Hippoglossus stenolepis (Pacific halibut): 118099417
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Entry
118099417 CDS
T08308
Name
(RefSeq) serine-aspartate repeat-containing protein I isoform X1
KO
K23449
triadin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04020
Calcium signaling pathway
hsp04260
Cardiac muscle contraction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118099417
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118099417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp-B-Hydro_N
Motif
Other DBs
NCBI-GeneID:
118099417
NCBI-ProteinID:
XP_034999912
LinkDB
All DBs
Position
20:19321102..19337577
Genome browser
AA seq
1436 aa
AA seq
DB search
MTEAVEARSSTTTTMVIDSKSGDAGSSLRTPKKTFTEDVSSTFSSPLAWILVLALVITWS
CVFVIMFDLIDYKTLSGRPPPGVRKVFKDSGRRGGLTKISSDPMKVVNDAVEESTNAISL
MFKFAASLIAPEEDDGNLYAVRKKGEFLPSRSKVVGMQAKTKPPVVDAVEEEEEGDEEEA
AEEEEEKEEEDEGDAEEGEQLEEYEEEYEDYDEDEEYEDEEEYDEEEEEYEEEDYEEEEE
EYEEEEAEEEEGVEVEEAGGVEDDEEEGADAVGEVEEEEEEEEEEEEEEDEEEGAEAVEE
VEEEEEEEEEDEEEGAEAVEEVEEEEEEEEEDIEEGAEAVEGDEEEEDEGQEVEDKVGEE
EEEEEEEEEGPAEEEQEEEKKDEAAVDEEEDVAEEEENGVAAEVEQDDEDDDEDEKGPEA
AVADTDEGESKEEAVEEEEEKDDEDDEVEEEKTDASVEDDDEDDEEESAAADAEDDDDEV
SPEPSSTSENEESAVSPDSESDAPVDVKDSDEDVTLPVDDDEDHEDKHEGHEDDEEDEDD
EDDEDDAFIDSSDLSESALLSSDEEAEEDGDDDDDEDDKLAEGVLTSDSEEDYLKLDLPP
VATVSEDDEDDEIEDHKLSELEDLLLLAALEDDDEDLKDTDDDEDDDEDLEDVSVASSEH
FADDEDDDEDSDLRDDDLDIDFDKDVHVELDAEDDDDDDHHKTDDDEEDDDKDEEEVEVA
PFESTDSGVLGDDDADDALETDEESVGETVFSDDITYDTSDEDDEDDKDDDEDIDSSSFE
FSLDQEEIKETFVYTEKDEDEIISEFLADEDEDVDDGDDEDEEDEEDEEDDDVLLTAPTA
AASSVQEEAVKTEVDEEEEQLRQAGDEDEAEEDDTEETASVTSQPAAPVEEDEGEDEEPT
AETQKSVDEPEDEKEEYDEDDDEERAAVDVIRPLPEPEEEATKSEVPDCPCLHSAKTSTK
TAEKKVLFSEAPRRVSATRRKKVSDREAVKTDDKPKRKALPRIVSLEPKIRKIRRIPALP
RVKKVEKTKTSKPETVTKKQEDVPESGQEVGPCRPAPVYCPSPPGWYVHHIVTDNPYPPP
TMAAPSAPVLTVHPGAPPMQPLYHQPPPPPLMQYQPYVPPLQPVTQPPPEAAQPAEAAPP
EAPEQEAPVQPEVKAPAAEAPPAAIRLHEPVTEEEEVKAASPKKAAKKKTTKAADSEKEP
PAAKQKPKKEAVVSKDKTKAAPAKKDSAAKEEKTKSPAAAKKEKTVKEKTRTAAAAKKEP
AAVHQKRKSSSEKTASPVKSKAKTAPAKKDPEPRPHPIRLRTRLDAGKRANVTSPAKDEK
PSRPSSSEPAKMKSETSAERKGKAEKAEKKSVKEAQDKEKQPSEAKEPQTEDNTTEQKKP
GQRYFQCIYVPGKNAQYPLRPFTPAMSPAMMSPAMMSPALRSMLEQQQRAARASGQ
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcagttgaagcgcggtcgtccaccaccaccaccatggtcatcgacagtaag
agcggcgacgccggctcgtctctacggacgccaaagaaaacgttcacagaggacgtgtcc
tccacgttcagctccccgctggcctggatcttagtcctggccctcgtcatcacgtggtcc
tgtgtcttcgtcatcatgttcgatctgattgactacaagactctctcaggtcgcccgcct
cctggcgtcaggaaggtttttaaggattcagggcgtagaggaggcctcaccaagatcagc
tccgaccccatgaaggtggtgaacgatgcggtggaggaatcgacaaacgcgatcagcttg
atgttcaaattcgccgccagcctgatcgccccagaggaagatgacggaaatctatacgcc
gtgagaaaaaaaggagaatttttgccgtctcggagtaaagttgtagggatgcaagcaaag
acaaaaccaccagtagttgacgctgtggaggaagaggaggagggagatgaagaggaggct
gctgaggaggaggaggagaaggaggaggaggatgaaggagatgcagaagagggggaacaa
ctagaggagtatgaagaggagtatgaagattatgatgaggatgaggaatatgaggacgag
gaagagtatgacgaggaggaggaagaatatgaggaggaggactatgaggaggaggaggaa
gaatacgaggaggaggaagctgaagaggaggaaggagttgaagtggaggaggcaggggga
gttgaagacgatgaagaagagggagcagacgctgttggggaggtggaggaagaggaggag
gaggaagaagaagaggaggaagaagaagatgaagaggagggagcagaagcggtggaggag
gtggaggaagaggaggaggaggaagaagaagatgaagaggagggagcagaagcggtggag
gaggtggaggaagaggaggaggaggaagaagaagacatagaggagggagcagaagcagtg
gagggagatgaggaagaggaagatgagggacaagaagtggaggacaaggtgggggaggag
