANTTASLG
LGGGLGGSLFAQKPAGGLSFNTPAQTNTIPQAQFQPGPAAPTTGLTLGAPAASVAPAGFS
LAFNKPTASATPFSLTASTASSAPAGAGLTFGSVLTSMAPQQPAATAFTLGLGAATTTTS
AALAGPSLGGGLFSNTASTGLGQTLGGGSLTLGSLLATSTAVSVAPAPSVGLGGVDFSTS
SENKSDSSSGANAQDSKALKDENLPPVICQDVDNFQKFVKEQKQVQEDISRMSSKGISKV
QDDIKSLKQLLSVNASGLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPS
DYFRSLVEQFEVQLQQYRQQIEELENHLTTQSSGSHITPQDLTLAMQKLYQTFVAQAAQL
QSVHENVKILKHQYLSFRRAFLEDSTDVFESKRASNRKWQSTPRVTTGPTPFSSVPNAAA
VAMAATLTQQQQPTTGTQAPLGAGFGNPFASAVGSSLGSSTLGGFGGGPGFGGVGTGGSS
FAFSSTSKPTGGSLSAGFGSSSTSGFNFSNPGINPSAGLTFGVSNPPAAGFGTGGPLLQL
KKPPAGNKRGKR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttcaactttgcatcggggaccctcggtccagccaccgcgggcggggggttc
gccttcggagcagcaaccagtgcacctgcagccagcaccggtggcttctcctttgggtct
gctcttggcgcagcagcagctcccccggcctccatagccaacaccaccgcgtctctgggc
ctcggcggcggcctcggcggcagcctcttcgctcagaagcccgcaggagggttgtcgttc
aacacgcctgcccaaactaacaccatcccacaggcccagttccaacctggccctgctgca
cccaccacaggccttacattaggtgctccagccgcctcggttgcccccgcaggctttagc
ctagctttcaacaagcccaccgcctcagcaacaccattctccctcaccgcctccaccgcc
tcgtcagcccctgctggggcaggtttaacgtttggttcagtcctgacatccatggctccg
cagcagcctgcagccacggccttcaccctcggtcttggtgccgccacaacaaccacctca
gcagccttagcgggcccatcactgggcggggggctcttctccaacacagcctctacaggt
ttgggtcagacacttggaggaggcagcttgacgttaggttctctgttagcaacctccaca
gctgtatcagtggcccctgcccccagcgttggcctgggaggagtcgacttcagcacttca
tcagagaataaaagtgactcatcgtctggagccaacgcacaggacagtaaagctctaaaa
gatgaaaatttgcccccagtcatttgtcaggatgtggacaatttccaaaaatttgtgaaa
gagcagaaacaggttcaggaggacatcagcaggatgtcatctaagggcatctcgaaagtc
caggatgacatcaagagtctcaaacagcttctctctgtcaacgccagtggtctgcagcgc
caagctctggccatcgataagttaaagctggagacggcgcaggagctgaaaaatgctgac
atagcactgcggacacaaaagactccccctggacttcaacatgaaaacactgcaccatct
gattatttccgcagtctggttgaacagttcgaggtgcagttgcaacagtaccgccagcag
atagaggagctagaaaaccacctgacgacgcagagcagtggctcccacatcacccctcag
gacttgaccttggccatgcagaagttgtaccagacatttgttgctcaggccgcccagctc
cagtcagttcatgaaaatgtcaagatcttgaagcatcagtacctctccttccgccgagcc
ttcctggaagactccacagacgtcttcgagtccaaacgggcctccaacaggaagtggcag
agcacgccgcgagtcacaactgggcccaccccattctccagtgtgcccaacgccgcagca
gttgccatggcagccacgttgacccagcaacagcagccaactacagggacccaggcaccc
ttgggggcagggtttggaaacccctttgcctcggcagtgggcagtagcttgggctcttct
acccttggaggttttggtggtgggccaggatttggtggggtggggactgggggttcttct
tttgccttctcctccaccagtaagcccacaggaggcagtctgagtgcaggctttggcagc
agcagcacctcaggcttcaacttcagtaaccccgggatcaacccctcggccggcctgacc
ttcggcgtgtcgaacccaccggccgccggcttcggcacgggagggccgcttctccagctc
aagaagccccctgctggtaataaaagaggcaagagatag
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