Hippoglossus stenolepis (Pacific halibut): 118098748
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Entry
118098748 CDS
T08308
Symbol
gli3
Name
(RefSeq) transcriptional activator GLI3
KO
K06230
zinc finger protein GLI3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118098748 (gli3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118098748 (gli3)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118098748 (gli3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
118098748
NCBI-ProteinID:
XP_034998741
LinkDB
All DBs
Position
19:15794478..15887529
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AA seq
1626 aa
AA seq
DB search
MENQSQASSAAEKKKRVETIVATKGSSVRNDISEKAVASSTTSNEDDSSGTPYHRERRNA
ISSRAPANEEPSTSTEERPSLLKKELHGSLPHLVDHGLPYRGTLFAMDPRNGYLESHYPA
PQFFPAFHPPVPIDDRHAQGRYIYDPSPVPPLHVPPSLAGSPAFSDISLIRISPQRNPSV
GAESPFHPPHPYINPYMDYIRSLHSSPSISVLSATRGLSPADAPHTGLTTAEYYQHMALL
AGHRSPYTTDLLPSVASTAGAASASALHMEYLQAMENSRFSSPRLPSRPSRKRPLPISPL
SEHSFDLQTMIRNSPNSLVTMLNNSRSSSSTSGSYGHLSAGTISPALSFAYPPTPVALHV
HQQLLGRQPGLVGSAFGHSPPLMHPTPAFATQRPVPGIPPSGLSASERSAISNDSSQTKP
TSESAVSSTGDPMHHKRSKMKPEEEMPSPGAVSVQDHPDGMTLVKEEGDKDESKQEPELV
YETNCHWENCCREFDTQEQLVQHINNDHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHM
RRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQ
NRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDYPRPPPQPREPG
SNGQGRSPGQLPLGGYTDQREYNHATSKQDDCLQVKSIKTEKPMTSQPSPGGQSTCSSDQ
SPVSTYPCSGVQLAVSAGRSPGEGLEEDEEKEDNEEVAEEECECECERAPIMDSTVSTAT
AAMLTLQARRSVGRPVRWMEHIKMERLKQVNGALPRLGTLSPTPPPKGSTLPNILGKGSC
LGRQSGVSAPQPPIHAELGSTELTVLNLLRDRRDSSGSATSSAYLSSSRRSSGISHCFSS
RRSSQASQNEGTMAGTHHRRLHNLSSTDSYDPISTDASRRSSEASQYGGGVGGGGGGLFS
FGGCGGVGGVGIGGGAGSRGMLNLTPAQHYHLKAKYAAATGGPPPTPLPNMERMSLKTRM
AMMDDGGSNHCLPPLVRPHHCGDGTNGYTNGYTGHAGYRRRVLYPGEGPLNGNRRASDPV
RTQAPDMCNLPPVQRFNSLNNLHPLPPLSHHSTPETRNFSLQNYTRSEGNLQRGLQHSPY
TPSIAEHAALEALAMEDDREAGLLLEDEDMLPDDLVQYLHSQVDGGSYMHIEDQIASNQR
DASHPSAEEMEQIQTSGLNLAFPGCHSLQQQQQMAERKSPSKLPIQWNEVSSGSADRSPQ
RAQNHHSQCGRWSGTEHNVSAPFGRFGNMVVQQQVPVDFQNSCSQANQPESAYCSPTVKL
ENQRNSCMRGTSHNSANIFGRPNFSETVDEPLLQGFKQQVSIGPPKQSHFEQNHNSSTSC
QVGNHLNLNRGSMDNLHSLSQGATLHHSRQIHVPRPPMNSYRNMVRTQQYLNAESANEIQ
ASLNQQQQLQRNGDHCSLAHQVSGLKLEAPDHGYLEQVNGDCLSYEAADHKASSFPVLED
QCLLDSMAESARQGGGSGNSAALLSPGADQVTSTVDGNVPGVLDEGVSLDFGVMLEDGYD
QGSLVSGVLSPSIFQGLSRTSSRLTTPRASATFHSVAPGLNNMAIGDMSSLLTTLAEESK
FLAIMQ
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagtcgcaggccagttcagcagctgagaagaagaagagagttgagaccatt
