Hippoglossus stenolepis (Pacific halibut): 118098924
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Entry
118098924 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: phthioceranic/hydroxyphthioceranic acid synthase-like
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
adh_short
PKS_DH_N
PP-binding
CurL-like_PKS_C
adh_short_C2
Thiolase_N
ACP_SdgA_C
ADH_N
RhiE-like_linker
AA_synth
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
118098924
NCBI-ProteinID:
XP_034999068
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All DBs
Position
19:16676663..16684310
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AA seq
2105 aa
AA seq
DB search
MEEAEDAIAVVGIGCNFPGGEGLENFWKVLLDGRNCSLPIPKKRFDLSAWYDPDENKAGK
SRTAKAALIDGFNDFDHKFFGISDSEVEQMDPQQKQLLQCVYRALENAGIPMEEASGTRT
GVFLGLMNRDYETNAAHLHPSVINHWTGTGLAMSIAANRVSYIFNFTGPSLTIDSACSSS
LVALHLACQSIKQGDCEMALCGGVNCIFEPRVFVALSKAKMISPEGTSRPFSSTADGYGR
GEGCGVVLLKPLKKALQDHDHIWGIISKTAVNQDGHSVTPMTKPSMTQQEELLRGIYSDS
DLVNVQYIEAHGTGTPVGDPTEAGSISNAIAKAKPPGSERLWIGSVKSNIGHTESAAGVA
GLIKVLLMMKHETIVPSVFYSEETDSVDAKALNIKVPQKAEKWEPPGARIAGVNNFGFGG
TNAHAVVKQYKQSPIRQEHDETQPKYFVMSAKSTKSLSLMMEDTVKQLEADSEVDLDSLL
YTSACRRSHLKHRYRKAIMVSSVVDLKDKLSAAVGKNISQAYSDPKLVFVFCGNGVTYHG
MCKQLLKQEPVFRSKIKEITELFKRLSGLNILDTLDSEFESSDFKNPEVVQPLLFATQVG
ITTLLRHWGVKPDAILGHSVGEVAAAHCSGVLSLEDAIKVIYFRSKLQSKVTGGMMLVIS
NMAVSEVTALLPSYSGRVCLAAFNSPQSCTLSGDADAIKSFHTELSASANGQNLFLRLLN
VPAAYHSHMMDPILTEIKDTIGLLQVNNLDTELFSTVTGKEVQQGDFCTGEYWARNIREP
VAFEQAVRLAAKGKKNTVFVEIAPRRALQRNIIESLDSDTAVLPSLQPGKDHETILSVVS
QLFELGVQVDWNTFYKGYETMPLPFPKYTFDCSDRDVIIGAAQANTPSNHPVLCQTGSES
NIFSCDLKSDSSFYLKEHKHNNIPIIPGAFYVELGLAAVMASAKPKVPLNSLQLSVNFHS
PCVLTQNSPDIKVKLEETKTETSFTVFSPSAVYASGTVVSKRERLIEEQSLSLSAIFKRC
KSVVSSQELYGYLSQGGFQYGDVFKNKGNVHYGEDLKEAFAVVTVPEELRSQLHDYCIHP
VVLDFLMQLLPVTVEHMFAGRPGFPAKIGSLTVFEPLQEEMIVYLRAVDVGLDHFEVCGC
FTDRDGRVLVEAKHVIIKYLGSHSHVVEEYFYHNSFSVIPDTIPSAPPPKALVFCDDMGI
SKGLRPHLDSKSQYIPVTHAKDILSNGFPSLLAKFNIQESKEKFDEVLFLWGQEDLTSQA
ADVALQKVVSCCEIFRQIVLELKQLHFPASIRAVTYRSSDVTVDHVNPGFGIVGMTRSFA
AEIPDLSFQLIDIDTVSAKDIAALSEVIRSYPCSKYPELVVKDGLIFKPSIVRTPPEVVD
SSGSSFTSTMSEHCILQTADAHEITQVSAIHFDEGDLPINDRAVEIRPSTICVHSSDFFP
VSATHLEFGPTLYWDKHSSQSHKLLALDFNGTVTAVGKEVRKLKVGDHVASCYPVVAASK
VRVPEDVCYSTKRFPFLQKTPCVSYYVLAWEILHRALPRAKHHLGIISPVPDSALTKVLA
LTSSKSGWNVVIGTQCNGSFVDVKQIDAFVILPPLEESLIDKICSFPRVQHVVIICESET
