Hippoglossus stenolepis (Pacific halibut): 118099076
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Entry
118099076 CDS
T08308
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118099076 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118099076 (lrfn5b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
Ig_2
LRR_9
LRR_14
Sp38
LRR_EndoS
V-set
fn3
LRR_Zer-1
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
118099076
NCBI-ProteinID:
XP_034999239
LinkDB
All DBs
Position
20:complement(8022069..8035236)
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AA seq
800 aa
AA seq
DB search
MESLLVYLIVLGVAVKAHKVQVCPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKRKDFANMTKLVDLTLSRNTIGSIAPHAFKDLENLRALHLDSNRLARITND
TFSGMSKLHHLILNNNQLQHIHIGAFNDLTALEELDLSYNNLESAPWVAIQRMPSLHTLN
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLANSGIMGPLSFALSF
GGNPLRCNCELLWLRRLRREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVTLRCKARGDPDPIIHWIAPDGRLMSNSSRATVHTDGTLDILISTVKDSGSFTC
VASNPAGEAQQTVDLVIAKLPHITNNTIAEQEPDPGSSDIATVTKTGAGDAGGGVPLGNT
KTSPEKKVVIAEATSTSALVKFNFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKDILV
NNLAAGTQYDLCVLAIYDDQVTSLTATRVIGCIHFTTEPQYLRCHFMQSQFLGGTIVVII
GGIIVASVLAFIIFLIVRYRVCNQGDADKALEMGDIRSLSSDGQLQGCGVPKSLSKQVLR
PEKNDKECLRVSLPPPEPDKQRPPAVATTKPSVPDCTVSTSAASHSWHPASPGAPRPKRS
SAPPKPSEARRSEAQADVELENMNRNNSSEVKMATTVALAIPGQPTNWTAVPRVPRPHQP
PQQHYMTVPAGAVRVNRRHSLNTDSYREHCYVAYPKTGASLRSKRSLSMSVELPQLESTT
NIHRARDKLSRSEWLLESTL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctcctggtttacctgatagttctcggggtggctgtcaaagcccacaaagtt
caagtctgccccaaacgctgcgtctgccagatgctcaaccccaacctggcgactttgtgc
gacaagaaggggctgctgtttgtgcccccgaacatcgataggcacacggtggagatgcgt
ctcggggataactttgtaaccagcatcaaacgcaaagactttgctaacatgaccaagctg
gtagacctgaccctctctcggaacactattggctccatcgcacctcatgccttcaaagac
ctagagaacctacgagctcttcacctcgacagcaaccggctagcccgcatcaccaacgac
accttcagtggcatgtccaagctgcaccacctcatcctcaacaacaaccaactccaacac
atccatatcggggccttcaatgacctcacggcattggaggagctggacctatcctacaac
aacttggaaagcgcaccatgggtggcaatccagaggatgcccagtcttcacaccctcaat
ttagaccacaacatgctcagctacatcccagaaggaaccttctctgggctgcagaagctc
aaacggctggatgtgacctccaacaagctccagaagcttcctcctgaccccgttttccaa
agagcaggggtcctggccaactctgggataatggggcctttgtctttcgccttgagcttc
ggaggtaatcctctgagatgtaactgtgagctgctctggcttcggagattgcggagggag
gatgatctggagacctgcgcttcaccgcaacaccttgctggacgctacttctggaccgtc
tcagaggaagagttcctgtgtgagccccctctcatcaccaggcactctcaggagctgcga
gctttggagggtcagagcgtgactctgcgctgcaaggccaggggcgaccccgatcccatc
atccactggatcgcccctgatggccgccttatgtctaactcctccagggccacggtccac
accgacggcacgttggacatcctcatcagcaccgtgaaggactctggctccttcacctgc
gtggcctccaacccagccggcgaggcccagcagaccgtggacctggtcatcgctaaactc
cctcacatcaccaacaatacaatcgcagagcaggagcccgaccccggatcatcagatatc
gccacggtgaccaagacaggcgcgggagacgctggaggaggggtgcccctggggaacacg
aagacgagcccggagaagaaagtggtaatcgcagaggccacgtccacctcggccctggtc
aagtttaacttccagaggagtatccctggaatccgcatgttccagatccaatataacggg
acatacgatgattctctggtgtacagaatgattcctccgactagtaaagacatcctggta
aacaacctggcggctggtactcaatacgacctgtgcgtgctggccatctatgacgaccag
gtgacctcactgactgccaccagggtgatcggctgcattcacttcaccacagagccacag
tacctgagatgccatttcatgcagtcccagtttctcggcggcaccattgtggttattatc
ggagggattattgtggcctcagttctggcttttattatcttcctcattgtgcgctaccgg
gtgtgtaaccaaggagatgcagataaggctctggagatgggggatattcggtcactgagc
agtgatggacagctacagggctgtggggtccccaagtccctctccaagcaagttctacgt
ccggaaaagaatgacaaggagtgcctcagagtttccctgcctccgccagagccagacaag
caacgaccgccagctgtagccactaccaaaccttctgtccctgactgcactgtctctacc
tccgctgccagccacagctggcacccggcctccccaggtgccccgaggcccaaacgttcc
agcgccccaccaaaaccctcagaggctcgccggtctgaagctcaggcagatgttgagctt
gagaacatgaaccgcaataactcatcggaggttaaaatggcaaccaccgtcgctttggct
attcccggccagcccaccaactggaccgccgtccccagggttccgcggccacaccagccc
ccccaacagcattacatgactgtacctgcaggggcagtgagggtgaaccgcaggcattcc
ctcaacacagactcgtacagggagcactgctatgtagcctaccccaaaaccggggccagc
ctgcgttccaaacgcagcctgtcgatgagcgtggagctgccgcagctcgagagcacaaca
aacattcacagggccagggacaagctctccaggtctgagtggcttctggagagcacttta
tga
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