Hippoglossus stenolepis (Pacific halibut): 118099302
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Entry
118099302 CDS
T08308
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X2
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118099302 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118099302 (capn3b)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
118099302 (capn3b)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C2: calpain family
118099302 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
118099302
NCBI-ProteinID:
XP_034999657
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All DBs
Position
20:15565434..15576145
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AA seq
772 aa
AA seq
DB search
MEDKTHEGKVPLVEDTQVKVLHETEASHGPDDKADYPPVGANSIYSAILSRNEAVKDAKR
LKTFLELRDKYLKKKVLFEDPLFPANDSSLFYSHKPSMKIEWKRPSEICDKPEFIVDGAN
RTDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVV
VDDRIPTCNNQLVFTKSFRKNEFWSALLEKAYAKLHSSYEALKGGNTLEAMEDFTGGLTE
FFELSAASKDLYNIMKKALERGSLMGCSIDVVSASEMETRTDHGLVKGHAYSIIGLEECD
EVAKDTKIRLIRLRNPWGWVLWKGPWSADSKEWSTISIADKENLKKQTVEASEFWMSFDD
FKRNFTKLEMCNLTPDALQGDERNSWTVSVNEGRWVRGSSAGGCRNFPDTFWTNPQYRLQ
LYEEDDDPEDGTVACTLVVALMQKGRRKQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKD
FFLYTASKAKCKTYINLREVTERFRLPPGEYAILPTTFEAHQEGEFLLRVFSEKQSTSEE
AENTIESGKIQQDKRKREKPIVFVSDRARANKEIEHDGIRGEKKKKPKRKLLEPEEETEE
EKQFRAIYQQISGEDMQICANELQTIMKNVLSKHGEIKTKEGFSLETCRSMIALMDTDGT
GKLNLQEFKHLWKKIKKWQLIFKRYDKDKTCSISSFEMRNTVNDAGFHLNKQLYDIIAMR
YADEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagacacatgaagggaaagttcctctggtggaagacacacaggtgaaggtg
cttcatgaaactgaggcgtcacacgggcctgatgacaaagccgattaccctcctgttggg
gcaaactccatctactctgccatcctgagcagaaatgaggccgtgaaggatgccaagcgt
ctcaagacattcttggagctgcgggacaaatacctgaagaagaaggtgttgtttgaggac
cccctgttccctgcaaacgactcctcgctcttctacagtcacaaaccttccatgaagata
gagtggaaacgtccctcggaaatttgtgacaagcctgagttcatcgtggacggagccaac
aggacggacatctgtcagggagaattgggtgactgctggctgctcgctgccatcgcctgc
ctgacgctgaacgagaagctgctgtacagagtgatccctccggaccagagcttcactgac
aactacgccggcatcttccacttccagttctggcgttatggcgaatggatcgacgtggtc
gtggacgaccgcatccccacctgcaacaaccagctggtgttcaccaaatccttcaggaag
aacgagttctggagcgcgctgttggaaaaggcctatgcaaagttgcacagctcttacgag
gcactaaagggggggaacacattggaagccatggaggatttcacaggtggccttaccgag
ttctttgagttgtccgcggcgtctaaagatctgtacaacatcatgaagaaggcgctggag
cgaggctcgctgatgggctgctccatagatgtcgtctcagccagtgaaatggagactcgg
actgatcacgggctggtcaaaggccacgcctactccatcatcggcctggaggagtgtgat
gaagtagcaaaggacaccaaaatacgcctgattcgcctgcgcaatccctggggctgggtg
ctgtggaagggaccgtggagtgcagattccaaagagtggtcgaccatttccatcgcggac
aaggagaacctaaagaaacagactgtggaagcgagtgagttctggatgtcttttgatgat
ttcaagaggaacttcacgaagctggagatgtgtaacctgacgcccgacgcgctgcagggg
gacgaaagaaacagctggactgtgtcggtcaatgagggccgctgggtgagaggcagctct
gctggcggctgcaggaacttcccagacacattttggacaaaccctcagtatcggctgcag
ctttatgaggaggacgacgacccagaggatggaacggtggcctgcactctcgtcgtggct
ctgatgcagaaaggtcgacggaagcagcgccatcaaggggccaaattcctcaccatcggg
ttttccatctacgaggtgccaaaggagatgtgtggacagaatcagcatctgcagaaggac
ttcttcctgtacacagcctccaaggccaaatgcaagacctacatcaacctgcgagaggta
acggagcgtttccgcctgccgccaggagagtacgccatcctccccacgacctttgaagcc
catcaagagggcgagttcctcctcagggtcttctccgagaagcagagcacgtccgaggag
gcggagaacaccatcgagtccggaaaaatccagcaagacaagagaaagagggaaaagcct
attgtatttgtgtcggacagagcgcgagccaacaaagagattgagcatgacggcattcgg
ggggaaaagaagaagaaaccaaagcgaaagcttttagaacctgaggaggagactgaagag
gaaaaacagttcagggccatttaccaacagatttctggtgaggacatgcagatctgtgcc
aacgaactccagaccatcatgaagaacgttctctccaaacatggtgaaatcaagaccaaa
gaaggtttcagcctcgagacgtgtcggagtatgatcgccttgatggataccgatgggacc
ggaaaactgaacctgcaggagttcaagcacttgtggaaaaagatcaagaagtggcagctg
atcttcaagcgttatgataaagacaaaacttgctccatcagtagttttgagatgaggaac
actgtgaatgacgcagggtttcacctcaacaagcagctttatgacatcatagcgatgcgt
tacgccgatgaacacctcaacatcgactttgacagttacatctgctgctttgtgaggcta
gagggaatgttcagagcttttaatgcctttgacaaagacggagatggaataattaaactc
aacgtcctggagtggctccagctcaccatgtattcttaa
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