Hippoglossus stenolepis (Pacific halibut): 118100624
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Entry
118100624 CDS
T08308
Name
(RefSeq) caskin-2 isoform X1
KO
K21952
CASK-interacting protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118100624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118100624
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
118100624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Caskin-Pro-rich
Caskin-tail
Ank_4
SAM_2
Ank_5
Ank_3
Ank_KRIT1
Caskin1-CID
SH3_2
SAM_TNK
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
118100624
NCBI-ProteinID:
XP_035001819
LinkDB
All DBs
Position
21:complement(3156136..3208770)
Genome browser
AA seq
1580 aa
AA seq
DB search
MGKEQDLLVAVKSGDLLLAHKLLSKVKCNKTKLLGSTKRLNINYQDSDGFSALHHAALTG
TTELLSLLLEAQATVDIKDINGMRPLHYAAWQGKADSVLLLLRANASVNSSSHDGQIPLH
LSAQYGHYEVSEMLLQHQSNPCMTNKAKKTPLDLACEFGRLKVTQLLLSSNMVTALLEGD
GGLDSLDSPSTTPLHLAARNGHKDIIKLLLKAGIDINRSTKAGTSLHEASLYGKTEVVRL
LLDAGINVNMRNTYNQTALDIVNQFTTSTASREIKQLLREASSSLQVRAVKDYWNLHDPT
ALNLRAGELIMVVEQHADGRWKGHVHDTQRGTDRVGFFPPSVVEVLSRRAGGTLSRQASL
PCHRQHFASRAPPSSHGSTPQSDDSFTLGYDPAGVPPGSPASPTQDIWVLRSSPTGDRHS
VGSAGSVGSSRSAGSGQSSESSHKQNGTRHNADTGKLTPSAGESGDHIHIAGADRSKQAD
GSAGGSRRQVNGTPQKGFVRPEHLLEGKDSEAIYQWLCEFQLEHYTSNFISSGYDVPTIS
RMTPEDLTAIGVTKPGHRKKISTEIGKLSIPEWLPDYIPSDLGEWLSVIGLPQYQKRLCD
NGYDSITIVKDITWEDLQEIGITKLGHQKKLMLAVKRLSDLQRSRNNADRTGGGTLRRKP
PGALELVAIEHPPMHNVHAHIRSDAPSDTCCSSPRTPRALLSFQDSELSAELQSAMMGRA
GGGAAEAFGIRGVSSAAAMTAMSVSQESISMRSRGSGNSGNSGNSGHSGHSGHSGNSGTS
GHSHEHHTTPSSARTASRSEESLESGGGEEAKRGGSSPGSRGRQRPTEMWDHQSRSATPN
KLPFSPLTPPLTPSKMPRFAHPAVPPKTKHVQSNRLYQPQHQPSSSPSSPSPQPSPTQKA
FSYLQALAGGVSAAPQGLSKPLPGAVPVLGPRPGQVQADGIQRGPHKKRAQSLTRYALSD
GEPDDDDDLALSSSTASSVAMPSYATLSRRPGRGHTSTTGAQRHINRSHSFAVRSRHKGP
PPPPPKRMSSVSGSPPSQPGNWKAVEPEVMGGVEIESVGSVRSIAARLEGSSSGSSSPSR
RIDIPPTHIPITPVFSPVSSPIPSHIILQHPKHVPALGLSGLRRTGSERAEGDSDRQRSR
TTEGTPEEKERDRNSDRISKSANASPKRSSGDHLPFAEEGNLTIKQRPRIALVPQADADL
KTPPEDPLHSPNGLEVPEFNLKESDTVKRRHKNRDKDASTPEEASTPNRGDLRTLSDEEP
PRSIFQRVGSMGKDPKPPGDLRTLNDEEPPRSIFQRVGSMGKGPKPPGDLRTLSDEEPPR
SVFQRVGSMGKGPTPPGDLRTLSDEEPPRSVFQRVGSMGKGPKPPVFSKPSSPLKQAANS
RPTTPLTPASPLRASAQTASAQTAIPKLTSIQIHTVSPKLGGSIHTHTCIPSSKAGKPPQ
MMGSKPESPQKAAGVCASPLRLPQHSTASPSSAGTNFSMGHSVAFVAPSSPSYSASALPG
