Hippoglossus stenolepis (Pacific halibut): 118098937
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Entry
118098937 CDS
T08308
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118098937 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118098937 (stau2)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118098937 (stau2)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118098937 (stau2)
mRNA cycle factors
Stress granule specific factors
118098937 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
118098937
NCBI-ProteinID:
XP_034999090
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Position
19:11117112..11198722
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AA seq
671 aa
AA seq
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MAQVKVQTSAPLAGPGLSPGVPPTAMASPGSLGLQPSVNGTGPAPTPACPAPAVGYGDAP
VSITPPGSPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLTLGE
QVWEAEGTSIKKAQHSTAAKALDESVLPRPAPRSPKVDINSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGTNEFIGDGRTRQAAR
HSAAMKALEALRNEPIPERPPQSPEEKGETEEGTDASKSEISLVYEIALKRNLSVNFEVL
KESGPPHMKSFLTRVSVGEFSANGEGNSKKLSKKRAALTILQDLKKLPFIPAVEKPKTHY
KKRTKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGMPRRREFIMQVKVNN
EVATGTGPNKKVAKRNAAEAMLLQLGYKASTVPQSPTEMDNKGWNGQKASFTEATSNTQK
GLLHLSPDVYQEMEASRKQGGSASGPCSSGNNGNSVNYIPSKDMGPCSAPLPPGHPPYYS
GSPSSPSPTATMARELLLNGQSPTADASLPIKGKNPALACGVSVQPAQQLDYLARIQGFQ
VQYTDAQSGKDFVTYLTLSPVQMTFHGTGSTLQASHDQAALSALKQLSEQGLDPVDGPIK
TSEPCGREDGH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtacagacctcagcacccctggctggtcctggcctctcccccgga
gttcccccgacggccatggccagcccaggatccctgggtctgcagccctccgtcaacggc
acaggcccggcccccacacccgcctgccctgctcctgcagtcggatatggggacgcccct
gtgtctatcacaccgccaggctcgccccaggagaacatggcaaaccctaaagagaaaact
ccaatgtgtttggtgaatgagttagcccgtttcaataggatccaaccacagtacaagctc
ctcaatgagagaggccctgcacacgctaagatcttcaccgtgcagctgactctgggggag
caggtgtgggaggcggagggcaccagcattaaaaaggcccaacactccacagccgccaaa
gccctggacgagagtgtcctccccaggcctgcgccccgctcccctaaagtggacatcaac
agtaacccaggcagtataacacccacagtggagctgaacggtctggccatgaagagagga
gagccagctatatataggcctttggatcctaaacccatgcccaactacagagcaaactac
aacttcagagggatgttcaaccaaaggtaccattatcctgttcctaagatcttttatgtg
caactctcagtggggactaatgagtttattggcgacggacgcacccgccaagcagcacga
cacagcgctgccatgaaggccctggaagccctgcgcaatgaacctattccagaacggcca
ccacagagcccagaagagaaaggggagactgaggaaggtactgatgccagcaaatcagag
atcagcctggtctacgaaattgccctcaagaggaatttgtctgtcaactttgaggtgttg
aaggagagcggccccccacacatgaaaagcttcttgactcgcgtctctgtgggggagttc
tctgccaatggcgaaggaaatagcaagaagctgtccaaaaagcgagccgctctgaccatt
ctgcaggacctgaagaagctgcccttcatccccgccgtggagaaacccaagacgcactac
aagaaacgcaccaaaaccatcctcaagacgggaccagactatggccagggcatgaacccc
atcagccgtctcgcccagatccaacaggccaagaaagagaaggagcccgagtacctgctg
ctctcagagagggggatgccccgacgccgggagttcatcatgcaggtgaaggtgaataac
gaggttgccacgggaacagggccgaacaagaaagtggccaagcggaacgcagccgaggcg
atgctgctgcagctgggatacaaggcctccacagtccctcagagccccaccgagatggac
aacaaaggctggaacggacaaaaggcgtcctttaccgaagcgacaagtaacacacagaaa
ggtctgctccacctcagccccgacgtctaccaggagatggaggccagcaggaagcagggg
ggcagcgcctcgggcccttgcagcagcggcaacaatggcaactccgtcaactacatacca
tccaaagacatggggccctgctctgccccgctgcccccaggacaccctccgtattacagc
ggctcaccctcttcacccagcccgactgctaccatggccagggagctgcttcttaatggc
cagtcacccactgctgacgcctccctgcccataaaagggaagaacccggctctggcctgt
ggcgtctcggtgcagcctgcacagcagttggactacctggctcgcatccagggcttccag
gtgcagtacactgatgcgcagagtggtaaggattttgtgacctatctgaccctctcccct
gtgcaaatgactttccacggcactgggagcaccctccaagccagccatgaccaggctgct
ctaagtgccttgaaacagctgtcggagcagggactggacccggtggacggccccatcaag
accagtgaaccatgtgggagggaggacggacattaa
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