Hippoglossus stenolepis (Pacific halibut): 118100154
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Entry
118100154 CDS
T08308
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118100154 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118100154 (vti1a)
Membrane trafficking [BR:
hsp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
118100154 (vti1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec8_N
Sec20
Laminin_II
Mer2
BPS1
CAP59_mtransfer
DUF1664
DUF5344
DUF4162
Motif
Other DBs
NCBI-GeneID:
118100154
NCBI-ProteinID:
XP_035000811
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All DBs
Position
21:13399801..13509663
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AA seq
224 aa
AA seq
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MSSDFEAYEQDFGTATAEITNKIGRVPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPVQSRAMFNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRNDLLGDDAGSSENQLIKLRE
ERAHLLDNTEKIERSSRRLEAGYQIAVETEQVGQEILANLHTDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRVLIFILGSIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaagcctacgagcaggacttcgggaccgccacggcagagataacc
aacaaaatcggcagagttcccaaactgagcggggaggagaagacgcagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagattcccgtccagagtcgagccatgttcaacagcagactgaagagctacaagcaggaa
atggagaagctggagaaagactttaaaaggtcacgcattgcctacagtgatgaggtgcgc
aacgatctcctgggggacgacgccggctcctccgagaaccagttgataaagttacgcgaa
gagagagcgcatctgttggacaacacagagaagatagaaaggtcatcgcggagactggag
gccggctaccagatagcagtagaaactgaacaagtgggccaggagattcttgccaacctg
cacaccgaccgtgagaagatccagcgagccagagaaaggctgagagaaacagacgccaac
ctgggcaagagttctcgcatccttaccggcatgctgagaaggatcatccagaaccgtgtc
ctgatcttcatcctcggatccatcatccttctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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