Hippoglossus stenolepis (Pacific halibut): 118100162
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Entry
118100162 CDS
T08308
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118100162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118100162
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
USH complex and associated proteins
118100162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_5
Ank_3
SAM_1
Attacin_C
SAM_2
SAM_7
Motif
Other DBs
NCBI-GeneID:
118100162
NCBI-ProteinID:
XP_035000828
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All DBs
Position
21:19186666..19192316
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AA seq
477 aa
AA seq
DB search
MNDRYHRAASDGYLDVLKEATRKELNAPDEDGMTPTLWAAYHGHLEALRLIVGRGGDPDR
CDIWGNTPLHLAAANGHHNCLSFLVVFGANVWCLDNDYHTPLDMSATKGHMDCVRYLDSI
AAKQTTLNSKLVGKLKDRAFRAAERRIKDCAKLQRKHREHMERKFMKESAALDNLDAISF
SSYTSSSTLSRKFNTVTSNMPYSQATLHSTAKGKAKIQKRLEKKKQVDGTFKIYEDGRKS
VRSLSGLQLGNDVMFLKQGTYTNPKQRPRLNIRHMFPGDDDDDADTVSRAMSDPGLHEAA
YSEISADSGRDSLFNRPGLGTMVFRRNYLSRGVFGIGAQDEGSVVGSEPVGRAPNVRLHG
HLPRRSPSFDGDSIGSALSLQERNQQELPWEEDDVGLDEDLEPENSPLETFLASQNLGEF
MPIFRREKIDLQALLLCSDQDFSSIHIPLGPRKKLLDACRRRLDTLDEPEAIEDTEL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaggtaccaccgggcggccagcgacggctacctggacgtcctgaaggaggcc
acacggaaggagctcaacgcgccggacgaagacgggatgacaccgactctgtgggccgcg
taccacgggcacctggaggcgctgcggctcatcgtggggagaggaggtgaccccgacagg
tgtgacatctgggggaacacgccgctccacctggcagctgccaacggccaccacaactgc
ctgtccttcctggtggtgttcggtgccaacgtgtggtgtctggacaacgactaccacaca
ccgctggacatgtccgccaccaagggccacatggactgcgttcgctacctggactccatc
gccgccaagcagaccaccctcaactcgaagctggtcggcaaactgaaggaccgggcgttc
cgagctgcggagcgccgcatcaaagactgtgcgaagctgcagaggaagcaccgggaacac
atggagaggaagttcatgaaggagtcggcggctttagacaacctggacgctattagcttc
tctagctacaccagcagcagcacactgagccgcaagttcaacacggtcacttccaacatg
ccatactcacaggccactctgcactccaccgccaagggcaaggccaagatccagaagagg
ctggagaagaagaagcaggttgacggaacgttcaagatctacgaggacgggaggaagagt
gtgcgctcgctgtccggcctgcagctcggcaacgacgtcatgttcctgaaacagggcacc
tacaccaaccccaagcagaggccacgcctcaacatccgccacatgttccctggggacgac
gatgacgatgccgacaccgtctcccgcgccatgagcgacccgggcctccacgaggccgcg
tactcggagatcagcgcagactccggtcgtgattcgctgttcaaccgacctggacttggc
accatggtgttcaggaggaactacctgagtcggggtgtgtttgggatcggggcacaagac
gaggggagtgtcgtgggcagtgagcctgtgggcagggcgccgaatgttcgtctacatgga
catctgcctcgccgctcgcccagcttcgacggggacagtatcggcagcgcattgagcctg
caagagagaaaccagcaggagctgccctgggaggaggacgatgtgggactggacgaggac
ctggaaccggagaacagtcctctggagacgttcctggcctcacagaacctcggtgagttc
atgccgatcttcaggagggagaagatcgacctgcaggctctgctgctctgttcagaccag
gacttctccagcatccacatccctctgggccccaggaaaaaactgctggacgcctgcagg
agacgattggacacattagacgaaccagaggccattgaagacactgagctctga
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