Hippoglossus stenolepis (Pacific halibut): 118099035
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Entry
118099035 CDS
T08308
Symbol
vsnl1a
Name
(RefSeq) visinin-like protein 1a
KO
K19936
visinin-like protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118099035 (vsnl1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118099035 (vsnl1a)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
118099035 (vsnl1a)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
EF-hand domain-containing proteins
Calcium binding proteins
118099035 (vsnl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
Caleosin
Dockerin_1
WEF-hand
IL3
p25-alpha
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
118099035
NCBI-ProteinID:
XP_034999172
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All DBs
Position
20:4874942..4910680
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AA seq
191 aa
AA seq
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MGKQNSKLTPEVMEDLVKSTEFNEHELKQWYKGFLKDCPTGRLNLDEFQQLYVKFFPYGD
ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
MLEIIEAIYKMVGTVIMMKMNEDGLTPQQRVDKIFSKMDKNNDDQISLDEFKEAAKSDPS
IVLLLQCDLQK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacagaacagcaagttgacccctgaagtgatggaggacctggtgaagagcaca
gagtttaatgaacacgagctgaagcagtggtacaagggattcctgaaggactgtcccacc
ggcagactcaacctggatgagttccagcagctttatgtcaagttcttcccttacggtgac
gcatccaagttcgcccagcacgccttcaggaccttcgacaagaatggcgacggcaccatc
gacttcagagagttcatctgtgcgctgtccatcacatcgcgaggcagcttcgagcagaaa
ctcaactgggccttcaacatgtacgacctggacggagacggcaagatcacacgcgtggag
atgctggagatcatcgaggcgatctataagatggtgggcacagtgatcatgatgaaaatg
aacgaggacggcctgacgcctcagcagcgggtggacaagatcttctccaagatggataag
aacaacgacgaccagatctcactggacgagttcaaagaggcggccaagagtgacccgtcc
attgtactactgctgcagtgcgaccttcagaaatag
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