QCLLARNMFHSVKESIHLQTILIPAILQKGSLSAQRPHIYHWLKSLKLSRKFAVKNFTFQ
NVKSDSLDTFHPQKPESYFNSKTLAVVALNKDDGSVLSEIPLLPTKKLLFKKRAVYIVAG
GLSGLGFETVKFISQRGGXYVVILSRSKPTPDLEQEIHNVENQCGNCITSMECDVSVSEH
VHKVISAIGQKFPGCPVRGVFHSAVVLHDGLIETLDRSLYEKVLKPKVKGVLNLHHATLQ
CQLHYFVCYSSISAFLGNASQTNYAAANTFLDMFCHYRRKLGLPGQSINWGALNLGLLLN
KDHFQQFLEAKGMMVLNVAEVHRSLEQCLLINQPQQAVCRFHFRNIRFNILSQNASLTMR
LSALVEDALQKSNETVAQAKEAECVSPKEYVISLLTETIGMDPSDLKDDSLLSSLGVDSM
QAMTLQNLIFQARGVNVPLVKLLDPNATLSTVVALLSEGAEGENVSDDAVTSNSTKEMED
LSTRF
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctgaggacgcaatcgcagtggtgggcattggatgcaattttcctggagga
gaggggcttgaaaatttctggaaggttcttcttgatgggagaaactgttctttgccaatt
cccaaaaagaggtttgacttgtccgcctggtatgaccctgacgaaaacaaagcgggtaaa
tcccgcacagccaaggctgctctcattgatgggtttaatgattttgaccacaagttcttt
ggcatcagcgacagtgaagtggaacaaatggatcctcagcagaagcagctccttcagtgt
gtttacagagctttagaaaatgctgggattcctatggaggaggccagcggcaccaggaca
ggcgtgtttttaggtctaatgaacagagattacgaaacaaatgctgcgcacctgcacccg
agtgtgatcaaccactggactggaactggcctcgccatgagcatcgcagcaaacagagtc
tcatacatcttcaacttcactgggccgtccctgaccatagacagcgcctgctcctcgtcc
ctcgtggctcttcatctcgcttgtcaatccattaaacaaggtgattgtgaaatggctttg
tgtggaggtgtgaactgcatctttgagccaagagtgtttgtcgctctcagcaaggccaag
atgatttcacctgaagggacgagcagacctttctccagcacggcagacggctacggccga
ggggagggctgcggggttgttctactgaaaccactgaaaaaggctttacaagaccacgac
catatctggggtatcatcagtaaaacagccgtcaaccaagatggacactcagtcactccg
atgaccaaaccctccatgacgcaacaagaggagctgctgcgaggaatctactcagactcc
gaccttgtaaatgttcagtacatagaggcacatgggactggaaccccggtcggagaccca
acggaggcaggaagcatctctaacgccatcgctaaggccaaacctcccggatcagagaga
ctgtggattggctcggtgaagagcaacatcggacatacagaatctgcagccggagtggcc
ggactcattaaggttcttcttatgatgaagcacgagaccattgttccgtccgttttctac
tctgaagaaactgacagtgttgatgccaaagccctgaacattaaagttcctcagaaggcc
gaaaaatgggaaccgcctggtgcacgaattgcaggggtgaacaactttggctttggggga
acaaatgcacatgctgttgtcaaacagtacaaacagtcacccatcagacaagagcatgat
gagacgcaaccaaagtactttgtcatgtcagcaaagtcaacaaaatctctctctctcatg
atggaagacaccgttaaacagctagaggccgatagtgaagttgatctagattctctcttg
tacacgtcagcttgcagaaggagccatctcaaacatagatacagaaaagccatcatggta
tcatctgtggtcgatcttaaagataagttaagcgctgctgttggcaaaaatatcagccaa
gcctactccgatccaaagttagtgtttgtcttctgtggaaatggcgtcacttaccatggc
atgtgcaagcagctcctgaaacaagaacctgtcttcagaagtaaaatcaaagagattaca
gaactgttcaaaaggctgagtgggctgaacatcctggacacgcttgacagtgagtttgag
agtagtgacttcaaaaacccagaggtggtccaaccattgctctttgccacccaggttggc
