Hippoglossus stenolepis (Pacific halibut): 118100462
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Entry
118100462 CDS
T08308
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04382
Cornified envelope formation
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
hsp04810
Regulation of actin cytoskeleton
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118100462 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118100462 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118100462 (itgb4)
04810 Regulation of actin cytoskeleton
118100462 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118100462 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118100462 (itgb4)
04515 Cell adhesion molecules [BR:
hsp04515
]
118100462 (itgb4)
04090 CD molecules [BR:
hsp04090
]
118100462 (itgb4)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118100462 (itgb4)
Exosomal proteins of bladder cancer cells
118100462 (itgb4)
Cell adhesion molecules [BR:
hsp04515
]
Integrins
Integrin beta subunits
118100462 (itgb4)
CD molecules [BR:
hsp04090
]
Proteins
118100462 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
PSI_integrin
I-EGF_1
EGF_Teneurin
EGF_integrin
EGF_2
vWA_SIBA-E
I-set
Motif
Other DBs
NCBI-GeneID:
118100462
NCBI-ProteinID:
XP_035001498
LinkDB
All DBs
Position
21:4681116..4709591
Genome browser
AA seq
1996 aa
AA seq
DB search
MGRWVLYLSVGLGLLAILLTSCYAEENYCFKARDKSCSECLQAGKDCAYCPDENFDGPRC
DLYENIRTHGCSGAALITAKSERIVMRAQQINMKHSQSQVSPQRMSMSFLPGEEKVVDVD
VFSPTKGPLDLYILMDFSNSMADDLANLKKMGNELSRLIGNLSNDPTIGFGKFVDKVIEP
QTDMRPSKLKTPWPDSDPPFSFQNVIKLTKDVNEFTSKLQKEKISGNLDAPEGGFDAILQ
AAVCGNRIGWRNHSTHLLVFSTESAFHYEADGANVLSGILPRNDERCHLDAVGKYTEDTK
QDYPSIPTLVRVLGKHNIIPIFAVTNHSYTYYKKLQEYFPIAEVGLLQEDSSNILEVMET
AFKNIRSKMSIHTEETPKAFKSQFMTTEGQLSEYGNFNFQPGEIGRFKMRLKAQRMIDET
PVCQTNQEDKEGTMRVKPTTFNNAFSIEASILCPTCECEKTPVLKSAKCHSNGDMRCGKC
QCFDGWLGAFCNCSVSSSAQDTSRCKIPGNTEPCSGRGECKQCGGCVCSNPDQFEGPYCQ
YDKTQCPRSGGFLCNDRGTCSMGSCVCGKGWSGKACECTNSNQTCLDNKGGICNGVAKCV
CGRCQCNNTGVEMTSTCEPNFQAQLGVCEGTRDCVQCQAWKTGKKEDCKNCPFKITMVDE
LKEADKVLDSCSFRDEDDDCTYHYTAENPTDSKNGILDVQVLKKKDCPAASLLWLLPLLL
FLLLLLALLLLCCWKYCACCKTCCQSCLALLPCCRKGRMVGFKEDEYLLRQSLLTSDHLD
TPMVRTGPPKGTDVVRWKVTDNVHRGPNHPQALMKPNPKETIQFPLSVRLNRLFSEILSR
PESKEADQLRKEAADNLNEVYKQIPGAQKVQKTAFRMQRNAGKRQDYTIMDTVLSAPRSS
FPDIVKLTEKNVQSGNFQDLKVVPGYYTVATDREASGAIEFQEGVESVDVHVPLFVKEED
DDKKQLLVEAADVPLGIAEIGKRLVNITIIKEHATSVFSFLQPAYTYSRQDGVANIPISR
