Hippoglossus stenolepis (Pacific halibut): 118098830
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Entry
118098830 CDS
T08308
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118098830 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsp03032
]
118098830 (pola1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118098830 (pola1)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
118098830 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
118098830
NCBI-ProteinID:
XP_034998888
LinkDB
All DBs
Position
19:complement(10259575..10307723)
Genome browser
AA seq
1473 aa
AA seq
DB search
MAPVSNPDKDTEAQGAEDGGDSCGLARSRSRREKKEKLGRKSALEQLKKAKKGEKVKYEV
EEFTSVYEEVDEDQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVENKKGKA
GAKGAGSKKNVTKAAVSKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHSEKPS
PLAALPVVTLKKKKSLGSPLNPFSIKPQMPKESPSATGLKSKVIRPPLSHPSPRTSAVPP
PSKPALPSEKQRVKELDDEEVNDSLAFDGVDFDEPMEVGLEEQKPVVTEDAEPGSKVGAV
AAVKVEPKAECPDPVLMSSRIGGSWGQEEEGGVTEAQAEVQVDSSKLPLAEGPDGEQVFR
FYWLDAFEEPYSKPGVVYLFGKVWIESAKSHVSCCVSVKNIERTMYLLPREYKVNPKTGE
VSDTPVGMMDVYQELNELSEKFRIMKFKSKKVDRNYSFEIPDVPSQCEYLEVRYSAEFPA
LPTDLKGATFSHIFGTNTSSLEHFLLSRKIRGPCWLDIKTPQLLSQPVSWCKVEALALRS
DLVSVVKDLTPPPITVMSISLKTIQNTKTHHNEIVSLAALVHYEFHMDKSAPQPPYQNHF
CVVSKPGDCIFPYDFKEAIRKKNGKVEIAATERTLLGFFLAKMHKIDPDVLVGHDIFGFD
LEVLLQRINVCKVPHWSKIGRLRRSNMPKLGGRGSFAEKSATCGRLVCDVEISAKELIRC
KSYHLTELTAQVLKTERVTIPQEEIKNLYSDSPHLLYLLELTWTDAKLILQIMCELNVLP
LALQITNIAGNVMSRTLMGGRSERNEFLLLHAFHEKNYIVPDKPSFKKAQLAMVDGEDDM
DAGKNKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAHNT
RKKNEVNEPEEIPEVPDSTLEMGILPKEIRKLVERRKQVKQLMKQQDINPDLYLQYDIRQ
KALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMNTKDLVQKMNLEVIYGDTDSI
MINTNSRSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVENHGEG
QYTVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDLSRDIIVENIQKHLVETGEKVADG
TIPLNQYEINKALTKDPQDYPDKKSLPHVHVALWMNSQGGRVKAGDTVSYIICKDGSTLA
ASQRAYALEQLQKQEGLSLDTQYYLAQQIHPVVSRICDPIEGIDSVLIATWLGLDPSQFR
AQQQHQREEEADGTLGAPVQLTDEERYKDCERFTFTCPECGTDNTYDNVFEGAGLKLEPS
LMRCCHNPCGSRPVDFTVNISNKLLLDIRRYIKKYYSGWLVCEDLTCQNRTRRLPIAFSR
HGPICPACTRATLRPEYSEKALYNQLCFYRFIFDWDYAVTKVLQGDEKILLSRWMKEKEV
YRRLKEVSDKALATSGYSEINLAKLFQAFSTLK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtgtccaaccccgacaaagacacggaggctcagggcgccgaggatggaggg
gactcctgcggtctggccaggtctcgttcccggcgggagaagaaggagaagttgggcagg
aagtctgcgctggagcagctgaagaaggccaagaagggggagaaggtcaaatatgaagtg
gaggagttcaccagtgtttacgaggaggtggacgaggatcagtactcaaagatggtacga
gagcgacaagaggatgactggattattgatgatgatggaacaggatatgtggaggacgga
cgagaaatcttcgatgacgatttggatgatgacgtagtggaaaacaaaaaaggaaaagca
ggtgctaaaggagccggctcaaagaaaaatgtgacgaaagctgccgtctctaagcccaac
accattaagagcctcttcatgaacagtaatgtcaagcgaccggctgagaaagacgtggac
ctttccaaagatgacttattaggagacatcctacaggacctgcactctgagaaaccaagt
cctttggcagctctgcctgtggtgactctgaagaaaaagaagtctcttggatcacccttg
aatccgttttccatcaaacctcaaatgccaaaggagtcaccctcagctacagggttaaag
tccaaagtgatccgcccgccgctttctcacccgagcccaaggacatcagctgttcctcct
ccctccaaacctgctcttccttcagagaagcagcgggtgaaggagctggatgatgaggaa
gtaaatgactctctggcgtttgatggtgtggacttcgatgagccgatggaggttggactg
gaggagcagaagcctgtagttactgaggatgctgagcctggatctaaagtcggagcggtg
gctgcagtgaaagtggagcccaaagcagagtgtccggatcctgtcctcatgtcgagcagg
atcggaggctcctggggacaagaggaggagggcggagtcaccgaggctcaagcagaggta
caggtcgactccagcaaactccccctagcggaggggccagacggggagcaggttttccgt
ttctattggttggatgcatttgaagagccgtacagtaagccaggtgtggtgtacctgttt
