Hippoglossus stenolepis (Pacific halibut): 118100468
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Entry
118100468 CDS
T08308
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118100468 (vps35l)
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Others
Retriever complex
118100468 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5667
Motif
Other DBs
NCBI-GeneID:
118100468
NCBI-ProteinID:
XP_035001519
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All DBs
Position
21:6707345..6719878
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AA seq
972 aa
AA seq
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MAAVQWRSRGRSYEAELQKCRPEAALVEFGDYHPIKPIMVTDTKTRRGTRKGSTSSSSSS
SSSVPPDPLSSMMDGTDPLSMFAAASASETPAISHSASAGDLGRKRREKDEEAVGPDFEP
WSSKRGDILARFTTTEKLSINLFMGSDRGKAPSPGASAVSEKVRTRLEELDDLEEGSQRE
LLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGQLVYDRIWSMCSDPQPLPDSFTVEDVNDTAKETCLNWFFKIASIRELLPRLYV
EAAILKCNRFLNKSGIQETLPRLTAMVRGIGDPLVAAYTRAYLCRVGMEVAPHLKDSLNR
NFFDLLGTFRQISGESVRKQLVMQRVEVPEYLTLYSPAISWILQCIAHRAPDPLLTEMME
RCKKVGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRTLACAD
PPESERLTILNEAWKVITKVRSPQDYVNCAEIWVEFTCRHFTKREVNTILADIIKHMTPD
RAFEDAYPQLQSVITKVLTCFQDFSVLFAMERFLPFLDMFQKDSVRVEVCRSIMEVFIKH
QVDLTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVSFGRDFEQQLSF
CVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFITIPSLS
SIFSRLSLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISVDGKLRSSESFLLDFI
NNFLAMLLVVPDHPEHGVLYLVRGLLNVVQDYTWEDNSDAKVRVYISALPLLAAMSQETY
LYSVPKVDSNETLYGGDPKFLSEINKLCETLIGQILDHLKILGRDEVRTEQNARRQGTVA
LSLFAVLLAHGDLRNNKLSQLTINLWNLSHKHGCCETRISVRTLESIKHQAQQPDMAHLS
DTVQRLTLQSRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgcagtggcgctcccgcgggcgcagctatgaggcggagctgcagaagtgt
cgtcctgaggcggctctggttgagtttggagactaccatcccatcaagcccataatggtg
actgatacaaagacccgtcgtgggactcgtaaaggaagcacctcctcctcttcctcctcc
tcttcctcagtgcccccggaccccctaagctccatgatggatgggactgaccccttgtcc
atgtttgcagcagcctcagccagtgagactccagccatttcacacagcgcctccgcaggg
gaccttggaagaaagaggagggagaaggatgaagaggccgtgggaccagactttgagccc
tggtcatcgaagcggggagacatcctggcccggttcaccaccaccgaaaaactctcgatc
aatcttttcatgggctctgacagaggaaaagctcccagtccaggagcctcagctgtttca
gagaaagtccgcactcgcctggaggaactggatgatctggaagagggttcccagagagag
ctgctgaacctctcccagcaggattatgccaaccgcatcgaggagctgaaccagtccctg
aaggaggcgtgggcctcggaccagaaggtcaaagccctgaagattgtcattcagtgctcc
aagcttttgtctgacacctcagtgatccagttctaccccagcaagtttgtcctcatcacc
gatatccttgacacctttggtcagctagtgtacgatagaatctggagcatgtgttcggac
ccacaaccgttgccagactcgttcacggtggaagatgtgaacgacacggccaaagagacg
tgcctcaactggttcttcaagatcgcctccatcagggagctgctgcccagattatacgtg
gaggctgccattctcaagtgcaaccgcttcctcaacaaatctggcattcaggagacgctc
cctcggttgacggccatggtcagagggatcggagaccctttggtggccgcgtataccaga
gcgtacctctgcagggtgggcatggaggtggccccgcatttgaaagacagcctgaaccgc
aacttcttcgacctgcttgggaccttccgccagatcagcggcgagagcgtgcggaaacag
ctggtgatgcagagggtggaggtccccgagtacctgacgctctattcgcccgccatcagc
tggatcttgcagtgcatcgcccaccgagctccagatcctctgctaacagagatgatggag
agatgcaagaaagtaggaaacaatgccttgctgctgaattcagttatgagggcgttcagg
ccggagttcgttgcagccagagccaccgacttcatcgggatgatcaaagactgtgatgag
gccggcttcccaaagcatctgctgttcggatctctgggtcgcaccctggcttgtgccgac
cctccagaatctgagaggctgacgatcctgaacgaagcctggaaggtcatcaccaaagtc
cgcagtcctcaggattacgtcaactgtgctgaaatctgggtggagttcacctgccgacac
tttacaaaacgtgaggtcaacaccatcctcgctgacatcatcaaacacatgaccccggac
cgggcgttcgaagacgcctatcctcagctgcagtcggtgatcacgaaggtcctcacctgt
ttccaggacttctccgtcctcttcgccatggagcgcttcctgccgttcctggacatgttc
cagaaggacagtgtgagagtggaggtctgcagatccatcatggaggtcttcatcaaacac
caggtggatctcaccagagacccggtcatcctcaacgccatgctgcacatctgcaagacc
atgcacgactctgtcaacgctctcactctagaggatgagaaaagatctttggctctgctg
atcatcggcttcatccgcatggtttcttttggccgtgattttgagcagcagttgagtttc
tgtgtggaggccagagccaccttctgtaacctggagcccgttctggtgcagctcattcac
acggtgaaccagctggcgatggaaaccaggagggtgatgagagggagtcactcccgcaaa
acggcagcgttcgtcagggcgtgcgctgcctacagtttcatcaccatcccgtctctcagc
agcatcttcagtcgtctcagcctctatctgctgtctggtcaggttgcgttggccaatcag
tgcctctcccaggcggatgccttcctgaaggcagcggtcagtattctcccggaggtccct
cgctccatcagcgtggatgggaaacttcgctcctctgaaagcttcctgctggacttcatc
aacaacttcttggccatgcttctggttgtcccggaccatcctgagcatggcgtgctctac
ctagtccgaggtctgctcaacgtggtccaggattacacctgggaggacaacagcgacgcc
aaggtgcgggtttacatcagcgctctgcccctgctggccgccatgagccaggaaacctac
ctttactccgtccccaaagtggattccaacgagacgctctacgggggagaccccaagttt
ctctcagaaatcaacaaactttgtgagaccctgatcggacagatcctggatcatctgaag
attctgggtcgtgacgaggtgcggacagagcagaacgcacggcgtcaaggcactgtcgcc
ctctctctgttcgccgtcctgttggctcacggcgacctgaggaacaacaagctgagccag
ctcaccatcaacctgtggaacctcagccacaaacatggatgctgtgagactcgcatctcg
gtccggactctggagtccatcaaacaccaggctcagcagcccgacatggctcacctgtcg
gatacagtccagaggctcacactgcagtcccgcacctga
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