Hippoglossus stenolepis (Pacific halibut): 118100358
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Entry
118100358 CDS
T08308
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118100358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118100358
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118100358
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
118100358
NCBI-ProteinID:
XP_047194418
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Position
21:10405414..10427371
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AA seq
1237 aa
AA seq
DB search
MMMCEVMPTISEDGRSGTGGGPSSPAGAGVGGTGGATAGGGFSGREPRGGGDEGGSTGNL
ESLMVNMLTERERLLENLRETQDCLGTAQLRLRELGHEKESLQRQLSIALPQEFAVLTKE
LNVCREHLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSS
EVEVLKALKSLFEHHKALDEKVRERLRVALERVSLLEDQLATSSQEVISLKDQIKRRQQG
VDGGKDRLPNGPSSGPEESDLERQREGEIERQRSELSQLRERLALMCRQVGEIEEQLAAA
RREVTKSEEANQKLQREVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENEL
ASKESLHRQSEEKNRQLQERLDEAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHG
NFEERLRQMEAQLEEKNQELQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHLKERM
AALEEKNALSEELSNMKKIQDDLIANKETLLAELERIQLELDQLRGRPGSYSRAGSVSSL
PSTLFRRSLPGSASELRYPQGGGSLPAGYSNSNSGVVVRRSHRGRWGQSRDDSNKYGDWD
SGTMLGPGYDGGVDGGCSDDEDDRETLFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIK
LIQEEKESTELRAEEIESRVSSVALDAPLPPSSLGGRDSVGRGYMTPSITSSTLASPSPP
SSGHSTPRLPHSPARETDRQNSKDGEECRALALIDSTPPPVPRALRLDRMTHTHPGAGLD
DHREFRSLSADGAITASQDSLHKASKKKSIKSSIGRLFGKKEKGRIGAPGRESSSLASTP
SDDLGSADPLGLAKLGTGTVEKDRRSKKKHDLLEEACRQGLPFASWDGPTVVTWLELWVG
MPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPAS
TRSSTSNIWMTHAEMESLTAVTKPEQKEFSWDQILAYGDMNHEWVGNEWLPSLGLPQYRS
YFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRRDDSQ
HQNQDVMVWSNERVMCWVQSIGLKEFADNLLESGVHGALLALDDTFDYTDLALLLQMPNQ
NTQARQLLEKEYNTLILMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSSETLPA
NFRASAISTPSVTLRKVQSEVNTGPRGESGSVRTYSC
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgcgaggtgatgcccaccatttctgaggatgggcgaagtggaaccggcggg
ggcccgtcctcgcctgctggggcaggggtcgggggcactggaggtgcgacggctggcgga
ggcttcagcgggagggagcccagaggcggaggagacgaagggggcagcacggggaacctg
gagtccctgatggtcaacatgctgacagagagggagaggctgctggagaacctgagggag
acacaggactgcctgggcacggctcagctccgcctccgcgagctcggccacgaaaaggag
tcactccagaggcagctgtccattgctctgccacaggagtttgctgtgttgactaaagag
ctgaacgtttgccgggagcaccttctggagagggaggaggagatctctgagctcaaggcg
gagaggaacaacacacgtctgctgctggagcacctggagtgtctggtgtctcgccacgag
cgcagtctgaggatgacggtggtgaagagacaagcccagtcgcccgcgggtgtctccagt
gaggtggaagtcctcaaggccctcaagtctctgtttgagcaccacaaggccctagatgag
aaggtgcgagagaggctccgcgtggcccttgagagggtttccttgttagaggatcaactc
gcaacgtcttctcaagaggtaatctctttaaaagaccaaattaaaagacgtcaacaaggg
gtggacggcgggaaagatcgactacccaacggcccctcctctggcccggaggaaagcgac
ctggagagacagagagagggagagatagagcgacagaggtcggaactctcccagctgagg
gagaggctggccctcatgtgccggcaggttggggaaatagaggaacagcttgcggccgcc