ggaaaagtgtggatcgaatctgcaaagtctcacgtcagctgctgcgtttctgtcaagaac
atcgagcggaccatgtacctgctgcctcgggaatacaaagtaaatcctaagactggggag
gtgtcggatactcctgtcggaatgatggacgtttaccaggagttaaacgagctctctgag
aagttcaggattatgaagttcaagtccaagaaagtggacaggaactactcctttgaaatt
cctgatgtgcccagtcagtgcgaatacctggaagtcagatattctgctgagtttcctgcg
ctgcctactgacctgaagggggcaaccttttcccacattttcggtaccaacacctccagt
ctggagcacttcctcctcagcaggaagatcagagggccttgctggctcgacatcaagact
ccacagctgttgagccagccggtgagctggtgtaaggtggaagctctggccctgagaagt
gacctggtctctgtggttaaagacttgactcctccgcccatcactgtcatgtccatcagc
ctcaagacgatccagaacaccaagacacaccacaatgagattgtgtctctggctgcgctc
gttcactatgagttccatatggataaatctgcacctcaacctccctaccagaaccacttc
tgtgtggtcagtaaaccaggagactgtatcttcccgtacgacttcaaagaggcgatcagg
aagaagaatgggaaggtggagatagctgccacagagcgaactctgctcggcttcttcttg
gccaagatgcacaagattgaccctgatgtgctggtgggccatgacatctttggttttgac
ctggaagtgcttctgcagaggatcaacgtgtgcaaggttccgcactggtctaagattgga
cgccttcggaggtcaaatatgcccaaattaggtggtcgtggttcctttgcagagaagagc
gcaacatgtggccgactagtgtgcgatgtggagatctcagccaaggagctgattcgctgt
aaaagttatcacctgactgagctgactgcacaggtgctgaagacggagagagtcaccatc
ccgcaggaagagatcaaaaacctctacagtgactctcctcacctgctctacctgttggag
ttgacatggacggacgccaagctgatcctccagatcatgtgtgagctcaacgtgctgccg
ctggctctgcagatcaccaacatcgccggcaatgtcatgtctcgtactttgatgggcggt
cgctctgagaggaatgagttcctgttgcttcatgccttccatgagaaaaattacatcgtc
ccggacaaaccctccttcaaaaaggcccagctggcgatggtcgatggagaggatgatatg
gatgcagggaaaaacaagcggaagaagaaggcagcctatgctggaggtctagtgctggat
cctaaagttggtttctatgataagtttgtgctgctgctcgacttcaacagcctgtatccc
tcaatcatccaggagttcaacatctgcttcaccactgtgcagagggaagctcacaacacc
cggaagaagaacgaggtgaacgagccagaggagattcccgaggttccagattccaccctg
gaaatgggaatcctgccaaaggaaatcaggaagctggttgagcggagaaaacaagtgaaa
cagctgatgaaacagcaagacatcaacccggacctttacctgcagtacgacatccgtcag
aaggctctgaagctgacggctaacagcatgtacggctgcctgggattcagcttcagccgt
ttctacgccaagccactcgctgccctggtcacacacaagggtcgagagattctgatgaac
acaaaagacctggttcagaagatgaatctggaagtcatctacggagacacggactcaatt
atgatcaacaccaacagccggtctttggaggaggtgttcaaactcggcaataaggtaaaa
gccgaagtgaacaagctctacaaactgctggagattgacatcgacggcgtgtttaagtcc
ctcttactgctgaagaagaagaaatacgcagccttggttgtggagaatcacggcgaagga
cagtacaccgtcaagcaggagctcaaagggttggatattgtccgcagagattggtgtgac
ctggccaaggaatgtggaaactatgtgattggtcagatcttgtcggacctgagccgtgac
atcattgtggagaacatccagaaacacctggtggagacgggagagaaggtagcagatgga
accatacctctgaaccagtatgagataaacaaggcactgactaaagatcctcaggactat
ccagacaagaagagcctccctcacgtccacgtggctctatggatgaactctcagggcgga
cgggtcaaagctggagatacagtctcttacatcatctgtaaggatggctccacactcgca
gccagtcaaagagcctacgctttagagcaactccagaagcaggagggtctcagtctggac
actcagtactacctggcccagcagatccaccctgtggtgtctcgcatctgtgaccccatt
gagggcattgacagcgtgctcatagccacgtggctgggtctggaccccagccagttccgg
gctcagcagcagcaccagagagaggaggaggctgacggcacgctgggagctccggtccag
ctgactgatgaagagcgctacaaagactgtgagaggttcactttcacctgcccagagtgt
ggcactgacaacacctacgacaacgtctttgaaggagctggtttaaagttggagcccagc
ttaatgcgatgttgtcacaacccctgtgggagccgccccgtcgacttcaccgtcaacatt
agcaacaaactgctactagacatccgtcgctacatcaaaaaatactactctggctggctg
gtgtgtgaggacctgacctgtcagaacaggaccagacgtttacccatcgccttctcccgc
cacggacccatctgccccgcctgcaccagggcgacgctcagacctgagtactccgagaag
gccctttacaaccagctctgcttctacagattcatctttgactgggactatgccgttacc
aaagtcctacagggtgatgagaaaattcttctttcccggtggatgaaggagaaggaagtg
tatcgcaggctgaaggaagtgtcggacaaagccttggccaccagcggctactcggagatt
aacctggccaaactcttccaggccttctccaccctcaagtaa
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