gtggcgaccaagggctcatcagtgcgcaatgacatcagcgagaaggccgtggcctccagt
accacctcaaacgaagacgacagctcaggtacaccttaccaccgtgagaggcgcaatgcc
atcagctctcgggccccagccaacgaggagccctccacctccacagaggaacggccatcg
ctgctcaagaaggagctgcatggttccctgccccacctggttgaccacggcttgccgtac
cgaggcactctgttcgccatggacccccgcaatggctacctagagtcgcactatcctgca
ccacagttcttccctgccttccatcctcctgtgcccattgacgacagacatgcccaggga
cgatacatctacgatccctcccctgtgccccctcttcacgtgcctccttcgctggcaggc
agtccggctttctccgacatctccctcatccggatctcgccacagcggaacccctccgtg
ggggcggagtcgccctttcaccctccgcacccctacattaacccatacatggactacatc
cgctcactgcacagcagcccctccatctccgttctgtcagccacccgaggcctcagcccc
gcagatgcccctcacacaggcctgaccacagctgagtactaccaacacatggccctgctg
gcgggccaccgtagcccgtacacaaccgacctgctcccttctgtggcgtccacagccggc
gctgccagcgccagtgccctgcacatggaatacctgcaggcgatggagaactctcgcttc
tcgagcccgaggctgccatcacggcccagcaggaagcgccccctgcccatctcgcccctc
tccgagcacagcttcgacctgcagaccatgattcgcaactcccccaactcgctcgtcact
atgctgaacaactcgcgctccagctcctccaccagcggctcctacggtcacctctctgca
ggaaccatcagcccagcgctaagcttcgcctaccctccgaccccggtggctttgcacgtg
caccagcaactgctcggccgccaaccgggcctcgtgggatctgcgttcggccacagcccg
cccctcatgcatccgacgccagccttcgccacccagaggcccgtacctggcatccctccc
tccgggctgagtgctagcgagcgctcagccatctccaacgactcctcgcagacgaaaccc
acgagtgaatctgcagtgagcagcaccggagacccgatgcaccacaagcgctccaaaatg
aagccggaggaagagatgccgagcccgggtgcagtgagcgtgcaggaccatcctgatggc
atgaccctggtgaaggaggaaggagacaaggacgagagcaaacaggagccagagttggtt
tacgagacaaactgccactgggagaactgctgccgcgagttcgacacacaggagcagctc
gtacaacacatcaacaacgaccacatccacggggaaaagaaagagttcgtgtgccggtgg
gaggaatgctctcgagagcagaaacccttcaaggctcagtacatgctggtggtccacatg
cgcaggcataccggggaaaagccgcacaagtgcacattcgagggctgcagcaaggcctac
tcccgtctggaaaaccttaagactcacttacgctcccacactggagagaaaccatatgtg
tgtgagcacgagggctgcaacaaggccttttccaacgcctccgatcgggcaaaacatcag
aatcgcacacactccaatgagaaaccgtacgtgtgcaaaatccccggctgcaccaagcgc
tacacagaccccagctccttgcgcaagcacgtgaagacggtgcacgggccggaggcgcac
gtcaccaagaaacagcgtggagattacccgcgccctccgccccagccacgggagccaggg
agcaacggccagggccggtcgccggggcaactgcccctgggcgggtacacagaccaaagg
gagtacaaccacgctacctcaaaacaagatgactgtctgcaggtcaagtccatcaagaca
gagaagccaatgacgtctcagccaagccctggcggtcagtctacatgcagcagtgaccag
tcccccgtcagcacctatccctgcagtggagtccagcttgctgtgagcgccggacgctcg
ccaggggaggggctggaggaggacgaggagaaagaggacaacgaagaggtggcagaggag
gagtgcgagtgcgagtgcgagcgggcccccatcatggactccacagtctccacggcaacc
gcggccatgctgaccctgcaggcaaggcgaagtgtcggccgccccgtgcgctggatggag
cacatcaagatggagaggctgaagcaagtgaacggagcactgcccaggctggggaccctg
tcccctacaccgccccccaaaggctccacattgcccaacatcctggggaagggatcctgt
