Hippoglossus stenolepis (Pacific halibut): 118100113
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Entry
118100113 CDS
T08308
Symbol
sdk2b
Name
(RefSeq) protein sidekick-2 isoform X1
KO
K16353
protein sidekick
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118100113 (sdk2b)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Other
118100113 (sdk2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_Rha78A_N
Ig_C17orf99
Tissue_fac
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
118100113
NCBI-ProteinID:
XP_035000747
LinkDB
All DBs
Position
21:complement(16647071..16885026)
Genome browser
AA seq
2265 aa
AA seq
DB search
MFEDPWSGSIRRATWILSLSFLVHFTQAQDDVPPYFKTEPVRSQLHLERNRLVLTCMAEG
SWPLEFKWIHNSTELTRFSLEYRYLIPSLDRSHAGFYRCIVRNRVGALLQRRTEVQVAFM
GSFEEGERAQSVSQGEGAVVMAPRIRSFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILS
TVAPDAGRYYVQAVNDKNGENKTSQPITLSVENVGGPADPIAPTIIIPPRNTSVVTGTSE
VTMECVANARPLIKMSISWRKNGVLVSAGLSDFNRRLTVLSPVVSDSGFYECEAVLRSSS
VPSVSAGAYLHVQEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDALPIDPV
KTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNMAGEVQTNTYLAVTSIAPNITAGPSDST
VIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGT
YTCMASNSRGIDEASADLVVWARTRITTPPQDQSVIKGTKAVMTCGVTHDPSVTVRHIWD
KEGVVINVQSIPRMRLEADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHA
PENPTARLSKSEKRAIDLDWAKPFDGNSPLIRYILEVSENNAPWAILLANIEPESVVVTV
NGLIPARSYQFRLCAVNDVGKGQFSKETERVALPEESPSAPPQNVIASGRTNQSIMIQWQ
PPPESHQNGILRGYTVRYRLTGLPVDYQIKNITSPDVTNLLLEDLIIWTNYEIEVAAYNG
AGLGIFSHKVTEWTLQGVPTIAPGNVQAEPVNSTTIRFTWMAPNPQFINGINQGYKLLAW
EPGRDEHVSMVTVRPNFQDSVHVGYMTGLKKFTEYFTSALCFTTPGDGPRSPPKAARTHE
DTPGAVGHLSFTEILDTSLKVSWSVPVEKNGVLTGYRISWEEFNRTNTRVTHYLPNVTLE
YRVTGLTALTTYTIEVAGMTSKGQGQLSSSTISSGVPPELPGPPTNMAISNIGPRSVTLQ
FKPGYDGKTSISRWQVEAQVGVVGENEDWVMVHQVSNEPEARSLEVPGLNPYTFYRFRMR
QVNIVGTSPPSQPSRRIQTLPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGNAEQV
GYRVQYSRAGSLGRALIHIIADRLEREFTIEDLEEWTEYEVRVQVVNGIGMGPWSQPVKG
RTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVVYKEKDSDSAVHFWT
VEGNATHSVQLTGLGKYVLYEIQVQAFTRIGDGRPSSPPILERTLDDVPGPPVGILFPEV
RTTSVRLIWQSPSQPNGIILAYQITYHLNSTNTNTATVDVLSPSARQYTVTNLKPESIYV
FRITAQTRKGWGEAAEALVVTTEKRARPQPTSLPMVPQKDVQARQVLLSWEPGSDGLSPV
RYYTVQLRELPESNWTVHSASVNHEASSYIVSRLKPFTSYQFRVKATNDIGDSEYSEESE
AITTLQDAPDEPPAILSVTPHTTTSVLIRWQRPSEEKINGILLGFRIRYRELLYDRLRSY
SVHAISSMSSWAELTAPYSIRNLSDSTLIQYELDKLSKHKRYEIRMSVYNAVGEGPTSPP
QEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRKNETE
RLRTLFMPEGGVKLKNLTGYTTYMMSVAPFNAAGDGPRSAPTRGRTQQAAPSAPSFIHFS