aggagggaggtgacgaagtcggaggaggccaatcagaagctccaaagggaagtgaaagag
gctctttgccaaagggaggacatggaggaaaggatcacaacattagaacgcaggtacctc
agtgcccagagggaggcgacttctctccatgatatcaaagacaagctggagaatgagctg
gccagcaaggagtccctgcacagacagagtgaagagaagaaccgacagctacaggagcgg
ctggatgaggccaagcagaagctccagcagaccctgcagagggcagagacgttgcctgag
atcgaggcccagctcgcccaaagagtagccgctctcaacaaggcagaggagcgccacgga
aactttgaggaacggctacggcaaatggaggctcaactcgaagagaagaaccaagaacta
cagagggcgaggcagagggagaagatgaacgacgaacacaacaaacgtctctcggacacg
gtggacaagcttctgtctgagtccaacgagagactgcagctccacctcaaagagaggatg
gcagcactagaggagaagaacgctctgtcagaggaactgtccaatatgaagaaaatccaa
gatgatcttatcgctaataaggagacgctgcttgcggagctggagcggatccaactggag
ctggatcagctgagaggccggcctggctcttattccagggcgggcagcgtgagctcactt
ccctccaccctgtttcgaagatctctcccagggagcgcctcagagctgcggtacccccag
ggcggcggctcgctcccggccggctacagcaactccaatagtggggtggtggtcaggcgg
tcgcaccgcggccgctgggggcagtctagagacgatagtaacaagtatggagactgggac
agcgggactatgctgggtcctgggtatgacggcggtgtggacggaggctgctccgatgac
gaggacgacagagagactctgtttggatcggagcttctctctcccagcggacagacggat
gtacagaccttagccatcatgctacaggaacaactggaggccattaacaaggagatcaag
ctgattcaggaggagaaggagagcacggagctgagggccgaggagatcgagagccgggtc
agcagcgtggccctcgacgctccccttccgccctcctcactgggaggacgggacagcgtt
gggcggggctacatgacaccctccatcacctcctccacgttggcgtctccctcaccgccc
agttctggacattccaccccccgcctgccgcactcccccgccagggagacggacagacag
aatagcaaagatggtgaagaatgcagagcacttgccctgattgactcgacccctcctcct
gttcctcgcgccctacgattggaccgaatgacacacactcacccaggggccggcctcgac
gaccaccgtgaattccgcagtctctctgccgatggcgccatcactgctagccaggattcc
ctccacaaagccagcaaaaagaaaagcattaagtcgtcaatcggccgcctctttggcaaa
aaggaaaaggggaggatcggggcacctgggcgcgagtcttcctcactggcctccactccg
tctgatgacctgggctctgcggaccctctgggtctggccaaacttgggactggaacagtg
gaaaaagaccgccgtagcaaaaagaagcacgacctgttggaggaggcctgtcgtcagggt
ctgcctttcgcctcgtgggacggccccactgttgttacatggctcgagctgtgggtcggg
atgcccgcgtggtacgtggcagcgtgccgcgccaacgtgaagagcggcgccatcatggcc
aacctctcggacacggagatccagagggagattggcatcagcaacccgctgcacaggctg
aaactccgcctggccatccaggagatggtctccctcaccagtccgtccgcaccagcaagc
actcgctcttcgaccagtaatatatggatgacacatgctgagatggagtctctcactgct
gtcaccaaaccagagcagaaagagttcagctgggaccagatcctggcctacggagacatg
aaccacgagtgggtgggaaacgagtggctgccaagcctgggtctcccccagtaccgctcc
tacttcatggagtccctggtggatgcccgcatgctggatcatctcaccaagaaggagctg
aggggtcagctgaaaatggtggacagtttccacagggtgagtcttcactatggcatcatg
tgcttgaagcgcttgaactatgacaggaaggagctggagaggaggagggacgacagccaa
catcagaatcaagatgtgatggtatggtccaatgagcgcgtgatgtgctgggtgcagtca
attgggctgaaggagtttgcggacaacctattggaaagcggcgtgcacggggccctcctg
gcgctagacgacaccttcgactacaccgacttggccctcctcctgcagatgcccaatcag
aacacgcaggcaaggcagctcctcgagaaggagtacaacactctgatcttaatgggaaca
gagaggaggccagatgaggacggcacaaaaacctttacacggtcgccatcgtggagaaag
atgttccgggagaaggacctccgcggcgtgacctccgactcctcagaaacgttacctgcc
aacttccgtgcctccgccatctccactccctctgtcaccctgagaaaagtgcagagtgaa
gtaaacactggtccaaggggggagtcggggtccgtgagaacatattcctgctaa
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