Hippoglossus stenolepis (Pacific halibut): 118100531
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Entry
118100531 CDS
T08308
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118100531 (tbc1d1)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118100531 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118100531 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
118100531 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF6979
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
118100531
NCBI-ProteinID:
XP_035001642
LinkDB
All DBs
Position
2:17010185..17050836
Genome browser
AA seq
1400 aa
AA seq
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MEGLYFEVKPRRDERRSLGISEEPRPNLTSNRQSCPSFSRLTSTHCPQKVPHAAERTAKV
EEEGEEEEEIRYKLTLIGSRPVHHLTTMAMLPWVVAEISRSRPAEKELGAGIQCAGPGDG
QLDSSTSNQKVSLSVSASWLRCVSILGEGVVWDPLTHTVLFECRPHQVTKLIHNSQEPSS
FGCLVRKTPNCACYVFQCQDKTKVPEIISTLRQAGKSSARNNDIVTVSKKPSTGGSDSSD
SSSSHLSTSSTSAAPTVVVSPTAFAKKFEVLFCGRVSVAHRKAPPALIDECIEKFSQLHG
SGTTDKGENGGRLVGGLRRALNFQSNGLGSGAVGNGATGSPTTGKRPVLFKQDLSFPSLQ
GLDENGLSPEISLTNTTDALTRSAEVQPTSLQENRTMLFMVGRSQIFLVSPDTKKVAIEK
GFREISFCSQGIRHVDHFGFICRETVEGGSCHFVCYVFQCTDESLVDEIMLTLKQAFSVA
ALQQSAKTQSQQCDSCPMQQLHRLCERIEGLQPSKTKLELQRHLASLDNQEQALVFENTM
RARPKSDQEENELVMAWLRNLYEEKQKSHQHTLPGDSSKQVCEEAAPAPVQAQQQSSSRQ
RLEQFKSRAKRSLTESLEGIWKGSSKARISRDNSEGSDSSSSIFTFNSSQEQLCLDDPLS
SSSTLPPTSPLRCHNSTGDLKHLDTSLRVSPSSSSLPGDEQPQGFRRRASTFSHPPTPSS
GFENSPVHTLNHTPQDATAATKPKLVRHYSVSTDTPHQSKHASTNSTLPPVAPCTSSSSA
LLPHHPSSPSSGARLIKRSPLVGLRARLHSSSSVPNFLKFPFLAPVQENDCPQPKSSDVA
ALSTPTAACGVGESPLRHRHSWRQQIFLRVATPQKNTDPNERGDSCHDGGRVCMGPGGVG
GSGDLSMRAVPEERTKRSKEELRDLWTKAILQQILLQRMERENQKLQATESDLQNKRLKL
DYEEITPCLKEVTLVWEKMMGTPGRARVKFDTETIHAAVAHGVPRMHRGEIWKFLSEQYL
LRQTVPSRPPANPTPYKELLKQLTSQQHAILIDLGRTFPTHPYFQAQLGAGQLSLYNILK
AYSLLDPEVGYCQGLSFIAGVLLLHMEEEDAFNMLKFLMYDVGLRKQYRPDMIVLQIQMY
QLSRLLHDYHRDLYNHLEQQEIGPSLYATPWFLTAFASHFPLGFVARVFDMLFLQGSEVI
FKVAMSLLRSHKPLILQHDSLESIVDFIKTTLPNLGLVQMEKTINQVCEMDVSKQLQAYE
VEYHVLQDELLDTPPTLNQHQRAAQLERTNQSLRQQNLDLLEELQVSHAHVHSLESRVEE
FVQSEGRLTEQVCALEEEKKQLLSTVTHLQDLLTSLGIQSSLDGHATPPAAERHAASAAA
ATTNQTVESLLHLLALPESS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactctactttgaagtgaagcccagaagagatgagcgacgcagtttggggatc
tctgaggaaccccgtccaaatctaacttcaaaccgccagtcctgtccatcattttcacgt
ctcacctccacacactgtcctcagaaagtcccccatgctgcagagaggaccgcaaaggtg
gaggaagagggagaggaagaggaggagatacgatacaaactgacattgattggttctcgg
ccggtccaccacctcacgaccatggccatgctaccctgggtggtggctgagatcagcagg
tctcggcctgcggagaaggagctgggcgcggggattcagtgtgcagggcctggagatgga
cagctggactcttctacctccaatcagaaggtttctctgagtgtgtcagcatcgtggctg
cgatgcgtgtccattctgggagagggagtcgtctgggatcctctcacacacacggtgctg
tttgagtgtcgacctcaccaggtcactaaactaatccacaacagccaggagcccagcagc
tttggctgcctggtccgaaagactccaaactgtgcctgctacgtcttccagtgccaggac
aagaccaaggtccctgagatcatcagtacgttgaggcaggccggcaagagctctgcacgc
aacaatgatatcgtcaccgtttccaagaaaccgtccaccggaggcagtgattcctcagat
tcatcttcttctcatctctccacatcgtcaacctccgcagcaccaactgtagtcgtgtct
ccgacagcttttgccaaaaagtttgaggtgctattttgtggccgtgtgagcgttgctcac
aggaaagctccacccgcacttatcgatgagtgcatcgagaaattcagccagttacatggc
tcagggacaaccgataaaggagaaaatggtgggaggttggtgggtgggctgaggagggca
ttaaacttccaatccaatggactggggagtggtgctgttggtaatggcgctactgggagc
cccactactggcaagcggcctgtcttgttcaagcaagacctcagctttcccagtctacag