ELTTTSVNVSWGDPTFPNGIIEGYRLIYEPCTPVDESSVACADCLHSPSPPGVSKTVTVD
VKGSGPLWLKLRDLADGITYNFRIRAKTFIYGPEVEANITTGPGEGAPGPPGEPFITRYG
SALTIHWTSGDPGRTPISRYVIEARPSDEGLWDILIKDIPKEATLHTFNMDILKQGVSYD
FRVIGVNDYGYGSPSLPSPSISAQKVAPFYEEWWFLVVVALVGLIFILLLVFILIIRGQS
KKYAKKSESVSLYVCPGNNSNCNALTHGDMVSLDEGRFPALELNNRRLSVKNSFCRKNGV
YTRSPPRPSPGSLHYSDEDVSTKYNDLIPAESSSLTEKPSEISDSQEALVFSYGTVGLHT
LPLHLGSDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQKGISRAQAYSYTESESGDP
DHCAPPPLPPLPPLPPQLSSPSPQPQQAQGQPQGQPQGQPQGQPQGQPQCQPQGQGSLFR
PKGSRTPTPSQQSSNPPSQQSTLYRPPSSLAPGSRAPIAGFSSFV
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggacccgtggagcggatcgatccggcgcgccacatggattttatccctttcc
ttcctcgtccactttacgcaagcacaagatgacgtgcctccctacttcaagacggagccg
gtgcgtagtcagctccatctggaacgcaacaggctggtgctgacctgcatggccgagggc
agctggccactggagttcaaatggatccacaacagcacggagttaactcgcttctcactg
gagtacaggtacctcatcccctcactggaccgctcgcacgccggcttctaccgctgcatc
gtcaggaaccgggtcggggcccttctgcagcggcgcacagaagtacaggtggccttcatg
ggcagctttgaggaaggtgaacgcgcccagtcggtgtctcagggagagggcgccgtcgtc
atggcaccacgcatccgcagcttcccccagccacaagtcacctggttcagagacgggcgc
aagatcccacccagcagccgcatcgccattactctggacaacacgctggtcatcctgtcc
acggttgccccggacgccgggcgctactacgtccaggccgtgaacgacaagaacggagag
aacaagaccagccagcccatcaccttgtccgtagagaatgtgggaggtccagccgacccc
atcgcccccaccatcatcatcccacccaggaacacgagtgtggtcacaggcacctcggag
gtcacgatggagtgcgtggccaacgccaggcctcttatcaagatgagtatctcttggcgt
aagaacggcgtgctggtgagcgccggcttgagcgacttcaaccgcaggctgaccgtcctc
agccccgtggtgagcgactccggcttctacgagtgcgaggccgtcctccgcagcagcagc
gtgccgtcagtcagcgctggggcttatctgcatgtacaagagccaccgcagtttatcaaa
gagccagagaagcacattacggccgagatggagaaggtggtggacattccctgccaggcg
cggggagtgccgcagccggacatcgtgtggtacaaggatgctctgcccatcgacccggtg
aagacgccccggtaccgggtgctggtgggaggcagcctgcaggtcaacggcctcctgccc
gacgacacggggatgttccagtgcttcgccaggaatatggcaggagaagttcagaccaac
acgtacctggctgttaccagcatcgccccgaatatcacagccggaccctccgacagcacg
gtgatcgacggcatgtcagtcatcctgcactgcgagacctcaggcgctccgaggccggct
atcacctggcagaaaggtgagcgcgtgttggccagcggctcggtgcagctgccccggttc
accctgctggagtcgggcagcctcctcatctccccctcgcacatctcagacgccgggacc
tacacctgcatggcgagcaactccaggggcatcgacgaggcgtccgcggacctcgtggtc
tgggctcgcacccgaattaccacccccccacaggaccagagtgtcatcaaaggaactaaa
gccgtcatgacgtgtggagtgacacatgaccccagtgtaactgtcaggcacatctgggac
aaagagggcgtggtcatcaacgtccagtccatccctcgcatgcgcctggaggcagacggc
accctgcacatctcccagacctggtccggtgacatcggcacgtacacgtgcagagtcacc
tccgtcggcggcaacgactcccggagcgctcacctccgcgtcaggcagctgccccatgcc
ccggagaaccccacagctcggctgagcaagtcggagaaaagagccatcgacctggattgg
gccaaaccttttgacggcaacagtcccctcatacgctacatcctggaggtttctgagaac
