Hippoglossus stenolepis (Pacific halibut): 118100398
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Entry
118100398 CDS
T08308
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04510
Focal adhesion
hsp04517
IgSF CAM signaling
hsp04518
Integrin signaling
hsp04519
Cadherin signaling
hsp04520
Adherens junction
hsp04810
Regulation of actin cytoskeleton
hsp04820
Cytoskeleton in muscle cells
hsp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118100398
04518 Integrin signaling
118100398
04519 Cadherin signaling
118100398
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118100398
04520 Adherens junction
118100398
09142 Cell motility
04820 Cytoskeleton in muscle cells
118100398
04810 Regulation of actin cytoskeleton
118100398
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118100398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118100398
04147 Exosome [BR:
hsp04147
]
118100398
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118100398
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118100398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
118100398
NCBI-ProteinID:
XP_035001318
LinkDB
All DBs
Position
21:complement(13322049..13347030)
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AA seq
1067 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGRE
TVQTTEDQVMKRDMPPAFSKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMGDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSGE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALGLIDSKMSQAKNWLRDPNAQPGDQGEHAI
RQILDEAGKVGELCAGKERRDILGTAKTLSQMTDQVSDMRARGQGASPAAMQKAQQVSQG
LDVLTGKVENAARKLEAMTNSKQAIAKRIDAAQNWLADPNSGPEGEENIRALLMEAKRIA
DMCEDPKEREDILRSIGEIAAMTAKLSDLRRQGRGDTPEARNLAKQIATALQNLQSKTNK
AVANSRPAKAAVHLEGKIEQAHRWIDNPTVDDSGVGQAAIRGLVAEGRRLANALPGPYRQ
EMLGKCEQVEQLMAQLADLAARGEGESPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIF
SDTTTPIKLLAVAATAPLESPNRDEVFDERAANFENHANKLGTTAEKAAAVGTANKSTVE
GIQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEDAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REMVKAASDELSQTISPMVMDAKAVAGNIHDPSLQKGFLDSGYKILGAVAKVREAFQPQE
PDFPPPPPELEQLSLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQPAGVMVNEPMM
VAARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttccacacgaagacgatagaaagtatcctggagccggtggcccagcagata
tcccatctggtgataatgcacgaagaaggggaagtggacgggaaagctatcccagacctg
acggctccggtggcggccgtgcaggcggctgttagcaacctagtgcgggtggggagggag
actgtacaaaccacagaggaccaggtcatgaaaagggacatgccaccagcttttagcaaa
gtggagactgcatgcactaagctggtgcaggctgcctccatgctgaaagctgatccctac
tccgttcctgctcgtgattacctcatcgatggctcccggggcatcctctccgggacctct
gaccttctcctgactttcgatgaagctgaggtccgcaaaataatccgtgtgtgcaaaggg
atccttgagtacctgacggtggcagaggtggtggagtctatgggggacctggtcacatac
acaaagaacctcggaccaggaatgacgaagatggcaaagatgatagatgaacgacagcag
gagctgacccaccaggagcaccgtgtgatgctggtcaactccatgaacacagtcaaagag
ctgctgccgatcctcatctcaggtatcaaaatatttgtgacaaccaaaacctccggcagc
cagggtgtggaggaggccttgaagaaccgtaacttcacttttgagaagatgagtggcgag
ataaacgagatcatcagagttctgcagctcacatcctgggacgaggacgcgtgggccaac
aagaaggacacggaggccatgaagagggctctggggctcatcgactcaaagatgtctcag
gctaagaattggctgagggatccaaacgctcaacctggggaccaaggcgagcacgccatt
cgacagatcctcgacgaggccgggaaggtcggcgaactgtgtgctgggaaggagcggcga
gatatcctgggcacggccaagaccctgagccagatgaccgaccaggtgtctgacatgaga
gccagaggtcagggggcatccccagccgccatgcagaaggcccagcaggtttcccaaggg
ctcgacgtgctaactggcaaggtggagaacgccgctcgcaaactggaagccatgactaac
tccaagcaggcgatcgccaaaaggattgacgctgcacaaaattggctcgcagaccctaat
agcggcccagagggagaggagaacatcagggctctgctcatggaggccaaaaggattgca
gacatgtgcgaggatcctaaagaaagagaagacattttgcgctctattggagagatcgct
gccatgactgccaagctgtcggatctcagaagacagggtagaggtgacactcctgaagcc
agaaatttggctaaacagattgccacagctctgcagaacctgcaatccaagaccaacaaa
gctgtggccaacagcaggccggcgaaggcagctgttcatttggaggggaagatcgagcag
gcccatcgctggattgacaatcccacagtggatgatagcggcgtgggccaggcagcgatc
cgcggcctggtggcagagggccgcaggctggccaacgctctgccggggccgtacaggcag
gaaatgctgggtaaatgtgagcaggtggagcagctcatggcgcagctcgccgacctggct
gcccgcggtgaaggggaatcaccacaggccagagctgtggctcagcagctccaggaggct
ttgaaagacctgaaaggaaagatgcaggaagcgatgactcaggaggtgtccgacatcttc
agtgacaccacgacccccatcaagttactggcggtggcggctacggctccgctggaatcc
cccaaccgagatgaggtctttgacgaacgcgctgccaactttgagaaccacgccaataag
cttggcaccaccgcagagaaggcggctgcagtcggcacggccaacaagagcacagtggag
ggaatccaggccgctgtcaaatcaacgagagacttaacaccacaagtggtatcagccgct
cgtatcctgctgagaaaccctggcaaccaagccgcgtatgaacattttgaaaccatgaag
aatcagtggattgacaatgtggaaaaaatgacaggtttggtggacgaggccatcgacacc
aaatctctcctggatgcctcagaggacgccatcaagaaggacctggataagtgccgcgtg
gccatggccaaccaccaacctcagatgctggtcgccggcgccaccagcatcgcccgcaga
gccaaccgcatcctcctggtggcgaagcgagaggtggagaactctgaagatcctaaattc
agggagatggtgaaggctgcgtccgatgaactgagccagacgatttctccgatggtgatg
gacgcgaaggcggtggctggaaatatccacgatccaagtcttcagaagggcttcctggac
tcaggttataagattctcggtgctgtagcaaaggtcagggaggccttccagccgcaagag
ccagacttcccacctcctcctccagaactggaacaacttagtctcaatgatgaagcagca
ccccccaagcctccccttccagagggtgaggttcctccccccaggcctcctcctcctgag
gagaaagacgaggacttccctgagcagccggctggcgtcatggttaacgagcccatgatg
gtcgctgccaggcagctccacgatgaagcccgcaaatggtccagcaaaggaaatgacatc
atcggcgctgccaaacgaatggccttgctcatggcggagatgtcacgtctggtgcgcgga
ggcagcggcaacaagcgcgccctcatccagtgcgccaaggacatcgctaaggcttctgat
gaagtcacgcggctggcgaaggaggtggccaagcagtgcactgacaagcgaatccggacc
aacctgctccaggtgtgtgaacgcattcccaccatcagcactcagctcaaaatcctgtcc
acagtcaaggccaccatgctgggtcgtaccaacatcagcgaagaggagtcagagcaggcc
actgagatgttggtccacaacgctcagaacctgatgcagtccgtgaaggagactgtcagg
gaggccgaggcagcttccattaagatccggacagatgcaggtttcacccttcactggatc
aggaagaccccctggtaccagtaa
DBGET
integrated database retrieval system