EIIEDGRTQVTYRSRDLTAKDKKDYITVEGDLTYVPGETQKTVPVRLLELVEKDGLLEDK
QVKQFVMDLSNPRQGAKLGRYPRTTVTIADQPEPSVMMFKKGTQNFSTFDPTYTIPVVRT
RNPDSPATVKWRTKKAQRFDLSGLLKFGPGETEKNIVIDPQNHPGPIQPETFHLELFDPS
SNASIGERKTTLVNVTEEALLPSSPGIANMLQKNSAGTKGLPPGGLLLAPGNPEAKATGP
RNIHLNWDPPPGNPMGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVCAYN
SMGEGYNTDMIACQTLEDVPGEPGRLAFNVISRTVTQVSWGEPAETNGNITAYEVIYTPI
DDNLKPVGAAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAKNSVGWGPFRDASINLASQP
TRPLSIPIIPDIPIVDAEAGDEYDGYLMYSNEVMKSPGGSKTPSVSGDDFGMNGKWDQNF
LFPGGSATRNLSASSSPMSTLSSNYRAGGGSFTTDTSTTYMSGAGGSRRMDMIGGGVHTS
EVIMRKRSESRGYAEENIRDSIVMGDVSGKFPDLGGFGYTGMQSSSQSQFSYSLPQVSRS
RTQSSDVNEALYSLDRVLQDQRLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKELLGY
CVLYQLISGGDAKRINVTNPAENSVIIQDLLPNHSYLFKVKAQSQEGWGQEREGVITIES
AVDPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQ
LHGGSDTRSFQVNGDSAETSLTVPNLTENIPYKFKVQARTTQGFGPEREGIITIESQDGG
ALSQYSNQSMSMREVFQMPTEVSTRTNISHIDNNQSMSMREGFQMPTEVSTRTNISHIDN
NQSMSMREVFQMPTEVSTRTNISHTMVDDPYFSEGMMMTTQHSETSGMVTRQITKEVVER
GFIGGTTVTKKMFYES
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggggagatgggtgttatatctctcagtggggcttgggcttctagccatcctgttgacc
tcctgttatgctgaagagaactactgcttcaaggcccgggacaagagctgctccgagtgc
ctgcaggctgggaaagactgcgcctactgccctgatgagaactttgacggcccgcgctgt
gacctgtatgaaaacatacgcacccacggctgcagtggtgcggctcttatcacagctaaa
agcgaaaggattgtgatgagggcacaacagatcaacatgaagcacagtcagtctcaggtg
tctccacagcggatgagcatgagcttccttccaggagaggagaaggtggtggacgtggac
gtgttttctccgaccaaaggtcctctggatctttatattcttatggatttctccaactcc
atggctgatgatttggccaacttgaagaagatgggcaatgagctatctcggttgattggg
aacctgtcaaatgaccccaccattggctttgggaagtttgttgacaaagtgattgagccc
cagacggacatgagaccctccaaacttaaaacgccatggcccgacagtgaccctccattc
tccttccaaaacgtcatcaagctgaccaaagatgtgaacgaattcacctcaaagctccag
aaggagaaaatatctggcaacctggacgctcctgaaggagggtttgacgccatattgcag
gctgcagtttgtgggaatagaatcggttggcgaaaccacagcacacatctcctggttttc
tccaccgagtcagccttccactacgaggcagatggcgctaacgtactgtccggcatcctg
ccacgcaacgacgaacgctgccacctggacgcagtgggcaaatacacagaggataccaaa
caggattacccatcaatacccacgctggtccgcgtgcttggcaaacacaacatcatcccc
atatttgctgttaccaaccactcatacacgtactacaagaaacttcaggaatatttcccc
attgctgaggttggtctgctgcaagaggattcctctaacatcctggaggtcatggagacc
gccttcaagaatatccgttccaagatgagcatccatacggaggagacacccaaagcgttc
aagtctcagttcatgacgaccgagggacaactttcagaatacgggaactttaatttccag
cctggagaaattggtaggttcaagatgcgtctcaaagcccagaggatgattgacgaaacg
cctgtctgccagactaatcaggaagataaggaggggacgatgagagtcaagcccaccacc