aatgctccctgggccatcctgctggccaatatcgagccagagtccgtggtggtgacggtc
aatggtttgatccccgcacgctcctatcagttccgcctctgcgccgttaatgacgtgggg
aaggggcagttcagcaaggagacagagcgtgtggctctgccagaggagtcccccagtgct
ccccctcagaatgtcatcgccagtggtcggaccaaccagtccatcatgatccagtggcag
cctccgccagagagccaccagaacggcatcctcaggggatacaccgtccggtaccgtctc
actgggctgcccgtggactaccagatcaaaaacatcaccagcccggacgtgaccaacctg
ctgctggaggacctcatcatctggaccaactacgagatcgaggtggccgcctacaacggg
gcaggtttgggcattttcagccacaaggtcacagagtggaccctgcagggagtgcccacc
atcgcccccggtaacgtgcaggccgagccggtcaactccacgaccatccgcttcacgtgg
atggcccccaacccccagttcatcaacggcatcaaccagggctacaagttgctggcatgg
gagcccggcagagacgagcacgtttccatggtaacagtgcgaccgaacttccaggacagc
gtccacgtggggtacatgacgggtctgaagaagttcacagagtatttcacgtcggcgctg
tgcttcaccacgcccggcgacggcccccgcagcccgcccaaagccgcgaggacacacgag
gacactcccggcgccgtgggtcacctgagtttcactgagatcctggacacgtcgctcaaa
gtcagctggagcgtgcccgtggagaagaatggcgtcctcacaggttaccgcatatcgtgg
gaggagttcaaccgaaccaacaccagggtcacccactacctgcccaatgtcaccttggag
tacagggtgaccggactcaccgcgctcaccacctacaccatcgaggtggccggcatgacg
tccaagggccagggtcagctgtcgtcctccaccatctcctccggcgtcccgccagagctt
cctggccctcccaccaacatggcaatttccaacatcggcccacgctccgtcaccctgcag
ttcaagcctgggtatgacggcaagacttccatttcccggtggcaggtggaggctcaggtc
ggtgtggtcggggagaacgaggactgggtgatggtccaccaggtgtccaacgaacccgag
gcccgctccttagaagtgccgggactcaacccgtacaccttctacaggttccgaatgcgt
caggtgaacatagtgggaaccagtcctcccagtcagccctccagaaggatccagacgctg
ccggctcctcctgacatggcccctgccaacgtcaccctgcgcaccgcgagcgagaccagc
ctctggctgcgatggatgcctttacctgaatgggaatacaacgggaacgcggagcaggtg
ggctacagagttcagtactcgcgggcgggctcactgggccgagcgctgatccacatcatc
gccgatcgcctggagagagagttcaccatcgaggacctggaggagtggacggagtacgag
gtcagggtccaggtcgtcaacggcatcgggatgggaccctggagccagccggtcaaaggc
agaaccagagagtctgtcccgtcctgtggacccaccaacgtgtcggccttcgccaccacc
tccagcagcatcctggtgcgctggttcgaggtccctgaaccggacaggaacggcctcatc
ctgggctacaaggtggtgtacaaggagaaggactctgacagtgccgtccacttctggacc
gtggaggggaacgccacgcacagcgtccagctcaccggtctggggaagtacgtgctctat
gagatccaggtccaggccttcacgcggatcggagacggacggcccagctcgccgcccatc
ctggagaggactttggacgacgtcccaggacctccggtgggtatcctgttccctgaagtg
cggaccacctcagtccggctcatctggcagtccccctcgcagcccaacggcatcatactg
gcgtaccagatcacgtaccacctcaactccaccaacaccaacacggccacagtggacgtg
ctgagcccgagcgctcgccagtacacggtgaccaacctcaagccggagtccatctacgtg
ttccgcatcacggcgcagacgaggaagggctggggcgaggcggccgaggcgctggtggtc
accacggagaagagagcccgaccgcagcccaccagccttcccatggttccccagaaggac
gtccaggcccgtcaggtgttgttgtcgtgggagccaggcagcgacggcctgtcccccgtg
cgttactacacagtgcagcttcgagagcttcctgagagcaactggaccgtccactctgcc