gaagaggaggaggaggaggaggaagaaggacctgcagaggaagaacaagaggaggagaag
aaagatgaagcagctgtggatgaagaggaggatgtggccgaggaagaggagaatggggta
gctgctgaggtggagcaagatgatgaagatgatgatgaggatgagaagggacctgaagca
gctgtggcagacaccgatgaaggtgaatccaaagaagaggctgtagaagaagaggaagag
aaagacgatgaagatgatgaggtagaggaagagaagacagatgcttctgttgaagatgat
gatgaagatgatgaagaggagtctgcagctgctgatgctgaggatgacgatgatgaagtt
tctcctgaacctagttccacttctgagaatgaagagtcggccgtgtctcccgactcggag
tctgacgcacctgttgatgtcaaagacagcgatgaagatgtgactctgcctgttgacgat
gatgaagaccatgaagataaacatgaaggccacgaagatgatgaagaagacgaagatgat
gaagacgacgaagatgatgccttcatcgacagctcagacctcagtgaatctgcacttctc
tcgagtgatgaggaggcagaggaggatggcgacgacgatgatgatgaagatgacaaacta
gctgagggtgttctaacatctgacagcgaggaagactacctgaagcttgatcttcctccg
gtcgccacagttagtgaggatgatgaagatgatgaaattgaggatcataaactctccgaa
ctcgaggatcttcttcttctggccgctcttgaagatgatgatgaagacctgaaggacact
gatgatgacgaggatgatgatgaagatctggaggacgtctctgttgcctcctctgagcac
tttgcagatgatgaagatgacgatgaagacagtgacctcagagacgatgatcttgacatc
gactttgacaaagacgtccacgttgagctggacgctgaagacgatgatgatgatgatcat
cacaaaaccgatgatgatgaagaggatgatgataaagatgaggaggaagttgaagtcgct
ccctttgagagcacagacagtggagtcctaggtgatgatgatgctgatgatgctctggaa
acagatgaagagtctgtcggagagactgtcttcagtgatgacatcacctatgacacaagt
gatgaagacgacgaggacgataaagacgatgatgaagatattgattccagctcgtttgag
ttcagcctcgatcaagaagaaattaaagaaacattcgtttacactgaaaaagatgaagac
gagatcatatcagagtttttagctgatgaggacgaggacgtcgatgatggtgatgatgaa
gatgaggaagatgaggaagatgaggaagatgacgacgtcctgctcacagcccccactgca
gcggcgtcctctgtccaggaggaggcagtaaagactgaggtggatgaggaagaggagcag
ctccgtcaggctggtgatgaagatgaagctgaggaggacgacacagaggaaactgcctca
gtcaccagtcagcctgctgctcctgtcgaggaagacgagggagaagacgaagagccgacg
gctgaaacgcagaaatctgtggatgagcctgaagatgagaaagaggagtacgatgaagat
gacgatgaggagcgggcggcggtggatgtgatcagacctttgcctgaaccggaggaggag
gcgacgaagagtgaagtcccagattgtccatgtttacattctgctaaaaccagcaccaag
acggcagagaaaaaagttttattttcagaggctccaaggagggtttcagcaacgaggagg
aaaaaagtttcagaccgtgaagctgtgaaaacagacgacaaaccaaaaaggaaagctctt
cccagaattgtgagtctggagccgaagatcaggaagatcaggaggatcccggctcttccc
agagtcaagaaagtagagaagacaaaaacttccaaaccagagacagtgaccaaaaaacaa
gaggacgtcccggaatctggacaagaagtcggcccctgcagacctgcacccgtctactgc
ccgtccccacccggctggtacgttcatcacatcgtcacagacaacccgtacccccccccc
accatggcagctccgtctgctcctgtcctcaccgtccatcccggagcgccgcccatgcag
ccgctctaccatcaaccaccaccccccccactgatgcagtatcaaccgtatgtgccgccg
ctgcagccggtgacgcagccgccgccagaagcagctcagccggctgaagctgcgccgcca
gaggccccagagcaggaggccccggttcagccggaggtcaaggctccagctgccgaagct
ccgccggcggccattcggctccacgaaccagtgactgaggaggaagaggtgaaggctgcc
tcccccaagaaagctgctaagaagaaaaccactaaggcggctgattcagaaaaagagccg
ccagcagccaaacagaaaccaaagaaagaagctgttgtttctaaagacaaaaccaaagca
gcccctgcaaagaaagactcagcagcaaaagaagagaaaaccaaaagtcctgcagcagct
aaaaaagagaaaactgtgaaagaaaaaaccagaaccgctgcagctgcaaagaaagagcct
gcagctgttcatcagaagaggaaatcctcctctgaaaagacggcgtctcctgtcaagagc
aaagccaagacggctcctgccaagaaagatccggagccgcgtccacatccgatcagactg
agaacgagactcgacgccggcaagagggcgaacgtgacgtctccggccaaagacgagaaa
ccgtccagaccttcttcctctgaaccagccaagatgaagtcagaaacctcggcagagagg
aaaggcaaagctgaaaaggctgagaagaaatctgtcaaagaggctcaagataaagagaaa
cagccatcagaagccaaagagccgcagactgaagacaacaccacagaacagaagaaacca
ggccagcgatacttccagtgcatttacgtccctggtaaaaatgctcagtaccccttacga
cctttcaccccagcgatgtcccccgccatgatgtcccccgccatgatgtcccctgcactc
cgctccatgttggagcagcagcagcgagcagccagggcgtcggggcagtaa
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