LIGRAGAAQPGVAGLELLAQKRLEQTSTSLEAALKVVENKLAQGSSVESGSGTVKAAGNI
LDDISNMFDDLADQLDAMLE
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaacaggatctgctggtggcagtgaagagcggggatctcctgctggctcac
aagcttctctccaaagtcaagtgcaacaaaaccaagttgctgggctcgaccaagaggctg
aacatcaactaccaggactcagacggcttctccgccctgcaccatgccgctctgacggga
accacggagctgctgtccctgctgctggaggcccaggccacggtggacatcaaggacatc
aacggcatgcgtcccctccactatgcagcatggcagggtaaagccgactctgtcttattg
ttgctaagagccaacgcttcagtcaactcctcttcccatgatggacagataccgttacat
ctctccgctcagtatggacattatgaggtgtctgagatgttgctgcagcatcagtccaac
ccctgcatgacgaacaaggcgaagaagactcctctagatctggcctgtgagtttgggaga
ctgaaggtgactcagttgctgctgagcagtaacatggtgacggcgctgctagaaggggac
ggagggctcgacagcctcgactctccatccaccacccccctccacctggcagccaggaat
ggacacaaagacatcatcaagttgctgctgaaagctggtattgacatcaacagatccacc
aaagcggggacatctctgcatgaagcttccctctatggcaaaactgaagttgtgcgtctg
ctgcttgatgctggcatcaacgtgaacatgcgcaacacctacaaccagacagctctggac
attgtcaaccagttcaccacttccacagccagcagggaaatcaaacagctgctcagagag
gcatcaagttctctacaggtcagggcggtgaaggattactggaacctccacgaccccacg
gctcttaacctccgggctggagagctcattatggtcgtggagcagcacgcagacggccgg
tggaaaggtcacgtccatgacacgcagcgggggacggaccgggtgggcttcttcccgccc
tcagtggtggaggtcctcagcagacgagcagggggcactctctcccgtcaagcatcactg
ccttgccaccgacaacactttgcgtccagagctccgccctcaagccatggctccacccct
cagtctgacgactcattcacccttggctatgatccagcaggtgtgccacctggcagtcct
gctagccccactcaggacatttgggtcctcaggagctcccccactggtgacagacacagt
gtcggcagtgcgggcagtgtgggcagcagtcgcagcgccggtagtggccaaagctcggaa
agcagccacaaacagaacgggactcgccacaacgctgacactggcaagctgactccctct
gctggtgaatcaggagaccacatccacattgcaggagcagatcgcagcaaacaggctgat
ggatccgcaggtggctcccgccggcaggtcaatggcactcctcagaaaggcttcgtacga
ccagaacaccttctggagggcaaggactctgaggccatctaccagtggttgtgcgagttc
cagttggagcactacacatccaatttcatcagctcaggatatgatgtgcccaccatcagc
aggatgaccccagaggacctgacagccatcggagtgaccaaacctggccacagaaagaag
atctctacggagattggaaagctcagtatccctgagtggctgcctgattacattccttcg
gacctgggggagtggctgagtgttattggacttcctcaataccagaagagattgtgcgac
aacggctatgactccatcactattgtcaaagacatcacctgggaggacctgcaggagata
ggcatcaccaaactaggtcatcagaagaagctcatgttggcagtgaagagactttctgac
cttcagcgctctcgtaacaatgctgacagaaccggaggtggcactctcagacggaagccc
cccggcgctctggagctggtggctatcgaacaccctccaatgcacaacgtgcacgctcac
atacgctctgatgccccgtctgacacctgctgctcctcccctcgcacccccagggccctc
ctctccttccaggacagcgagctgagcgctgagctgcagagcgccatgatgggcagggcg
