Hippoglossus stenolepis (Pacific halibut): 118100431
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Entry
118100431 CDS
T08308
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118100431 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118100431 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118100431 (srsf2a)
Spliceosome [BR:
hsp03041
]
Common components
Common spliceosomal components
SR proteins
118100431 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_8
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
118100431
NCBI-ProteinID:
XP_035001409
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All DBs
Position
21:17364830..17368379
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AA seq
215 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFLDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRRGAPPRRYGGRSDSPRRR
RRSRSRSRSRSRSRSRSRHHYSRSRSRSYSRSRSRSKSKSRTPRRSKSKSPSRSRSRSRS
KSRSRTPPSNRGSKSRSRSKSKSRPKSPEDNEAEP
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggccgccgccagacgtggaggggatgacctccctcaaagtggacaac
ctcacctaccggacgtccccggagaccttgcgccgggtgtttgagaagtacggccgcgtc
ggggacgtgtacatcccccgggaccgctacaccaaggagagccgcggcttcgccttcgtg
cggttcctcgacaagcgcgacgccgaggacgcgatggacgcgatggacggcgcgctgctg
gacgggcgggagctccgggtgcagatggcccgctacggacgaccgccggactccatgtac
agccggaggggagctccgccgcgcagatacggaggacgttccgacagcccccggcgccgc
agacgtagccgcagccgctccaggagcaggagccgttcccgatccaggagccgccatcac
tacagccgctccaggtcccgctcctactccagatccaggtcgaggtccaagtccaagtcc
agaaccccgaggaggagcaagtcaaagtccccctccaggtctcgctcccgctccagatcc
aagtcaaggagtcgaaccccaccctccaacagggggtccaaatccaggtccaggtccaaa
tccaagagtaggcctaaatcaccagaggacaacgaagctgagccttga
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