Hippoglossus stenolepis (Pacific halibut): 118099682
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Entry
118099682 CDS
T08308
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118099682 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118099682 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118099682 (snw1)
Spliceosome [BR:
hsp03041
]
Complex B
Other components
Prp19-related factors
118099682 (snw1)
Complex C
118099682 (snw1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
118099682
NCBI-ProteinID:
XP_035000277
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Position
20:6308537..6316076
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AA seq
536 aa
AA seq
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MSLTSFLPSPTQLSQDQLEAEERIQAQKSFSNALVSSLREPPQYGQRKSWVPRALEDFGD
GGAFPEIHVAQFPQEMGRKKKTSNALAVQVDAEGKVKYDSIARQGQSKDKVIFSKYTDLL
PKEVLNEDTPELQKPDEEAVKELTDKTRAALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVLHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKGGEDGEARERDEIRHD
RRKERQHDRNILRAAPDKRSKLQRDQERDVSELIALGMPNPRSSSEAQYDQRLFNQSKGM
DSGFAGGEDETYNVYDQPFRGNKDMASHIYRPSKNIDKDAYTDDLESLMQNNRFAPGKEF
SGADHAQRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSSRSKDDYHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgagcttcctaccttcgccgacccagctgtcccaggaccagctggaggca
gaggagaggatccaggcccagaagtccttctccaacgccctggtttcgtccctccgagag
ccccctcaatacggacagaggaagagctgggtgccgcgtgcactcgaggactttggagat
ggaggagctttcccagagatccatgtggcccagtttccccaggagatgggccggaagaag
aagacgtccaatgccctggcggtgcaggtggatgcagagggaaaggtcaaatatgactcc
atcgccagacaaggacagagcaaggataaggtgatcttcagtaaatacacagaccttctg
ccaaaggaagtgctaaatgaagacaccccagagctacagaagcctgacgaggaggcggtg
aaagaacttacagataagactcgggctgccttggacaagcaggtgtctcagaagattgct
gcagctatgcctgtaagagctgcagacaaacaggctcctgcacagtacatcagatacacc
ccatcccagcagggggtagcttttaactctggggccaaacagagagtgatccgcatggtg
gagatgcagaaagaccccatggagcctccacgtttcaagatcaacaagaagattcccaga
ggccccccctctcctcctgcccctgtcttgcattctccaagcagaaagatgacagtgaag
gaacagcaggagtggaagattcctccatgcatctccaactggaagaacgctaagggctac
accattcctctcgacaaacgtctggctgctgatggtcgggggctgcaaacggttcacatc
aatgaaaactttgccaagttggctgaggcgctctacatcgctgacagaaaggccagggag
gctgtggagatgagagcacaggtggagaagaagatggcccagaaggagaaggagaaaaag
gaggagaaactgagggagctcgcccaaatggctcgagaccgcagggcggggatcaaaagt
cacggagacaaaggtggcgaagacggcgaggccagggaacgtgacgagatccgccatgac
agacggaaagagagacaacacgacaggaacattttgagggcagctcctgataagaggtcc
aagctgcagagagaccaggagagggacgtcagtgaactgatcgctctggggatgcccaac
cctcgctcctcctccgaagctcagtacgaccagagactcttcaatcaaagcaagggtatg
gacagtggcttcgctggtggtgaggacgagacgtacaacgtctacgaccagccgttccgc
ggcaacaaagacatggcttcacacatctacaggcccagcaaaaatattgacaaggacgcc
tacacagatgaccttgagtcactcatgcaaaacaaccggtttgctcctggcaaagaattc
tccggcgccgaccacgcgcagaggcgggacggaccagtccagtttgaagaggatcccttc
ggtttggacaagttcttggaggaagccaagcagcacggtggctctaagaggccctcaacc
agcagccgctcgaaggacgactaccacgacaagaagcgcaggaaggagtga
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