ctgggcaggcagtcgggggtgtctgctcctcagccacccattcatgctgagctgggaagc
acagagctaacagtgctcaatttgctccgggaccggcgtgacagcagcggcagcgcgacc
agttcggcctatctgagcagcagccgacgctcctctggcatctcccactgcttctccagc
cgacgctccagccaggcttcccaaaatgagggcacaatggcaggcacccaccaccgccgc
ctccacaacctcagctccaccgactcttacgaccccatctccactgatgcctcccgccgg
tccagcgaggctagccagtacggaggtggggtaggaggcgggggtggagggctattctca
tttgggggctgtggaggtgtaggaggagtaggcataggaggaggagctggctcacggggg
atgctcaatttaaccccagcacagcactaccacctgaaagccaagtatgcagcggcaact
ggtggcccaccccccacgcctctgcccaacatggagcgcatgagcttgaagactcgcatg
gccatgatggatgatggtgggagcaaccactgtttgccacctctagtccggccacatcac
tgcggcgatggcaccaacgggtacaccaatgggtacacgggacacgcagggtacaggagg
agggtcctctatcctggtgaggggccactgaatgggaaccgcagggccagcgacccagtc
cggacgcaggctcctgatatgtgcaatctgcccccggtgcaacgtttcaacagccttaac
aacctccaccctcttccccctctgtctcatcattctacgcccgaaacgcgtaactttagc
ctacagaactacacacgctcagagggcaacctgcagagaggtctgcagcactcaccgtac
actcccagcatcgcagaacatgcagccttagaggccctggccatggaggatgacagggag
gctggcctgttgcttgaggatgaggatatgctaccagatgaccttgtgcagtatctccac
tcccaggtggacggcggctcctacatgcacatcgaggaccaaatagcttctaaccaaagg
gacgcttcacatccatctgcggaggagatggaacagatccagacatcagggttgaattta
gccttccctgggtgccatagtctccagcagcagcagcagatggcagaaaggaagagcccc
agtaagcttcccatccagtggaatgaagtgagctccggtagtgctgacaggtctcctcag
agggcacaaaaccatcactcccagtgtggaaggtggtcgggcacagagcataacgtatct
gcaccttttggtaggtttggtaacatggtagttcagcagcaagtgcccgttgatttccag
aacagctgctctcaagcaaatcagcccgaaagtgcttactgcagcccgacggtgaagcta
gagaatcagcgtaactcctgcatgagaggtactagtcacaactccgccaacatctttggt
aggccgaacttctcagagaccgttgatgagcctcttctccagggcttcaaacagcaagtc
tctattggacctccgaaacagagccacttcgagcagaaccacaacagcagcacctcttgt
caggttgggaaccacctcaaccttaacaggggctccatggacaacctccacagcctctcc
cagggagccacccttcaccacagtcggcagatccatgtccctcgccctccgatgaacagt
tacaggaacatggtcaggacccagcagtacctcaatgccgagagcgccaatgaaatccag
gcaagcctcaaccagcagcaacaactgcagaggaacggggaccactgttccctggcacat
caggtatctgggctgaagctggaggccccagaccacggatacttagagcaggtgaatggt
gactgcctctcttatgaagcagcggatcacaaggcgtcctccttccctgtcctggaggac
cagtgcctgctggactccatggctgagtcagcgaggcaaggtggcggcagtggcaactcg
gcggctcttctctcccctggcgcagaccaggtgaccagcacggtggatggcaacgtgcct
ggtgtgctcgacgagggggtgagcctggactttggtgtcatgctggaggatggctacgat
cagggcagcttggtgtcgggggtgttgagtccctccatctttcagggtctgtccaggacc
tcatcacgcctgaccacccctcgagcgtccgccaccttccacagtgtcgcccctggcctc
aacaacatggccatcggggacatgagctctctcctcaccacgctggccgaggagagcaag
ttcctggctatcatgcagtag
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