Hippoglossus stenolepis (Pacific halibut): 118099231
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Entry
118099231 CDS
T08308
Name
(RefSeq) protein jagged-2 isoform X1
KO
K21635
jagged-2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118099231
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Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_2
DSL
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
118099231
NCBI-ProteinID:
XP_034999525
LinkDB
All DBs
Position
20:17518597..17557715
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AA seq
1252 aa
AA seq
DB search
MWNHRTRIRSRFPIVCLLLTLWTEVSQSTGYFELQLISVQNVNGELADGECCDGSRGSQD
LRCTRDECDTYFRVCLKEYQMEVTTGGPCTFGAGSTQVLGGNMFSFKSGKSNANRGDEPG
RILIPFQFAWPRTYTLIVEAWDWDNDTRSKEEELLIERSAHTGMVNPGDPWQTIPHAGAV
ARLTYRIRVRCDDNYYGNKCNKLCVPRDDYFGHYRCEPSGAQVCLDGWMGTDCCTAICKQ
GCHLLHGGCAVPGECSCNYGWQGQFCDECELYPGCVHGTCNLPWQCSCERNWGGLLCDKD
LNYCGRHHPCINGGTCLNTEPDVYHCSCPQGYSGQTCQIAEHACVSDPCANGGTCHEVAT
EFECQCLPGWEGPTCANNLDECASSPCAQGGTCIDGEDGFKCVCPPQWEGQTCQIDRNEC
AESPCKNAHACKNLIGGYLCNCFPGWSGQNCDIKVSGCHGRCQNGATCKGNHCQCPPGFA
GAHCEIQRNKCDSAPCQNDGQCHAVLDGFVCECPPEFAGQLCEIPSWSPSDACDPNPCEN
EAQCHSIYQDYYCACPEGYEGKTCERLKVNCKTVPCQAIDSCTVAVATNDSAGVRHISSN
VCGPRGRCLSQPGGNFTCVCDPGFSGMYCHENINDCIDSPCGNGGTCIDGVNSFQCFCPD
GWEGRLCDHNVNECRHNPCKNGGRCVDLVNDFYCECADNWKGKTCHSRESQCDATTCSNG
GTCYDHGDAFRCACPPGWGGNTCNTAKNSTCASSPCSNSGTCVGGGDTFTCICKDGWEGP
TCGQNTNDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRININECQSSPCAYGATCVD
EINGFRCICPLGRTGARCQEFIGIGKTCHYAGLQFPHGSRWEEECNNCHCINGKVDCTKV
LCGRRPCLLQPSGQQQSCPAGRECLKHSYLTCFSPPCHQWGVCAIAGPSPPQVTTKCQPN
SGHLDNSCVRITLVFNRDKAPPGTTVENICYELRYLSSLRSLAKDHALLLLCDVAQSNQD
AVKVAISFQPEDLQDLSMIQKVASAIEGTLSRRHNSSIMLAVTEVKVETQVMPPSVDYLV
PLLCVVFCLLCLFCIIVCVWWTRKRRKERERNTRSASDDNVNNQWEPLRIVVGRAQPQQQ
QLKESNREAEQERRKLMGPSYRTCDEGEEEEETEGELELEEECGGAEAGKQPVYKYSKAA
VQSSGGVLCTLHSSSSSLKAPHRTPGYSPKDNRWKNVSAVLTGQKGRRDHCV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaccaccgcaccaggattaggagccgcttcccgatagtgtgcctgctgctgacg
ctatggacggaggtgtcccagtccaccggctatttcgagctgcagctgatctccgtgcag
aacgtgaacggggagctggcggacggggagtgctgcgacggctcgcggggctcccaggac
ctgcgctgcacccgcgacgagtgcgacacgtacttccgagtgtgcctgaaggagtaccag
atggaggtcaccaccggcggcccctgcaccttcggagctggatctacgcaagttctcggt
ggaaatatgttttcttttaagagcgggaagagcaacgcgaacagaggcgacgagcccggc
aggattttgatccccttccagttcgcgtggccgcggacgtacacgttgattgtggaggcc
tgggactgggacaacgacacacgaagcaaggaagaggagctgctgatcgaacgcagtgcg
cacaccggcatggtgaaccccggtgacccctggcagaccatcccgcacgcaggggccgtg
gctcgcctcacgtatcgtatccgggtgcggtgtgacgacaactactacggcaacaagtgc
aacaagctgtgcgttcctcgcgacgactacttcgggcattatcgctgtgagccttcaggg
gctcaggtgtgtctggacggctggatgggaacagactgttgcacagcaatctgcaaacaa
ggatgccacctgttacatggcggctgcgctgtcccgggggaatgcagctgtaactacggc
tggcagggccaattctgtgatgaatgtgagctgtatcctggatgcgtccacgggacctgc
aacctgccctggcagtgcagctgtgagaggaactggggcggcctgctgtgtgacaaagat
ctgaattactgcggtcgccaccatccttgcatcaacggaggaacctgcctgaacaccgag
