Hippoglossus stenolepis (Pacific halibut): 118098657
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Entry
118098657 CDS
T08308
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118098657 (trdmt1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
118098657 (trdmt1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118098657 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
118098657
NCBI-ProteinID:
XP_047193827
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All DBs
Position
19:332335..345693
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AA seq
386 aa
AA seq
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MCTMESLRVLELYSGIGGMHYALKESGIPGQVVAAVDINTTANQIYRHNFPDTPLWNKTI
EGIPLDDFNKLSFDMILMSPPCQPFTRIGLQGDIHDLRTKSFLYILDVLPRLHRLPRFIL
LENVKGFETSSARNILVKTLMECGYTFQEIMVSPTSVGIPNSRLRYFLIAKLATNNLSTQ
TKISDAHLHPSEYDSSELPTDLYPTHTSTCQPEEDLQGGHVLYKLETATDVQRKMIQNNN
LSVRQIQDFLEPQMEANLENFLLPPKTLLRYALLLDIVQPSSRRSVCFTKGYVRYVEGTG
SVLTSCMETEMEHAFTHLDQCSEEEKLKRLMKLKLRYFTPREVANLMGFPQSFCFPEQIS
TRQKYKALGNSLNVVVVTKLLQTLLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccatggagagtttgcgtgtgctcgagctctacagtggaataggagggatgcat
tatgcattaaaggagagtggcatacctggccaggtggtggctgctgtcgacataaacacc
actgccaatcagatctacaggcacaatttccctgacaccccactctggaacaagacaata
gagggcataccactagatgactttaataaattatcttttgacatgattttgatgagccct
ccttgccaacctttcaccaggataggtcttcagggtgacattcatgacctcagaaccaag
agcttcctctacatcctcgatgttttgccaaggctgcacaggctgccccgcttcattctg
ctggagaacgtgaaaggctttgagacttcctctgccaggaatattttggtgaaaacactg
atggagtgtggatatactttccaggagatcatggtctcacccacaagtgttgggattcct
aattcaagattgcgttatttcctgattgctaagcttgcaacaaataacttaagcacccag
acaaagatttcagatgcccacctacatccctctgagtatgattcgtctgagctgcccaca
gacttgtatccgacccacacaagtacctgccagccagaagaggacttgcaggggggtcat
gtcctgtataaactggagacagcaactgatgtgcagcggaaaatgattcagaacaacaat
ctgtctgtcaggcagatccaagacttcctggaaccacagatggaagcaaacttggagaac
tttctccttcctcctaaaaccctactgcgatatgctctgctcttagacattgttcagcct
tcatccaggaggtctgtctgctttaccaaaggctatgtacggtatgtggaaggaactggc
tcagtactgacaagctgtatggaaacagagatggagcatgcgtttactcatctggaccag
tgctctgaagaagaaaaactcaagcggctaatgaaattgaagctccgatattttactcca
agagaagttgccaacctcatgggtttccctcagagcttctgctttccagaacaaatctca
accaggcagaagtacaaagctctaggaaacagcctgaatgttgtggtggtgaccaaactc
ttacaaacgctactctcctag
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