Hippoglossus stenolepis (Pacific halibut): 118099520
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Entry
118099520 CDS
T08308
Name
(RefSeq) CSC1-like protein 1
KO
K21989
calcium permeable stress-gated cation channel
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118099520
Transporters [BR:
hsp02000
]
Other transporters
Pores ion channels [TC:
1
]
118099520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
DUF2316
FA_desaturase
Motif
Other DBs
NCBI-GeneID:
118099520
NCBI-ProteinID:
XP_047194144
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All DBs
Position
20:complement(9886505..9894275)
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AA seq
697 aa
AA seq
DB search
MVAANKRVMEEGQANENTPNEPTEAEQGFFSWIPFTINLSDEQIKAKSGQDAVHYLSLQR
HLIFLLSIKSVISLSIIMPINWSGFLLSQELLLWVHPVFAVVYLILTVFVLINHTRQVKD
RSKETTRNTLMYCSVPKTATEEEIKAHFTEAYPTCEVTAVTLGYDVTNILNLDQERIESG
ENLRYYEHVLEKTGKSKKINPCVCSHLCCCCNFQEVDAIEFYANKEQDLLQKMRNQLEKE
QPRPLGMAFVTFKTNAMAKLVLKDFNAVKCHKFCCGRKPKSSSKSESLKVTNWRAEFASF
ARSIKWENLAVKGFKWTGQFLVVNLALLILVTFLTTPAMMVNTLDRFNVTTPITDLMIPI
VSQFFPTLLLLVCSSLLPAIVHHSTDLESRWSSSSEQLSTMRKLYFFLIFMVLILPSLGL
TSIAGLFQWLFQRLIHGVGTVRFACVFLPDHGVFVVNYVITAGFMGSVMILLRLPELLLY
IIRLVFARSAAERKYIKQNQAYESAYGAMYGWTLCVFTICVAYSIICPIITPCGLLFVMI
RHFVDKHNLYFAYLPNPLDSHVHMAAIDMVMVAPILCLMWLYFYFFDTAGFLSPIAMFTM
VFLLIVVVVCITHKFFGYFKYLSPQNYKVKDKEEVAEEEQEVYLPRVLYPEAPVCAMILE
TNEAADNSLAIRTSPLWDVRFTDSVHFTDTDKLISET
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagccaacaaacgggtcatggaggaaggacaagccaatgaaaacacgccaaat
gagcctactgaggctgaacagggattcttctcttggattcctttcaccatcaatttgagt
gatgaacaaataaaagctaaaagtggccaggacgctgttcactacttatcccttcagcgt
catctgatcttcttgctgtcgatcaagagtgtcatctccctgtcaatcataatgcctatc
aactggagtggattcttactaagtcaagaactcctgttatgggtgcacccagtgtttgca
gttgtctatttgatcctgacagtttttgttctgataaatcacacacgtcaagtaaaagac
agaagcaaagagacgaccagaaacaccttgatgtattgttcggttcctaaaacagcgaca
gaagaagaaataaaggcccatttcacagaggcgtacccgacctgcgaagttaccgctgta
accttgggctatgacgtgaccaatattttgaatcttgatcaggaaaggattgaatcagga
gaaaacctacgctactacgagcatgtcctagagaaaacaggaaaatcgaagaagatcaac
ccttgtgtgtgtagccacctctgttgctgttgcaactttcaggaggttgatgccatcgag
ttctatgcaaataaagaacaagacctgctacaaaagatgaggaatcagctggaaaaggaa
caaccacgccccctggggatggcctttgtgacctttaagaccaatgccatggccaagtta
gttctgaaagacttcaacgctgtcaagtgtcataaattctgctgcggaaggaagcccaag
tcttcatccaaaagcgaaagtctgaaagtgacgaattggagagccgaatttgcatctttt
gccagatctatcaagtgggagaatctggcagtgaagggtttcaaatggacgggtcaattt
ctcgtagtcaatttggccctcttgatcctggtcacattcctcacgactcccgccatgatg
gtgaacaccttggacaggttcaatgtgacaacacccatcaccgatctcatgattcccatt
gtcagtcagttcttccccactctactgctgttggtgtgttcctcattgcttcctgccata
gttcaccattctacagatttggaatcacgctggagcagttccagtgagcagctgagcacg
atgcggaaactctactttttcctgatcttcatggtgctcatcctcccctcactaggactc
accagtatcgcaggcttattccaatggttgtttcaacgcttgatccacggcgtagggaca
gtgaggtttgcgtgtgtgtttctgcctgaccacggagtgtttgttgtcaactatgtgatc
acagcgggtttcatgggatctgtgatgattttgctgcggttgccagagttactgctttat
atcattcgtttggtatttgcacgctctgcggctgaaaggaaatacatcaaacagaaccag
gcctacgaatctgcatatggggccatgtatggctggaccctctgcgtgttcaccatttgt
gtggcttacagcatcatttgtcccatcattacgccttgtggtctactattcgtgatgata
aggcactttgtggacaaacacaacctgtactttgcctaccttcccaacccccttgatagc
catgtccacatggcagctatcgatatggtcatggtggcacccatcctctgcctgatgtgg
ctttacttctactttttcgacacagcaggtttcttgagccccatagctatgttcaccatg
gtgtttctattgatcgttgtcgtcgtctgcatcacacacaagttctttggctatttcaaa
tacctcagcccacaaaactataaggtgaaggacaaggaagaggtagctgaggaagaacaa
gaggtctaccttcccagagtgctttatcctgaagcacctgtctgtgccatgattctggag
actaatgaagctgcagacaacagcctggccatcagaaccagtccattgtgggatgtccgg
ttcactgattcagtgcatttcactgatacagacaaattaatctcagagacatga
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