attaccaccctactcagacattggggtgtcaagccagatgcaatacttggacactctgtg
ggtgaggtcgcagccgctcactgctctggcgtcttgtctcttgaggatgcgataaaagtc
atctatttccgcagcaagctccagagcaaagtcactggcgggatgatgcttgtgatcagc
aacatggctgtatcggaggtaactgctcttctgccttcttactctggtagagtttgcctc
gctgctttcaacagtccacagtcctgcaccctctcaggggatgcagatgcaattaagagc
ttccatacagagctaagtgcctcagccaatggtcagaatctgttcctgcgtctgctgaat
gtccctgctgcttaccacagccacatgatggatccaattctgacagaaatcaaggacaca
attggcctcttacaggtgaacaatcttgacacagagttgttctcaacagtgacaggcaag
gaggtccagcagggagatttctgcacaggtgaatactgggctagaaacattcgtgagcca
gtggccttcgagcaggcagtgcggttggcagcgaaaggaaagaagaacacagtttttgta
gagatagcaccaagaagggcactgcagcgaaacatcattgaatctctggatagtgacaca
gctgttcttccctctctgcagccagggaaagatcatgagacaatcttgtctgtagtttct
cagctgttcgaactgggggttcaggtcgattggaacaccttctataaaggatatgagaca
atgccgctgcctttcccgaaatacacgtttgattgttctgacagagacgtgattatcggt
gcagcacaagcaaatacaccaagtaatcaccctgtgctctgtcagacaggaagtgaaagc
aacattttcagctgtgatctgaagtcagactcttctttctacctgaaagagcacaaacac
aacaatatacccatcatccccggtgccttctatgtcgagttgggtttagccgcagtcatg
gccagtgccaaaccaaaagtaccactcaactctctacagctcagtgtcaacttccacagc
ccgtgtgttttaacgcagaattcacctgacattaaggtgaaactggaagaaaccaagaca
gaaaccagtttcacggtattctctccatctgcagtttatgcatcaggcacagttgtttcc
aaaagagagcggctgattgaggagcagagcctttcactgagcgccatcttcaaaagatgc
aaatctgtagtgagctctcaggagctctatgggtatttgtctcaaggaggctttcagtat
ggagatgtcttcaagaataaagggaatgtgcactatggagaagatctcaaggaggctttt
gcagttgtaacagttccagaggaacttcgatcgcagttgcatgactactgcatccaccct
gttgtgttggattttctgatgcagcttctcccagtcacagtagagcacatgtttgctggt
agaccaggctttcctgccaaaatcggaagtttgactgtgtttgaacctttgcaagaggag
atgattgtgtatttgagagcagtcgatgtgggtcttgatcactttgaggtttgtggctgt
tttacagacagagacggcagagtgttggttgaagcgaaacatgtgataatcaagtatctt
ggcagtcactctcatgtggttgaggagtacttctaccataactccttcagtgtcattcct
gacactatcccatctgctcctcctccgaaggccttggtcttctgtgatgacatggggatc
tctaaaggcctgcgaccacatttggactccaaatctcagtacataccagtcacacatgca
aaggatattttgagtaatggcttcccctccctcttggctaaattcaatatccaagagagc
aaggaaaagtttgatgaggtcttgtttctgtggggccaagaagaccttacttcacaggcc
gctgatgttgctcttcagaaagtggtgagctgctgtgagattttccgtcaaatcgtcctt
gagcttaagcaacttcactttccagcctctattagagcagtaacctaccgttcatctgac
gtcacagtagaccacgtaaatccaggttttggaatcgttggtatgaccagatcttttgct
gcagagataccagatctttcatttcaactcattgacatagatactgtctctgctaaggac
attgcagctctgtctgaggtcatacgatcatatccttgtagcaagtacccagagttggtg
