Hippoglossus stenolepis (Pacific halibut): 118098602
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Entry
118098602 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118098602
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118098602
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF3807
TMEM214
DDHD
Motif
Other DBs
NCBI-GeneID:
118098602
NCBI-ProteinID:
XP_034998494
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Position
19:complement(7180849..7193954)
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AA seq
756 aa
AA seq
DB search
MFSKFKGLLSGPKVPTAPGTTRVAPDPAPAPAPDGSAPAPDPAPAPDPAPAPAPAPASAP
AEEAKAADQGNEAKPQESTPVPAPAPGPTPAPAPGTTAAPTNPNQAGPDEPEQPPPPPPP
IVINRYSDDQLRSIIKQMRERQALYKEKVVDQYASSPEITPPVTPLLRKDNYAIVIEERK
RQAEEDRIKKEEADKKKKEEQEKKKKENEQKKKEEEEKKKVEREEEKKLEKLDMKTKMTE
TAWRTVDTMLKPFEDSMDSVVGITIDPFTDRHYIAWLSLVTLAFNYNTWFVTARLCFPYH
TATAIPFWFAMDLLADLVYLMDSILFQSRKQFVKGGDIIKNREMTKKNYRDSERFKIDML
CLVPFDLLYLQFGFKSIFRANRLLKADTFFEFSDRLESLMAKAYIWRVIRTIGYLLFMLH
LNACFYYVASEYQGIGKTKWVYSGLGSAYLRCYYYAVRSLINIGGLNEPHTVFEITFQMT
NFFTGVFVFSSLIGQMRDVIGAATTGQTYFRASMDNTVDYMVNNNIPLTVQNRVRTWYTY
TWDAQGMLDESELLDKMPLVMRTAIAVDINLATFQKIELFKGCDQQMLVDMLLRLKSIVY
LPGDFVVKKGDIGKEMYIIKGGAVQVVGGPDNSIVFVTLKAGCVFGEISLLQSSKDGGNR
RTANVKAYGFANLFVLEKKDLFDILVHYPESQKVLARKGRKLMKAKGPTVAKADEEKKKG
LALFGPKPATPKLLRAVGGNFNRNFINRMKAAASGQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaaattcaagggcctcctcagtggcccgaaggtcccaacggctcctgggacc
accagagtggcccccgacccagctccagctccggctccagatggctcggctccagctcca
gatccggctccagctccagatccggctccagctccagctccagctccagcttcagctcca
gccgaggaggcgaaggcggccgatcaggggaatgaggccaaaccgcaggagtcaactcct
gttccagccccagccccaggcccaacccctgctccagcacctggcactacagcagctcca
actaaccctaatcaagccggacctgatgaaccagagcagccccctcctccgcccccgccc
atcgtcatcaataggtactcagacgatcagctccggtccatcatcaagcagatgagggag
agacaggcgctgtacaaggagaaagtggtggatcagtacgcttcttcccctgagatcacc
cctcctgtcacacctctgctccgcaaagacaactacgcaatagtcatagaggagaggaag
agacaagccgaggaggatcggataaagaaggaggaggcggataagaagaagaaagaggag
caggagaagaagaagaaggagaatgagcagaagaagaaggaggaggaggagaaaaagaag
gtggagagggaagaagagaagaagttggagaaattggacatgaagaccaagatgaccgaa
accgcgtggcgcactgtggacaccatgctgaagccgtttgaggacagtatggactctgta
gtggggatcaccatcgaccctttcacagaccgccactacatcgcctggctgagcctggtg
accctggccttcaactacaacacctggttcgtcacggcccgcctgtgcttcccgtaccac
acggcgaccgccatccctttctggttcgcaatggacctgctggccgacctcgtctacctc
atggactccatcctcttccagtcccgcaagcagtttgtcaaaggcggagacatcataaaa
aacagagaaatgactaagaagaactacagggactcagagagattcaagatagacatgctg
tgtctcgtacctttcgacttgctgtacttgcagtttggattcaaatccattttccgagcc
aatcgtctgctgaaggcggatacgttctttgagttcagcgatcgtctggagagcctcatg
gccaaggcgtacatctggagagtgattcgaaccattggttatctgctcttcatgctccac
ctcaacgcctgcttctactacgtggcctcagagtaccagggcatcggcaaaactaaatgg
gtctactccggcctgggcagcgcgtacctgcgttgttactactacgctgtccgcagtctg
atcaacatcgggggtcttaacgagccccacaccgtctttgagattacctttcagatgact
aactttttcacgggcgtctttgtgttctccagtctgatcggacagatgagagatgtcata
ggtgcagccacaaccggacagacatacttccgagcctccatggacaacaccgtggactac
atggtgaacaacaacatcccattgacggtgcagaacagagtccgcacctggtacacgtac
acctgggacgctcagggcatgctggatgagtcagagctgctggacaaaatgcctctggtg
atgagaaccgccatcgccgtggacatcaacctggccacctttcagaagattgaacttttc
aagggctgcgaccagcagatgttggtggacatgttgctgaggctcaagtcaatcgtctac
ctacctggagactttgtggtgaagaaaggtgacatcggtaaagagatgtacatcatcaaa
ggtggagcggtgcaggttgtgggaggacctgacaacagcattgtgtttgtcacactgaag
gccggctgcgtgttcggagaaatcagcctgttgcagtcgtccaaagacggaggaaacagg
cgcacagctaacgtcaaagcatacggcttcgctaacctctttgtcctggagaagaaggac
ctgtttgacatcctcgtccactaccccgagtctcagaaagttcttgccaggaagggaagg
aagctgatgaaggccaagggtcctacagtagcgaaggccgacgaggagaagaagaagggt
ctcgctctgtttggacccaaaccagcgacgcccaaactgctgcgagctgtcggtggaaac
ttcaacagaaatttcatcaacaggatgaaggctgctgcaagtggacaatga
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