Hippoglossus stenolepis (Pacific halibut): 118100593
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Entry
118100593 CDS
T08308
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118100593 (trim65)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118100593 (trim65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
Prok-RING_4
zf-RING_11
zf-Nse
zf-RING_10
zf-ANAPC11
MLLE
Ribosomal_S2
U-box
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
118100593
NCBI-ProteinID:
XP_035001772
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Position
21:complement(4757229..4765360)
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AA seq
513 aa
AA seq
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MESQNSSLNCAICLERFQFPVTIPCGHTFCKKCITTHWDTKSKANIGPQCPMCNKEFNTR
PILKRNVSLSVLTEAANSGGPSCRESPMRGHEGVRAMLLCDRHKKPLVYYCRQDKMSVCC
ECGIAECAAHEKVLLETERENQEMLLEMKNKEVGKLIEETQNCIKDLTEHIDQAKVTLEQ
TSTWVNAKFSTLMKILAEKQEATELFIDEQREATITEAEARLAELEEHSHRLKESQDQIA
AVNNLSDTELIKESMLLEVPRLKVIPTDVTPNLQDRLNCVTDILSRVSKLVSEDLDKAVS
TAVAQDKDGSPQDKRPVGAVVPSPAAPCHPGGNEGLSAYRCSLTFDPRTANGHLFLSQEN
RRAEHLTSGPRPVPVHESRFDYTWQVLCFQGFTHGQHYWELEVSKPWAYLGVTYEAIPRK
EKGKRCMVGMNELSWSLQLDEHQLSAWHNSRKEILVGHSQHRRIGMLLDYEAGTLTYYGD
GQTRLHAFHCAFTRELFPACWIGEGVSITLCST
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcagaactcaagcctaaactgtgccatatgcctggagcgtttccaattccct
gtgaccatcccctgcggacacaccttctgtaagaagtgcataaccacccactgggacacc
aaaagcaaggccaacatcggacctcagtgccccatgtgcaacaaggagtttaacaccagg
cccatcctcaagcgtaacgtgtccctgtcggtcctgactgaggctgcgaacagtggcggc
ccgtcctgcagggagtcacccatgaggggacacgaaggggtcagagccatgctgctgtgt
gatcgccataaaaagcctctggtttattattgcaggcaggataaaatgtctgtgtgctgc
gagtgtggtatcgcagaatgtgcggcccatgagaaggtcttgttggagacagaaagggaa
aatcaagagatgctgctggagatgaagaataaggaagtggggaaactcatcgaagagaca
cagaactgtataaaggacttgactgagcacatcgatcaagcaaaggtgactcttgaacag
acttcgacctgggtcaatgccaagttctccaccctgatgaaaatcctggctgagaagcag
gaggccacagagctctttatcgatgagcagagagaggccaccatcaccgaggcggaggcg
cggttggctgaactggaggagcattcccacagactcaaagagagccaggaccagatagca
gctgtaaacaacctctctgatacggagctcatcaaggaatccatgcttctagaagttcca
cgtttgaaggtcatccccacagatgtaacacccaaccttcaagatcgcttaaactgcgtc
accgacatcctgtcccgcgtctccaagctggtgtctgaggacctggacaaagcagtgagc
accgcagtggctcaggacaaagatggttctcctcaggataagaggcctgtcggagctgtg
gttcccagtccagctgctccgtgccaccctggtgggaatgagggcctcagcgcgtaccga
tgctctctgacctttgacccccgcacggccaacgggcacctgtttctgtctcaggagaac
cggagggcggagcacctgacgtctgggccccggcccgtgccggttcacgagtcccgcttt
gattacacctggcaggtgctctgctttcagggcttcacccacgggcagcactactgggaa
ctggaggtgtccaagccctgggcctacctcggggtgacatacgaggccatccccaggaag
gagaaaggcaagcggtgcatggtgggtatgaacgaactttcctggagcctgcagctggac
gagcatcagctcagcgcctggcacaacagccggaaggagatcctggtgggccactcgcag
cacaggcgcatcggcatgctgctggattacgaggcagggacgctcacctactacggggac
ggtcagaccaggctgcacgccttccactgtgccttcaccagggagctgttccccgcctgc
tggataggagagggggtcagcatcaccctgtgctccacatga
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