gtaaaagatgggctgatctttaaaccttccattgtccgtactccgcctgaagtcgttgac
agttcaggatccagttttacctcaacaatgtccgagcattgcatccttcaaacagctgat
gcacatgagattacgcaagtgagtgccattcactttgatgagggggacctgccaatcaat
gaccgagcagttgaaatccgtcccagcacgatttgtgtccattcatctgatttcttcccc
gtcagtgctacacacttggaatttggcccgacactgtactgggataaacattcctcccaa
agtcacaagctgctggctcttgatttcaacggtactgttaccgcagttggaaaagaagtg
agaaaactgaaggtgggagatcacgttgcttcctgctatcctgtggtggcagccagcaag
gtcagggtcccagaggatgtgtgctacagcacaaaacgattcccattccttcaaaaaaca
ccctgtgtttcctactatgtgctggcatgggagatcctgcatcgagccttacccagagcc
aaacatcatctgggaatcatatcccctgttcctgactcggctctgaccaaagtcttggca
cttacttcctccaaatctggctggaatgtggttattggaacgcagtgtaatggttctttt
gtagatgtcaaacaaattgatgcatttgtcatcctgcccccacttgaagaatccttgatt
gacaagatttgcagttttccaagggtccaacatgtcgtcatcatctgtgaatctgagacg
caatgtttgcttgctcgaaacatgttccacagtgtgaaggaaagtattcatctgcagacg
attctgataccagccattttgcaaaagggatctttgagtgcccaaaggccacatatttat
cactggctcaaatccttgaagttgagcaggaaatttgctgttaaaaactttacctttcag
aatgtgaagtctgacagccttgatacctttcatcctcagaaaccagagtcgtacttcaac
tcaaagacactggctgttgtggctctgaacaaagacgacggcagtgttctgtcggagatc
ccactgctaccaacaaaaaaactgcttttcaaaaagagggcagtttatatagtggcaggt
ggtctttctggtctgggctttgaaacggtcaagttcatctcccaaagaggtgggnggtat
gttgtcatactctcccggagcaagcccacaccagatctggagcaagagatacacaacgta
gagaatcagtgtggaaactgcatcacgagcatggagtgtgacgtgtctgtctctgagcat
gtgcacaaggtcattagtgccattggccagaagttccctggttgtccagttagaggagtg
ttccacagtgccgtggtcctgcatgatgggctgattgagacccttgacagatcactgtat
gagaaagttctcaaaccaaaagtaaagggtgtattaaatttgcaccacgcaacactgcag
tgccagctacactattttgtgtgttactcctccatctctgcttttctgggaaatgcatca
caaacaaactatgcagcagccaacacgttcctcgacatgttctgtcattacaggcgcaaa
ctcgggctgcctggacagtccatcaactggggagcgctcaacctcggtctcctcttgaac
aaggaccatttccagcaatttctggaggcaaaggggatgatggtgctaaatgttgctgaa
gttcatagaagcttagagcagtgcctcctgatcaatcaaccccaacaggccgtttgcagg
tttcacttcagaaacatcaggttcaacatcctctctcaaaatgcatccttgaccatgcgc
ctgtctgcgttagttgaagatgctttgcaaaaatcaaacgaaacagttgctcaagccaaa
gaagctgaatgtgtctcgcccaaagagtacgtcatctctctgctcaccgagaccatcggc
atggatcccagtgatctgaaagatgactcacttctctcgtctttgggcgtcgactccatg
caggccatgactctgcagaacctgatctttcaggcgagaggagtgaacgtacctctggtg
aaactgttggaccccaacgccacattatcaacagtggtagctctgctgagtgaaggagcc
gaaggtgaaaacgtcagtgatgacgcagtgacgagtaactccacaaaagaaatggaggat
ctttcaactagattttaa
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