Hippoglossus stenolepis (Pacific halibut): 118099626
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Entry
118099626 CDS
T08308
Name
(RefSeq) neurexin-3b isoform X1
KO
K07377
neurexin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118099626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118099626
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
118099626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
118099626
NCBI-ProteinID:
XP_035000203
LinkDB
All DBs
Position
20:complement(5899440..6180167)
Genome browser
AA seq
1716 aa
AA seq
DB search
MNPNSLPGHVLLLLSTVLGLSVGLQFTGSEGQWARYLRWDASSRSDLTFQFKTPEPEGLL
LYFDDGGFCDFLLLAVSEGKMQLRVSIDCAETTITSDKMVNDSRWHFAAINRHNLRTGLA
VDGQTKTEEVRPQRQFMKIISDLFLGGLPGDIRTSAITLPSVRELPPFKGIITDLSYGSK
LPTLINSQKVRLEMMGLCTENPCENDGICLLADGEPYCDCSKTGYVGRYCTEAVQRKPGL
AHLKAEQGRSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGK
SADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDIKVTRNLRQQSGIGHAM
VNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLR
EVVYKNNDIRLELSRLARIVDPKMKLQGDIAFKCENVPTLDPINFETPDSYLALPKWNTK
RVGSISFDFRTSEPNGLILFTHGKAQDRRDAKGQKNNKVDFFAVELLDGGLYLLLDMGSG
TIKVKATQAKVNDGAWHHVDIQRDGRSGIISVNSRRTPFTASGENEILDLEGDLYLGGLP
DNRAGLVLPTELWTAMLNYGYVGCVRDLFIDGRSKDIRQIAQSQNMTGIKSSCNKVTGKQ
CDSNPCKNNGACKEGWNRFVCDCTGTGFWDSTCERESSTLSYDGSMYMKVVMPNVMHTEA
EDVSLRFMSQRAFGLLMAATSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVLY
AGQKLNDNDWHAVRVVRRGKNFKLTVDDDMAEGQMVGDHTRLEFNNVETGILTERRFVSS
APSSFIGHLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKGSYLGLAT
LQAYNTMHLFFQFKTTSPDGFIVFNSGDGSDFIAVELVKGFIHYVFNLGNGPSLLKGNSD
NPLNDNQWHNVVITRDVANTHTLKVDSKSVTQNVDGAKNLDLKGDLFIGGLGPNMYQNLP
KLVVSREGFQGCLASVDLNGRLPDLINDALFRSGQIERGCEVGFTKADLQGPSTTCQEDS
CANMGVCIQQWENFTCDCSMTSYTGTNCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDR
LAVGFSSTIKDGILVRIDSAPRLGDYIMLHIEQGKVSVTFNIGTVDISVKETTTAVNDGK
YHLVRFTRNGGNATLQVDNWPINEHFPSGNSDIERYQMANKKIPFKYTRPVEDWLQEKGR
QLTIFNTQATISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHANIKVNGSVRLVGDVP
TSRGAARTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDL
EECDSGHAGGELVIPVLVEDPIDIPSVSTRSPFIPLPPTLRPVLTIIETTKESLAMATEA
GVPCLSDRGSDDCDDGDDGDDDDDDDDDGMVISGFGSGEAFDSSLPPTDDEDFYTTFSLV
TDKILTTSAYEGGYKALAPKWEAKDLRPSKASEAGRTIPTSPLPDLRGTPPAAVPSDTPP
KLPAGKMNNREVKPPQPDIVLLPLPTSFDGDGTKPRGPFITSPMLRTVPAALPTVPGVVR
RVPPGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISN
SAQTNGAVVKDKTPSASAKGSAGSKRPKDKDKEYYV
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaacagcctacctgggcatgtcctcctgctgctaagtactgtgctgggcttg
agtgtaggcttacagtttactggctctgagggccagtgggctcgctacctgcgctgggac
