Hippoglossus stenolepis (Pacific halibut): 118099644
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Entry
118099644 CDS
T08308
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118099644 (hmbox1b)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118099644 (hmbox1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_31
HTH_37
NOC3p
Motif
Other DBs
NCBI-GeneID:
118099644
NCBI-ProteinID:
XP_035000235
LinkDB
All DBs
Position
20:4232232..4254791
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AA seq
519 aa
AA seq
DB search
MVGRFEPSSRMSEFSEEPRFTIEQIDLLQRLRRSGMSKQEILHALDTLDRLDREHGDKFG
RRTSSSSSSSSSYGVGGASSCNNNSASNTTTTFNNNNTASATTTSPVTCNGNSSAINNVE
RSASNHSAAAASSTTSKISTATQTQFGSTGGLSLSPSNSYDTSPPPGPPPPSAILPSPVS
LVALSQNGRDSLAATPNGKLSPPRYPVNSAAAARAFGFEATEEDLDIDDKVEELMRRDSS
MVKEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTT
PGATLNMRPAPLALEEMEWRQTPPPLTTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQY
PDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESH
GIDVQSPGGHSNSDDIDGNDFTEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSAAHSE
HQDPISLAVEMAAVNHTILALSRTGGVPSDIKTESLEDE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggtcggacgatttgaaccgagcagcaggatgtctgagtttagcgaggagccgcgcttc
actattgagcagatagatctgctgcagcggctgcggcgctccggcatgagcaagcaggag
atcctgcatgcgctcgacactctggaccggctggaccgggagcatggcgacaagtttggt
cgccgcacctcttcttcctcatcttcctcatcctcctacggagtaggcggggcaagcagc
tgcaacaacaattctgcctcgaatacaactaccacattcaacaataacaacactgcctcg
gcaacaaccacctctcccgtgacatgcaacggcaacagcagcgccatcaacaacgtcgaa
agaagcgctagcaatcactctgcggccgccgcctcttctacaacctccaaaatctccacc
gccacacagacgcagttcggcagcaccgggggactctcgctgtcccctagcaacagttac
gacacctccccgcctccagggccgccaccgccctctgcaatcctgccatcaccagtcagc
ttggtggcgctgtcacagaacgggcgtgatagcttagctgctacacccaacgggaagctg
tctcctccacggtatccagtgaacagcgcggccgcagcgagggcttttgggttcgaagcc
acagaggaagacctggacattgacgacaaggtggaggaactgatgaggagggacagcagt
atggtgaaggaggagatcaaagcgttcctggggaacaggaggatctctcaggcagtcgtg
gcacaagttaccggcatcagccagagcaggatctcccattggctgctgcagcatggctct
gacctaagcgagcagaagaagagggccttctaccgctggtacacgctggagaaaaccaca
ccaggtgccaccctcaacatgcggccggctccgttagctctggaggagatggagtggagg
caaaccccgccccccctcaccactgcccccggcaccttccggctgcgtcggggaagtcgc
ttcacttggaggaaagagtgcctggctgtgatggagagctacttcaacgacaaccagtac
ccagacgaggccaaacgggaggagattgcaaacgcctgcaacgctgtgattcagaaacca
gggaagaagctgtccgatctggagcgggtcacctcgctgaaagtttacaactggttcgcc
aaccgtcgcaaagagatcaagagacgggccaacattgaagccacaatcctggagagtcat
ggtatagacgtgcagagtcctggaggacactccaacagcgacgacatcgatgggaatgac
ttcacagagcaggcctgtgaccttccctatttcgacaagagacctctcagccgaccgttt
ggcctttaccgactggagcccacctcaccaacacaggatgacagcgcagcacacagcgag
caccaggaccccatctctctcgctgtagagatggccgccgtcaaccacaccatcctggcc
ctgtccagaaccggaggggtccccagcgacatcaagacggagtccctggaggacgaatga
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