Hippoglossus stenolepis (Pacific halibut): 118098917
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Entry
118098917 CDS
T08308
Symbol
boc
Name
(RefSeq) brother of CDO
KO
K20020
brother of CDO
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118098917 (boc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118098917 (boc)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Other
118098917 (boc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
Fn3_ROS1
C2-set_2
Ig_5
Ig_4
Fn3_VIN3
G6B
Fn3_PBP1
Ig_PDGFR_d4
Ig_6
Motif
Other DBs
NCBI-GeneID:
118098917
NCBI-ProteinID:
XP_047193798
LinkDB
All DBs
Position
19:12518163..12544968
Genome browser
AA seq
1053 aa
AA seq
DB search
MFGTRDWTPWMKKRRAPVLCALGAVLLCCLQSGASVSDEVPVFTEEPLSVVQKLGGSVNL
RCRARPASANISWRLNDQELVDGDVGVVLGPVGLFIPALSNLTLGRYQCVASTGAGALAS
VPANVTAAKLRDFEPDDQQDIEVDEGNTAVIECHLPESQPKAQVRYSVKQEWLETSKGNY
LIMPSGNLQIANATQDDEGPYKCAAYNPITQEVKTSTSADRLRIRRSTSEAARIIYPPAS
RSIMVTKGQRLVLECVASGIPTPQVTWAKDGQDLRFHNNTRFLLSNLLIDAVGESDSGTY
ICRADNGIGSASSATVLYDVQVFEPPHVTVELQQPEVVYGETVRITCQARGKPTPAVMWL
HNARPLAPSPRHRLTPRMLRVFNVGPQDDGLYQCMAENGVGSSQASARLITVSTGISARG
KLPSIYRPLSPDKVLREQPPVRPGATGAMLPLDCSELPGQILPAEAPVILSQPRTGKADY
YELTWRPRHERGVPVLEYMVKYRKVGDPLAEWTSSSISGSLHKLTLAKLQPDSLYEVEMA
AKNCAGLGQPAMMTFRTGKGRKGQNDPPKTPAVPSPSLSPPEAPDKPTVSTATETSAYVT
WIPRGNRGFPIQSFRVEYKKVKKAGEDWVTAVENIPPSRLSVEITGLEKGTSYKFRVVAV
NVIGSSPPSAPSKAYTVVGGRTHERPVDGPYITYNEAINETTIILKWTYTPVNNTPIYGF
YIYYRPTDSDNDSDYKKDVVEGDKYWHYITDLQSETAYDIKMQSFNEKGESEFGNVVILE
TKARPNSPRTDPSQSPDTVSGLPSGLVPRPGDLPYLIVCIVLGTFILIIVAFIPFCLWRA
WAKQKQTSDLCFPAVATPVSSCQYTMVPLQGLALVGRCPLDAHMTAPHGVYPGNGEYIPN
GKPHHPTHCLPGLQQNEVDCDMECDTLLPRPLSNGHMPVYHYSTSGADHHQQTCCSPDDS
THQLLDSSHQLLDSLEVGGDGSFCDGDEVEDDGITQKSASFPLLSLEDEGIFTTPSSVAT
TPQSLDAGTIQEVSILPNEATPEDEGSDNTTDA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaacgagagactggactccgtggatgaaaaagagaagggctccagtgttgtgt
gctctgggtgcagtactactgtgctgcctacagagcggcgcctctgtctccgatgaggtc
cccgtcttcaccgaagagcccttgtccgtggtgcagaagttgggcggcagcgtgaacctc
cgctgccgcgcccgacctgcctccgccaacatcagctggcgcctcaacgaccaggagctg
gtggacggggatgttggcgtcgtgctcggccccgtcggcctgttcatccccgccctgtcc
aacctgacgctggggcggtaccagtgtgtggccagcaccggcgctggagccctggccagt
gtgcccgctaacgtcaccgctgccaagctgcgcgacttcgagcctgacgaccagcaggac
atcgaggtggacgagggcaacacggctgttatcgaatgccacctgcctgaaagccagccc
aaggctcaggtccgctacagcgtcaagcaggagtggctggagacgtccaaagggaactac
ctcatcatgccgtcagggaacctgcagatagccaacgccacgcaggacgacgaggggccg
tataagtgcgctgcgtacaaccccatcactcaggaagtcaaaacatccacctctgctgac
cgcctgcgcatccgccgctccacgtcagaagccgctcggatcatctatccgccggcgtct