tccgtcaaccacgaggcctcctcctacatcgtgtccaggctgaagccctttacgtcctac
cagttcagagtgaaagccaccaatgacattggagacagcgagtacagcgaggagagtgaa
gccatcacgactctgcaggacgcgcccgacgaaccgccggccatcctctccgtgacgccg
cacacgacgacgtcagtgctgatccgctggcagcgcccctctgaggagaagatcaacggg
atcctactgggctttcggattcgctatcgtgagctgctgtacgaccgcctgcggagttac
tcagtccacgccatcagcagcatgtccagctgggcggagctcaccgccccctacagtatc
cggaatctgagtgattcaaccctgatccagtacgagttggacaagttgagtaaacacaag
cgctatgagatacgcatgagtgtatacaacgctgtgggcgaggggccaaccagcccaccg
caggaggtgtttgtgggagaagcagtgcctacagccccgccccagaatgtggccattcag
tccgcgacagccacccagctggacgtgacgtgggaccctccacctgtggacgcacagaac
ggagacatccagggctacaaggtttacttttgggagttccagcgcaagaatgagacggag
cggctgcggactctgttcatgccggagggaggagtgaaactgaagaacctgacgggttac
accacctacatgatgagcgtagcccccttcaatgcagctggggacggaccccgcagcgcg
ccaaccaggggacgcactcagcaagcagctcccagtgctcccagcttcattcacttcagt
gagctgaccaccacctcggtcaacgtctcctggggcgatccgaccttccctaacggcatc
atcgagggctaccgcctgatctacgaaccctgcacacctgtagatgagtcttcagtggcc
tgtgccgactgtcttcactccccctcccccccaggcgtcagtaagacagtgacggtggat
gtgaaggggagcgggcccctctggttgaagctcagggacctggccgatggcatcacgtac
aacttccgcatccgggccaagaccttcatctacgggccagaggtggaggccaacatcacc
acaggccccggagaaggagcccctgggccgcctggagagcccttcatcacacgctatggt
tcagccctgaccatccactggaccagcggggacccgggacgtactcccatctcacgctac
gtcatcgaggccagaccttcagatgagggattgtgggatatcttaatcaaggacatcccc
aaggaggcgacgttgcacacgttcaacatggacatcctaaagcaaggggtcagttatgac
ttccgggtaatcggagtgaacgactatggctatggatctccaagtctgccctctccttcc
atatccgcccagaaagtggcgccgttctacgaggagtggtggttcctggtggtggtggcg
ctggtggggctcatcttcatcctgctgctggtcttcatcctcattatcaggggccagagc
aagaagtacgccaaaaagtctgaatccgtgtctctctacgtttgtccaggaaacaactcc
aactgcaacgccctgacccacggagacatggtcagcctggacgagggacggttcccggct
ctggagctcaacaaccggcggctctccgtgaaaaactccttctgccggaagaacggcgtc
tacaccaggtctcctcccaggcccagtccaggcagtcttcactactcggacgaagacgtc
agcacaaagtacaatgacctgatccctgcagagagcagcagcctgactgaaaaaccctct
gaaatctctgactcacaggaggcgctggtgttttcatatgggacagttggcctacataca
cttccactgcatttgggcagcgacagcgagtacgaggtggaccccaaccgacagaagacc
cactccttcgtcaaccactacatcagcgaccccacctactacaactcttggcgccgccag
cagaagggcatatcccgggcgcaggcctacagctacaccgagtctgagtcgggcgacccg
gaccactgcgccccgcccccgctgcctcctctaccgccgctgccgccccagctcagttca
cccagcccccagccccagcaggcccagggccagccccagggtcagccccagggtcagccc
caaggtcagccccagggccagccccagtgccagccccagggccaaggcagcctgtttagg
cccaaaggtagccggactcccaccccctcccagcagagctccaacccccccagccagcaa
agcaccctctacaggcccccgagcagtctagcaccgggatcgcgggccccaattgccggc
ttctcctcctttgtgtaa
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