ttcaataacgctttcagcattgaggcctcgattctgtgtccgacctgcgaatgtgagaag
actcccgtccttaaatcagccaaatgccacagcaatggagacatgaggtgtgggaagtgt
cagtgttttgatggctggttgggtgcattctgtaactgctcagtgagttcttcagctcag
gacaccagccggtgcaaaatcccgggcaatacggagccttgttcaggtcgcggggagtgc
aagcagtgtggaggctgtgtgtgctccaacccagatcagtttgagggaccatactgtcag
tacgacaagacccagtgtccacgatctggaggcttcctctgcaacgaccgtggcacttgc
tcgatgggtagctgtgtatgtggaaaaggctggagtggaaaagcctgcgagtgtaccaat
agcaaccagacctgtctggacaacaaggggggtatctgcaatggggtagctaaatgtgtc
tgcggtcgctgtcagtgcaacaacactggcgtggagatgacttcgacctgtgagccaaat
ttccaggcccagctgggcgtgtgtgagggtacaagggattgtgtccagtgtcaagcctgg
aagacgggaaagaaggaggactgtaagaactgccccttcaaaattaccatggtggatgaa
ctcaaagaagcggacaaagtgcttgattcgtgcagtttccgtgacgaagatgatgactgt
acctaccactacactgctgagaaccccacagattcaaaaaatggaatcttggacgtccaa
gtgctcaaaaagaaagattgtcccgctgccagcctcctgtggctgctgcctctcctcttg
ttcctgttgttactgttggcactcctgctgctctgctgctggaaatactgtgcctgctgc
aaaacctgctgccagagctgtcttgccctgctgccttgttgtaggaaaggtcgcatggtc
ggcttcaaggaagatgagtatttgctccgccagtctctgctcacctcagaccatctggac
acgccaatggtgaggactggtccacccaaagggactgatgtggttcgctggaaggtgaca
gataatgtacacagaggacccaatcacccccaggctctgatgaagccaaatcctaaagag
actatccagttcccactctccgtccggctgaacaggctgttctctgaaatcctgtcccgc
cctgaatccaaagaagcagatcagctccgcaaagaagcggccgataacctcaatgaggtg
tacaaacagattcctggggcccagaaggtgcagaagaccgctttcagaatgcagagaaat
gctggaaaaaggcaggactacaccatcatggacactgtcttgtccgctcctcgtagcagc
tttcctgatattgttaaactcacagagaaaaatgtccagtctggaaacttccaagacctc
aaggtggtgcctggctactacactgtggccacagacagagaggcttcgggagccatcgag
ttccaggaaggtgtggagtcagtagacgttcatgtgccgctctttgtcaaagaagaagac
gatgacaagaagcagctgcttgtggaggctgcggatgtgccgctaggcattgctgagatc
ggaaaacgtttggtcaacatcaccatcatcaaagagcatgccaccagtgtgttctcgttc
ctccagccggcctacacatacagcagacaggatggagtggccaacattccaatcagcagg
gagatcattgaggatggacgaacacaggtcacataccgctcacgggatctcacagccaag
gacaaaaaggactatataactgtggaaggagacctgacctatgttcctggtgagacccag
aagacagttcctgttcgtctgctggagctggttgagaaagatggcctcctcgaagacaaa
caggtcaagcagtttgtcatggacctcagtaacccacggcagggagcgaagctggggcgc
tacccgagaactactgtcaccatcgcagaccagccagagcccagcgtgatgatgttcaaa
aagggcacccagaacttctccacatttgacccgacctacaccattcctgtggtgcgtact
cgaaacccggatagccccgccacagtgaaatggcgtacaaagaaggcccagcgcttcgat
ctctctggccttctgaagtttggtcctggagaaacagagaagaacatagtgatcgacccg
caaaaccatcctggtccaatccagcctgagactttccatctggagctgttcgacccaagt
agcaatgcttctattggagagaggaagaccacccttgtcaatgtcacagaagaagctctc
cttccatcaagtcctgggatcgccaacatgttgcagaagaactccgccggcacgaaaggc