cgctccatcatggtgaccaaaggccagcggctggtgctggagtgtgtcgccagtggcatc
cctaccccgcaggtcacttgggcaaaagatgggcaggacctgcgtttccataacaacacg
cgcttcctgctcagcaacctgctgatcgatgcagtgggcgagagcgactcgggaacctac
atctgccgggcggacaacggcatcggctcagcgagctctgccacggtgctctacgacgtc
caagtgtttgagcctccacatgtgacggtggagctgcagcagccggaggtcgtgtacggc
gagaccgtccgcatcacctgtcaggcccgcggcaagcccaccccggcagtgatgtggctc
cacaacgctcggcccctcgccccatctcctcgccatcgcctcaccccgcggatgctgcgc
gtcttcaacgtgggccctcaggatgacgggctgtaccagtgcatggctgagaacggggtg
ggcagctcgcaggcatctgcccgcctcatcacagtatcgactgggatttcagccagaggg
aagttaccctcaatctatcgaccgctcagcccggacaaggtgctgagggagcagccgccg
gtgaggcccggggccacaggggccatgttgcctctggattgttccgagctgccaggacag
atccttcctgcagaggcccccgtcatcctcagccagcctcgcacaggcaaggccgactat
tatgaactcacctggaggccgcggcacgagagaggagtcccggtgctggagtacatggtc
aaatacagaaaggtgggagaccctctagcagagtggacctccagcagcatctcaggctcc
ctccataagctgaccctggctaagctgcagccggacagcctgtatgaagtggagatggcc
gccaagaactgtgcaggtctgggacagcctgcgatgatgacattcaggaccggcaaaggt
cggaaaggtcaaaacgatccaccgaagactccggccgttccttccccgagtctctctcct
cccgaggcccccgacaagcccacggtctccacggcaacggaaacatccgcatatgtgact
tggattcctcgcggtaaccgtggcttccccatccagtcatttcgggtggagtacaagaag
gtgaagaaggccggagaggactgggtgacggcggtggaaaacatccctccgtcgcggctc
tcggtggagatcacgggcctggagaaaggtacctcttataagttccgtgtggtggcggtg
aacgtgatcggttccagtcctcccagcgctccctcgaaggcgtacactgtggtgggcggg
agaacccacgagcgccccgtggatggaccctacatcacctacaatgaagccatcaatgag
acgaccatcattctcaaatggacgtacactcctgtaaacaacacgcccatctacggcttc
tacatatactaccggcccacagacagcgacaacgacagcgactacaagaaggacgtggtg
gagggagacaaatactggcactacatcaccgacctgcagtcggagaccgcctacgacatc
aagatgcagagcttcaacgagaagggcgagagcgagttcgggaacgtggtgatccttgaa
acgaaggctcgtccgaattccccgcggactgatccatcccagtccccagacactgtttct
gggctccccagtggactggtgcctcggcccggcgacctcccctacctcatagtgtgcatt
gtcctgggaaccttcatcctaatcatcgtcgccttcatccccttctgcctgtggagggct
tgggccaaacagaagcaaacgtccgacttgtgtttccctgctgtggccacccccgtgtcg
tcatgtcagtacaccatggtgcctcttcagggactcgccctggtgggccgctgcccgctg
gacgcccacatgacggctccgcatggcgtctacccggggaacggagaatacattccgaat
ggaaaacctcatcacccgacacactgtctgccaggactgcagcagaatgaggtggattgt
gatatggagtgcgacactttgttgccacggccgctgtcaaatggacacatgcccgtctac
cactactccaccagtggtgcagatcatcaccaacagacgtgctgttcccccgacgactcc
actcaccagctcctcgactcttctcaccagctcctcgactcgctggaggtcggaggagac
ggcagcttctgtgacggagatgaagtggaggacgacggcatcactcaaaagtcggcgtcg
ttccctcttttatctctagaagacgaggggattttcaccacgccctcgtcggtggccacg
acgccgcagtcgctagacgcaggaacgatacaggaagtgagcatcctcccgaatgaagcg
acgcccgaggacgaagggagcgacaacacgacagatgcatga
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