gccagctccagaagtgacctgacatttcagttcaagacaccagaaccagaaggcctgctg
ctctacttcgacgacggcggattttgcgatttcctgctcctggcggtgtctgagggtaag
atgcagcttcgcgtcagcatcgactgcgccgagaccaccatcacctccgataaaatggtc
aacgacagccgctggcactttgcagccatcaacaggcacaatttgcggactggcttggcc
gtggacggccagaccaagacggaggaggtgcggccccagcgtcagtttatgaagatcatc
agcgacctcttccttggagggctcccgggggacatccgcacgtctgccatcaccctgccc
tctgtccgtgagctaccaccgttcaagggaattattacagacctcagttatgggagtaag
ctgccgacactcatcaatagtcagaaggtacgcttggagatgatgggcctctgcacggag
aacccctgtgagaatgacgggatctgcttgctggcagatggagaaccctactgtgactgc
tccaaaactggatatgtaggtcgatactgcactgaagcagtccagagaaaaccaggcctc
gcacacctgaaggcagagcaaggtagaagcaaagcgagggaggagaacgtggccaccttc
cgcggctcggagtacttttgctacgacctgtcgcagaaccccatccagagcagcagcgac
gagatcacactgtccttcaaaacctggcaacgcaacggcctcctcctacacacggggaag
tccgccgactatgtcaacctggcgctcaaagacggggccgtgtcgctcgtcatcaatctg
ggctccggggccttcgaggccattgtcgagccagtcaatggaaaattcaatgacaacgcc
tggcacgacatcaaagtgacacgcaacctgagacagcaatcaggcattggacacgctatg
gtaaacaaactacattgtctggtgactatctctgtggatggaatcctcaccaccactggc
tacacccaggaggactacaccatgctgggctccgatgatttcttctacgtgggcgggagc
cccagcaccgcggacctgcccggatctccagttagcaacaatttcatgggctgcctcaga
gaggtggtgtacaagaacaacgatatccgcttggaactgtcccgcctcgctcgcatcgtt
gaccccaagatgaagcttcaaggtgacattgcattcaagtgcgaaaacgtccccacccta
gatcccatcaacttcgagacccccgactcctacctggccttgccgaagtggaacaccaaa
cgcgtgggctccatctcttttgactttcgcacgtctgagcccaacgggctgatactcttc
acccacggtaaggcgcaggaccgacgggacgctaagggccagaagaacaacaaggtggac
ttcttcgccgtggagctgctggacggagggctgtacctcctgctggatatgggctccggg
accatcaaggtcaaggccacacaggctaaggtcaatgacggggcctggcatcatgtggac
atccagagagatggtcgctcaggcatcatctcagtaaacagccgccggacccctttcaca
gccagcggggaaaacgagatcttggacctggagggggacctttatctgggcggtctccct
gacaaccgggccggcttggtgctccccaccgagctctggaccgccatgctcaactacggc
tatgtgggctgcgtgcgggatctgttcatcgacggacgcagcaaggacatccggcagata
gcccagtcccagaatatgaccggcatcaaatcctcctgcaacaaagtgacggggaaacag
tgcgacagcaacccgtgcaagaacaacggggcgtgtaaggaagggtggaaccgcttcgtc
tgtgactgcaccgggaccggcttctgggatagtacctgcgagagagaatcttcgaccctg
tcttacgacggcagcatgtacatgaaggtggtgatgccgaacgtcatgcacaccgaggcc
gaggacgtctccctgcgtttcatgtcccagcgggcgtttggcctgctcatggccgccacc
tcccgcgagtcggctgacacgctgaggctcgagctggacagcgggagggtgaaactgact
gtcaacctagactgtgtcaggataaactgtaacaccagcaaaggccctgaggttctttat
gccggacaaaagctcaacgacaatgattggcacgcggtacgagttgtccgccgcggtaaa
aacttcaaactcactgtggatgacgacatggccgaaggccagatggtgggcgaccacacc
cgtctggagttcaacaacgtggagacgggcatcttgactgagaggcgcttcgtttcgtcc
gctccctcctccttcatagggcatcttcagagcctgaagtttaacggcatgcagtacatc
gacatgtgcaagaacggggacatcgacttctgcgagctcaacgcccgtttcggcatgcgc
ttcatcatcgccgaccccgtgaccttcaagaccaagggcagctacctgggcttggccacg