ttgccccctggtggtctccttctcgctccaggaaaccctgaagccaaagcaactggaccc
agaaatattcacctgaactgggacccaccacctggtaacccaatgggttacaaggtgaag
tactggatttacggcgacccagagaaagacgcccaggtcttggatgtgaagacgcctcaa
gctgagttgaccaacctctacccctattgcgactacgagatgcgagtgtgcgcctataat
tcaatgggagaaggctacaatacagacatgattgcctgtcagaccctggaagacgtgcct
ggtgaaccaggacgtttggcctttaacgtcatcagccggactgtcactcaggtcagctgg
ggggagcccgcagagacaaacggcaacatcacagcctacgaggtcatctacacacccatc
gatgataacctgaagccggtgggcgccgccaagaaagtaaagatcgacaaccccaagaaa
cgaatgctgttgatcgagaaccttcagagcgcccaaacctaccagtacaaggtccgtgcc
aagaatagtgtgggctggggtcccttcagagatgcttccatcaaccttgcatcacagcct
accagaccactgtccattcccattattccagacatccctattgtggatgcagaggcagga
gacgagtacgacggctacctgatgtacagcaacgaggtgatgaagtcccctggaggctcc
aagactcccagcgtctctggtgatgatttcgggatgaatgggaagtgggatcagaacttc
cttttcccggggggatcagcgacacgcaacctgtcagcttcatcctctcctatgtccacc
ctgagctcgaactacagagcaggaggcggctccttcaccacagacacatccaccacctac
atgtccggagcaggaggctctcgcaggatggatatgattgggggtggagtacatacatcg
gaagtcatcatgaggaagcgctcggagtccaggggatacgcagaagagaacatccgggac
tcaattgtcatgggagatgtgtcgggcaaatttccagatctgggtggtttcggctacact
gggatgcagagcagctctcagagtcagttcagctacagcctgcctcaggtttccaggtcc
aggacccagtcttcagatgtcaacgaagccttatatagtctggacagggtgctccaggat
caacgactttcccctggggtcccagacacccccagcagactggtgttctccgctctgggt
cccactgccctcaaggtcagctggcaggagccccactgtgagaaagaactccttggctac
tgtgtcctctaccagctgatcagtggaggtgatgcaaagcgcatcaacgtgacgaaccca
gcagagaactctgtgatcatccaggacctgctgcccaaccactcctacctatttaaggtg
aaggctcagagccaggagggctggggccaggaaagagaaggagtcatcaccatcgagtct
gcagtcgatcccaagagtcccctcagcccaatgccaggctcaccattcactctgagcacc
cccagtgctccaggccccttggtcttcactgctctgagccccgattcgctgcagctcagc
tgggagaaacctcgcaaacccaacggagacatcctgggctacgtggtcacctgcgaacag
ctgcacggtggaagtgacacacgttccttccaggtgaacggcgacagtgctgagaccagc
ctcactgtccccaacctgactgagaacattccctacaagttcaaagttcaggctcgaacc
acacagggcttcggtccagagagggagggcatcatcaccatcgaatctcaagatggaggt
gcactgtctcagtacagtaaccagtcaatgtcaatgagggaggttttccaaatgccaaca
gaagtcagcacacggaccaacatctcacacatcgacaataaccagtcaatgtcgatgagg
gagggtttccaaatgccaacagaagtcagcacacggaccaacatctcacacatcgacaat
aaccagtcaatgtcgatgagggaggttttccaaatgccaacagaagtcagcacacggacc
aacatctcacacaccatggtcgacgacccctacttctcagaggggatgatgatgaccaca
cagcactcggagaccagcggcatggtgactcgtcagatcaccaaggaggtggttgagagg
ggcttcataggaggaacaactgtcacaaagaagatgttttatgaatcataa
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integrated database retrieval system