ggcctggatgagaacggactctcacctgagatttctctcaccaacactactgatgcactt
acacgctccgctgaagtacagcccaccagcctgcaggagaacaggaccatgctgttcatg
gttggcaggtctcagatcttcttggtcagtccggacactaagaaagttgccatagagaag
ggtttcagagaaatctccttctgctcacagggtattcgtcacgtggatcactttggcttc
atttgcagagagacggtggaaggagggagctgccattttgtttgctatgtcttccagtgt
acagacgaatcactggtggatgagatcatgctgactttgaagcaggcgttctctgtggca
gccctgcagcagagtgcaaagacccagagccagcagtgtgacagttgccccatgcagcag
ctccacaggctctgtgagaggatagaaggtctacaaccatcaaaaaccaagctggagctt
cagagacatctggcctctctggacaatcaggagcaagcattggtgtttgaaaacactatg
agggctcgtcctaagagcgatcaggaagagaatgagttggtgatggcctggctgaggaat
ctgtatgaggagaaacagaagagccatcagcacacactgcctggagacagcagcaaacaa
gtgtgtgaggaggcagctccagctcctgtgcaggcgcagcagcagagtagcagccggcag
cgacttgaacagttcaagagccgagccaagcgctctctcactgagtccctggagggcatc
tggaaggggagcagcaaggccaggattagcagggacaacagtgaaggaagtgacagtagc
tcctccatctttactttcaacagcagccaggaacagctctgcttagatgaccccttatcg
tcctcctccacgctaccacccaccagcccactcaggtgccacaactcaacaggggacctg
aagcaccttgacacctctctccgtgtgtctccctcctcctcctctctacctggtgatgag
cagccgcagggcttccgtcgacgggccagcaccttcagccaccctccaaccccctcctca
ggattcgagaactcaccggtgcacacactaaatcacactccacaggacgccaccgccgct
accaagcccaagctcgtacgacactactctgtcagcactgacacgccacaccaaagcaaa
catgcctcaaccaactccacccttcctcctgttgctccctgcacatcatcctcctctgct
ctgctccctcatcacccttcctccccttcttctggagcccggctcattaagagaagccct
ttggttggtcttcgtgctcgtctccactcctcctcctctgtccctaactttctgaaattt
ccatttctggcccctgtccaagagaatgattgtcctcagccaaagagcagtgacgttgca
gctctctctacaccaaccgcagcgtgcggggtgggggaaagccctctgcgacaccgccac
tcatggaggcagcagatctttctacgggtcgccacacctcagaaaaacacagaccccaac
gagcggggggactcctgtcacgatggtggtcgagtgtgcatgggcccggggggagttgga
ggaagtggcgacttgtccatgagagcggtgcctgaggagaggacgaagaggagcaaagag
gagctcagggatctgtggacgaaggccatcctgcagcaaatcctgctgcagaggatggag
agagagaaccagaaactgcaggccaccgagagcgacctgcagaacaagcgtctgaagctg
gactacgaggagatcactccatgtctgaaggaggtcactctggtgtgggagaagatgatg
ggaactcctggtagagcaagggtcaaatttgacacagagaccatacatgctgctgttgca
cacggagtcccgaggatgcatcgaggcgagatctggaagtttctctccgagcagtatctg
ctcaggcagacggtgccctcccgaccccccgccaaccccactccatacaaagagctgctg
aaacagctcacgtcgcagcaacacgccatcctcatagacctgggtcgcacttttcccact
catccatatttccaagcccagctgggggcaggacagctgtctctgtacaacatactgaaa
gcctactcactgctggaccctgaggtgggctactgccagggcctgtccttcatagctgga
gtcctgctgttacacatggaggaggaggacgccttcaacatgctcaaatttctgatgtat
gatgtcgggcttcgtaaacagtacaggcctgacatgattgtcctgcagattcagatgtac
cagttgtcgcggctgctccatgactaccacagggatctctacaaccacctggagcagcaa
gaaatcgggcccagcttatacgccaccccctggttcctcactgccttcgcctcgcatttc
cccctcggctttgtggcgagagtcttcgacatgttgttcctgcaggggtcagaggtcatc
ttcaaggtggccatgagtctgctgaggagccacaaacctctgatccttcagcacgacagc
ctggagtccattgtggacttcatcaagaccacgctgcccaacctgggcctggtgcagatg
gagaaaaccatcaaccaggtttgtgagatggacgtgtcgaagcagctccaggcctatgag
gtggagtaccacgtcctgcaggacgagctgctggacacgcccccgactctcaaccagcac
cagcgagctgcgcagctggagaggaccaatcagagcctccgacagcagaacctcgacctg
ctggaggagcttcaggtgtctcatgctcacgtgcacagcctcgagagccgagtggaggag
tttgtccagtcggagggtcgactgacggagcaagtctgtgcactggaggaggagaagaag
cagctgctgagcacggtcacgcacctccaggacctcctcaccagcctgggcatacaaagc
tcccttgatggacacgcaacccccccagctgctgaaagacacgcagcctcagcagcagca
gcaacgaccaaccagactgtggaatcacttctccacctgttggctcttccagagagttca
tga
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