Hippoglossus stenolepis (Pacific halibut): 118099634
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Entry
118099634 CDS
T08308
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118099634 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118099634 (lft1)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Transforming growth factors (RSTK binding)
118099634 (lft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF5422
Motif
Other DBs
NCBI-GeneID:
118099634
NCBI-ProteinID:
XP_035000225
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All DBs
Position
20:complement(4629378..4631382)
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AA seq
358 aa
AA seq
DB search
MDFLRACVLCTAILGITKAFTHQDMKDALLKKLGMEEIPKIHKRDLENLVIPAHIKNKYM
SMLKMHHSRRRRSLPSLAGILRGIPGNLDISGEYLYSDTTRYRMVFDMEARIPDNSEVTM
AELKLYQRANFHKRFTVERKNHRAVSNARVSIYWVEVLSNGSNRTSLVDSRLIPIHESGW
KSFDVTQAVHYWSKTQQKTPMHLEVWIEGERPGSYAAEMAKSVHFTTQEQTDNTLGKPEL
ILYTLNLEEYGSRGDCDVSQSKDTCCREQHFVNFRALTWTQYWIIEPAGYQAFSCTGGCK
QPKRNYGYGERRCTVSESAPLPIMYLVKKGDYTEIEVAEFPNMIVERCACTMDNVSIV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctccgcgcttgtgtcctgtgcaccgctatcctcggaatcaccaaggctttt
acgcatcaggatatgaaggacgcgctgctgaagaaactgggcatggaggagattcctaaa
atccataagagggatttggagaacttggttattccggcgcatattaaaaacaagtacatg
tccatgctgaagatgcaccacagcaggaggcgcagatctctgcccagcctggcgggcatc
ctgagggggatccccggcaatctagatatttctggggagtatttgtactctgacaccact
cggtatcgcatggtgttcgacatggaggcgaggatccccgataacagcgaggtgaccatg
gcggagctgaagctctaccagcgggccaacttccacaagcgcttcacggtggagaggaag
aaccaccgggccgtgagcaacgcccgggtcagcatctactgggtggaggtgctgtccaac
ggatccaaccggacgtcgctggtagattcaagactgatccccattcacgagtcgggctgg
aagagctttgatgtgacccaggcggtgcactattggtccaagacacagcagaagacacct
atgcacctggaggtgtggatcgagggcgagagacctggcagctacgcggcagagatggcc
aagagtgtccactttaccacccaggagcagacggacaacaccttggggaagcccgagctc
atcctctacacactcaacctcgaagaatacggttctcgcggcgactgcgacgtcagccag
agcaaagacacctgctgcagagagcagcactttgtcaacttccgcgcgctcacctggaca
cagtactggatcatcgagccagcgggctaccaggccttcagctgcaccgggggctgcaag
cagcctaagcgcaactacggctacggcgagcggaggtgcacggtgtccgagagcgccccc
ctgcccatcatgtacctggtgaagaaaggggactacactgagatagaagttgcagagttt
ccaaatatgatcgtggaaaggtgtgcgtgcacaatggacaacgtgtccatagtatga
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