Hippoglossus stenolepis (Pacific halibut): 118098750
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Entry
118098750 CDS
T08308
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsp01001
]
118098750 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118098750 (prpf4bb)
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118098750 (prpf4bb)
Protein kinases [BR:
hsp01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
118098750 (prpf4bb)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118098750 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
118098750
NCBI-ProteinID:
XP_034998744
LinkDB
All DBs
Position
19:complement(15888574..15896641)
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AA seq
1031 aa
AA seq
DB search
MADVEMDIASSRMNNGNEHVTIIEDCSLSNKKPDLESQEKSGNEDSGEMSEEEEEEEEGE
EGEAETNGEKTVEGPKHHSSSGKHKRKKHKHRSKHKKHKHTFDEDKDRKRRHRHKHRKHK
RKEGASPSAAVLLSGTSSHKKVETSPSSGNPSLDDRALLEDLEKQRAMIKAELDSQMMEG
KVQSGMGLILQGYNSGSEEDGEARVRNGEQRQRGSSGKPISPRGGKGGKSRRDSTEGGKS
SAKRRSKSADRPAKESKQDKVTKSTKDTGVKDRGRGRSRSKDRKCSDSADRSKERRKSNS
PSTWRGEEKGGRTDKRSSPQREDRSIPERPTRRSRSPGRERPSRPDADRDKRPAKSPSKD
ASSGKENRSPYRRGPQSPARKRSPSPRQRDARQPAASAVDRTSKQSNSPSRIRSPPRRGR
SRSPDLRRRDIDRQESPLRKRMRADVGPGRDRSRENSPRAAARRRMSRSPLRRRSLSPRR
RSRSSPRRRSRSPLGYRAGDRDRYGRPRQYRRSMSRDRDRRRRRSRDEDKFKGSLSEGMK
VDKESSGEEVLEDFDGEEVDEEALIEQRRQQRLAIVQKYKVGNDDSNMVSEPSSPQSSTR
SRSPSPDDILERVAADVKEYERENLNTFEANIKAKHNLIAQEKDGANPKKPSAPDMFIES
DDMFAADFDSARMRAAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQG
VFSNVIRARDTARGGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRH
FYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADI
KPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVG
CTLTELYSGKILFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDK
VTEREKVTVMSTINPTKDLLADMIGGQRLPEDQRKKVMQLKDLLDSTLMLDPAKRISINQ
ALQHPFIQEKI
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtagaaatggacatcgcgtccagcagaatgaataatggcaacgaacacgtc
accatcatcgaagactgttccctgtcaaacaagaagccggatctggaaagccaggaaaaa
agtgggaatgaggacagtggagagatgtctgaggaagaggaagaagaagaggagggggaa
gagggagaagcagaaaccaatggcgagaagacagtggaggggcccaagcatcacagcagc
agcggtaaacacaagaggaaaaaacacaagcatcgtagcaagcacaaaaagcacaaacat
acctttgacgaggacaaggaccgcaaacgcagacatcgtcataaacacaggaaacacaag
cgcaaagagggcgcctctccctctgctgctgttctcttatctggcacctccagccataaa
aaagttgaaacctccccctcctctgggaatccgagtctagacgacagagccttgctggag
gatttggagaaacagagagcgatgatcaaagctgagcttgacagccagatgatggagggc
aaggttcagtccggcatgggcttgatccttcaggggtataactctggatcagaggaggac
ggagaagccagggtaagaaatggagagcagcgtcaaaggggcagttcaggcaaacccata
tctcccagaggaggaaaaggtgggaaatcgagacgggactcaaccgagggcggtaagtcc
agcgccaagcgtcgcagtaagtcagcggacaggcctgctaaggagtccaagcaggacaag
gtgaccaaaagcaccaaggacacaggggtaaaggacagaggccgtggcagaagcaggtct
aaagacagaaagtgttcagacagcgccgataggtccaaggagagaaggaagtccaactct
ccctctacatggagaggagaggagaaaggcggccgcactgataaacggtcctctcctcag
cgggaagacagatcaatcccggaaagaccaacccgacggtcccggtcacctggacgagag
cggccgagtcgtcccgatgccgaccgggacaagcggccggccaagtctccatccaaggac
gcttcatcggggaaagagaaccgctcaccttacagacgaggacctcagagccccgcgagg
aaacgcagtccttcccctcgccagagagacgcccgccaacccgcggcgagtgccgtggac
aggacttcaaaacagagcaactctccatccagaataaggtccccacccaggagaggccgc
agtcgttcaccagatctgaggaggagggacatcgacaggcaggagtcaccattaaggaaa
cgcatgcgggcagatgtagggccgggtcgggacaggtcacgagagaacagtcctcgagca
gccgctcgccgcaggatgagtcgctcacctctgagacgaagatccctgtcaccacgacga
cgctcccgctcttcccctcgccgacggagcaggtctccactgggatacagggctggagac
agagaccggtatggtcggcccaggcagtaccgccgctcaatgtcacgcgatcgggatcga
aggaggcggcgcagcagagatgaagacaagttcaaggggagtctgtcagagggcatgaag
gtcgacaaggagtcctccggggaagaagtcctggaagactttgacggggaagaagtagat
gaagaagctctgatcgaacagcgtcgccagcagcgcctggccattgtccagaaatacaaa
gtggggaacgatgatagcaacatggtgtcggagcccagcagcccccagagcagcacacgc
agccgctcgccctcgcccgacgacatcctggagcgagtcgctgcagacgttaaggagtat
gaacgcgagaatcttaacaccttcgaggccaacatcaaagccaagcacaacctcatcgcc
caggagaaagacggagccaatccaaagaagccttcagcccccgacatgttcatagagtca
gacgacatgtttgctgcggactttgatagtgccaggatgagagcagcaggcgtagggaag
gacttcaaggagaaccccaacctcagggacaactggacggatgctgagggttactaccgg
gtgaacattggggagacactggacaagcgctatgatgtgtatggttacaccggccagggc
gtgttcagcaacgtgatcagggccagggacactgcaaggggcggccaggaggtggcagtc
aagatcatacgaaacaacgagctcatgcagaagacgggtttgaaggagttagaattcctc
aagaagctgaacgacgcagatcccgatgacaagttccactgccttcgtcttttcagacac
ttctaccacaagcagcatctgtgtctggtattcgagcctctcagtatgaatttacgagag
gtgctgaagaaatatggcaaagatgtggggctccatatcaaggctgtgcgatcctacagc
cagcagctcttcttggctctcaagctgctcaaacgctgcaacatcctccacgctgacatc
aagccggacaatatcctggtgaatgagtcaaagaccattctgaagctctgtgacttcggt
tctgcgtcccacgtcgcagacaacgacatcacaccgtacctggtcagcaggttctaccga
gctccagaaatcatcatcgggaagccgtacgactacggtattgacatgtggtctgtcggc
tgcacactgaccgagctctacagcggcaaaatcctgtttcctggatcttccaacaatcac
atgatcaaactggcgatggacctgaagggcaagatgcccaacaagatgatccgtaaaggt
ttgttcaaagaccagcacttcgatcagaacttgaacttcctgtacattgaagtggacaaa
gtaacagaaagggaaaaggtgacggtgatgagcaccatcaaccccaccaaagacctgctg
gcggacatgataggaggccagcgtctgcctgaggaccagaggaagaaggtgatgcagctg
aaggacctgctggactccaccctgatgctggacccagccaaacgcatcagcatcaaccag
gctctgcagcaccccttcatccaggagaagatctaa
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