ccggacgtgtaccactgctcctgtccacagggctactccggccagacctgtcagatagcc
gaacacgcctgtgtctccgacccctgcgccaacggtggcacgtgccacgaggttgccacg
gagttcgagtgccagtgtctgccaggttgggagggtccgacctgcgccaacaatttggac
gagtgtgcgtccagcccttgtgctcaagggggaacctgcatcgatggggaggacggcttc
aagtgtgtgtgcccgccgcagtgggaaggacagacctgccagatcgataggaatgagtgc
gcagaaagtccctgcaagaacgctcacgcttgcaaaaatttgattggcggatatctctgc
aactgttttccgggatggtctggacaaaactgtgacatcaaagtcagcggttgccacggt
cggtgccagaatggagcgacgtgcaagggtaaccactgccagtgtcctccaggcttcgcg
ggcgctcactgtgaaatccagaggaacaaatgcgacagcgctccgtgccagaacgacggc
cagtgccacgcggtgttggacggcttcgtgtgcgaatgcccgcccgagtttgcaggacag
ctgtgtgagatccccagctggtccccctctgacgcctgtgatccgaacccttgtgagaac
gaggctcagtgtcacagcatctatcaggactactactgcgcgtgtccagagggctacgag
ggaaaaacctgcgagcggctcaaagtgaactgcaagaccgtcccgtgtcaagcgattgac
agctgcaccgttgccgtagcgaccaacgactcggccggagtgcggcacatctcctccaac
gtctgcggtccgcgaggccgatgcctcagccaaccagggggcaacttcacctgcgtctgc
gacccgggcttcagcggcatgtactgccacgagaacattaacgactgcatcgacagcccc
tgtggaaacggaggaacctgcatcgacggggtgaactccttccagtgcttctgtcctgac
ggctgggagggtcgactctgcgaccacaacgtcaacgagtgccgacacaacccctgcaag
aacggcggccgctgcgtcgacctggtgaacgacttctactgcgagtgtgccgacaactgg
aagggcaagacctgccattcccgcgagagccaatgcgacgccaccacctgcagtaatgga
ggcacctgctacgaccacggagatgccttccgctgcgcgtgtccacccgggtgggggggg
aacacctgcaacacagccaagaacagcacatgcgcctccagcccttgttccaacagtgga
acctgcgtgggaggaggagacaccttcacctgcatctgcaaggacggctgggaaggaccc
acctgtggccagaatacaaacgactgcaaccctcatccatgctacaatggcggtatctgc
gtagatggagtcaactggtttcggtgcgagtgcgctcctggtttcgccggacccgactgc
agaatcaacatcaacgagtgccagtcttcaccctgtgcctacggagccacgtgtgtggac
gagatcaacggcttccggtgcatctgtccgctcggcaggacaggagccagatgtcaagag
ttcattggtattgggaagacctgtcactacgccgggctgcagtttccacatggcagccgc
tgggaggaggagtgcaacaactgtcactgcatcaacggcaaagtggactgtacaaaggtg
ctgtgtggtcgtcgcccgtgcctgctccagccgtcgggtcagcagcagtcctgccctgct
ggacgggagtgtttaaagcacagctacctcacttgcttctcccccccttgccaccagtgg
ggggtttgcgccattgccggaccctcgcccccacaagtcaccaccaagtgccagccgaac
agcgggcatttggacaacagctgtgtccgcataacacttgttttcaacagagacaaagca
ccaccaggaacaactgtggagaatatctgctacgagctgaggtatctttcgagcctccga
agtttggcgaaggaccacgcgctcctcctgctctgtgacgtcgctcaatccaaccaggat
gctgtaaaggtggcgatatctttccagcctgaagatctacaggacctcagtatgatccag
aaggttgccagcgccatagaaggcaccttgtcgaggcgacacaacagcagtataatgctg
gctgtcactgaggtcaaagtggaaacgcaggtcatgcccccctcagtggactacctggtg
cctttactctgtgtcgtcttctgcctgctctgcctcttctgcatcatcgtatgcgtttgg
tggacacgcaagcggagaaaagaacgcgagaggaacacgcgatctgcttcagacgacaac
gtgaacaaccagtgggagccgctccggatagtcgtgggtcgtgctcagccgcagcagcag
cagctgaaggagagcaacagggaggctgagcaggagcgcagaaagctcatgggtccttcc
tatcggacgtgtgatgaaggggaggaggaggaggagacggagggcgagcttgagctcgag
gaggagtgtggtggagcggaggcggggaagcagccagtttataagtactctaaggctgca
gtgcagtccagtgggggagtgctctgtaccctgcacagctccagttcatccctcaaagcg
cctcaccggaccccaggctacagccccaaagacaaccgctggaaaaatgtcagtgccgtc
ttgactggtcagaaaggccgaagagaccactgtgtataa
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