ctgcaggcctacaacacaatgcacctcttctttcagttcaaaaccacgtcacctgacggt
ttcatcgtcttcaacagcggagacgggagcgacttcatcgccgtggagttggtcaaaggg
ttcatccactacgtgttcaacctggggaatgggccgagtctgttgaaggggaacagtgac
aacccgctgaacgacaaccagtggcacaacgttgtcatcacacgcgacgtcgccaacacg
cacacactgaaggtggactcaaagtcagttacccagaatgtcgacggagcaaagaacctc
gacctcaaaggtgacctgttcatcgggggtctcggacccaacatgtaccagaacctcccg
aagctggtggtttcccgtgagggcttccagggctgcttggcctcagtggacctgaacggc
cgcctgccagacctcatcaatgacgcccttttccgcagcgggcagattgagcgtggctgc
gaagttggtttcaccaaagccgacctgcaaggcccaagtacgacttgccaggaggactcg
tgtgccaacatgggtgtgtgcatccagcagtgggagaacttcacctgtgactgctccatg
acgtcttacacggggactaactgcaacgaccctggcaccacctacatcttcggtaaagga
gggggtctgatcacgtacacgtggcccaacaacgagaggccgagcacgcggacggaccgg
ctggcggtgggcttcagctccaccatcaaagacgggatcctcgtgcgcatcgacagcgcc
ccgcgtctgggagactacatcatgctccacatcgaacaaggcaaagtaagtgtgactttc
aacatcgggacggtggacatcagtgttaaggagacaactacggcggtaaatgatggcaaa
taccacttggtgcgattcaccaggaatgggggcaatgccaccttgcaggtggataactgg
cccatcaatgagcactttccctcaggcaacagcgacattgagcgctatcaaatggcaaat
aagaaaatcccgttcaaatatacccggccagtagaagattggcttcaggagaaaggccgg
cagctgacaatcttcaacactcaggccactatctccatcggcggaaacgaccgcaagcgg
ccctaccagggccagctctctggcctctactacaatggccttaaagtcctcaacatggcc
gcagagggccacgccaacatcaaggtgaacggcagtgtgcggctggtgggcgacgtgccg
acgagccggggcgcggcgcgcaccaccacctcggtgccgccggagatgtccaccaccttc
atcgagaccaccaccaccttgtccaccacgaccacgagaaaacagcgttcaccacccacc
attcagacgacagatgacattgtttcgtcagcggagtgctccagcgacgacgaggacctg
gaggagtgtgactccggacatgcaggaggggagctagtcatccccgtgctagtcgaggac
cccatagacatcccttctgtatccacccgttctcctttcatcccccttcccccaaccctc
cgccccgtcctcaccattattgagaccaccaaagaatccttggccatggccactgaggcg
ggggtaccttgcttgtcggaccgaggcagcgatgattgtgatgatggtgatgatggtgat
gatgatgatgatgatgatgatgatggaatggtgatttcggggtttggctctggcgaagct
ttcgactctagcctgcccccgactgacgatgaagatttttacaccaccttctccctggta
acagataagatcttgaccacatcggcctatgaaggtggctacaaagccctcgcacccaag
tgggaggccaaggacttgaggcctagcaaagcctctgaggcaggtaggactatacccacc
tcgcctctacccgacctccggggcacaccaccggcggcggtcccctcggacacgccaccc
aagctgcctgctgggaaaatgaacaaccgtgaggtaaaacccccgcagccggacatagtc
ctgctgcccctgcccacatcctttgatggggacggcaccaagccacgggggcccttcatc
acctcgcccatgctgcgcacagtgcccgcagccttgcccacagtgcccggcgtggtgcgg
cgggtgcccccgggggcatccgaggtgatccgagaatccagcagtaccacaggcatggtg
gtgggcattgtctcagccgctgccctctgcatcctcatcctcctctacgccatgtacaag
tacaggaacagggacgagggttcctaccaggtggacgagacgcgcaactacatcagcaac
tcggcgcaaaccaatggcgctgtggtgaaggataaaacacccagcgccagcgccaaaggc
agcgccggtagcaagagaccgaaagacaaggacaaggaatattatgtatag
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integrated database retrieval system