ggtggaggagccgcagaagcattcggcatcaggggtgtgagctccgcagcagccatgacg
gccatgtccgtgagtcaggagagcattagtatgcggtcacgtggctcagggaattctggg
aattctgggaattctgggcactctgggcactctgggcattctgggaattctggaacttct
ggacattctcatgagcaccataccacgccgtcatcagccagaacagccagtcggtctgag
gagagtctggagagtggaggaggcgaggaggccaagcgaggaggaagtagtcctggaagc
agaggtagacagagacccacggagatgtgggatcaccagagtcggtctgcgactcccaac
aaactccccttctcacctctcacacctccgctgacccctagcaaaatgcctcgctttgcc
cacccagctgttccacccaagaccaaacacgtccagtctaaccgcctctatcagccccag
caccagccgtcctcctcaccatcctctccatctccacagccgtcccccacacagaaggcc
ttcagttacctgcaggctctggcaggaggcgtcagcgcggctccacagggcctctcaaag
cctctgcctggggccgtccccgtgctggggccccggcctggacaggtccaagctgatggc
atccagaggggcccgcacaagaaacgcgcccaaagcctaacacgctacgccctgtccgat
ggcgagccagatgacgacgacgaccttgctctgtctagctcaactgcttcctctgtagcc
atgccttcctacgccacattgtcccgcaggccaggacgcgggcacaccagcactacgggg
gcccaacggcacatcaaccgcagccattctttcgccgtgcgctcccgacacaaaggcccg
cccccgccgccaccgaagaggatgagctcggtaagcggcagcccaccgagccaaccagga
aactggaaagcggtggagccagaggtgatgggaggcgtggagattgagagcgttggcagc
gtgaggagcatcgcagccaggctagaaggaagcagcagcggcagcagcagtccatcgagg
aggatagacattccaccgacccacatccccatcacccctgttttcagccctgtttcctct
ccgattccttcccacatcatcctacagcacccaaaacatgtccccgccttgggcctaagt
ggcttaaggaggacaggaagtgagagggcagaaggagactctgacagacaaagaagcaga
actacagagggaacacctgaagagaaagagagagacagaaatagcgatagaatatcaaag
agtgctaatgcgtctccaaagcgcagctcaggtgaccatctgcctttcgctgaggagggt
aacctgaccatcaaacagcgacccaggatcgcacttgtcccccaggcagacgctgatctt
aagactcctcctgaggatccgctccacagcccaaacggcctggaggtccccgagttcaac
ctgaaggagtctgacacagtgaaaagacggcacaaaaacagagacaaagacgcatccacg
ccagaggaggcttccactcccaacagaggtgacctgaggacgctgagcgatgaagaacct
ccgagaagcattttccagagagttggctccatgggaaaagacccgaagcctccaggtgac
ctgaggacgctgaacgatgaagaacctccgagaagcattttccagagagttggctccatg
ggaaaaggcccgaagcctccaggtgacctgaggacgctgagcgatgaagaacctccgaga
agcgttttccagagagttggctccatgggaaaaggcccgacgcctccaggtgacctgagg
acgctgagcgatgaagaacctccgagaagcgttttccagagagttggctccatgggaaaa
ggcccgaagcctccagtgttttctaaaccttccagtcctctgaaacaagccgctaacagc
agaccaaccaccccactgacaccagcctctccactacgagccagcgcacaaacagccagc
gcacaaacagccattcctaaactaaccagcatacagattcatacagtctcaccgaagctg
ggtggcagcatacacacacacacctgtatacccagttctaaagctgggaaacctcctcag
atgatggggtccaagcctgagagtccacagaaagctgctggtgtgtgtgcatctcctctg
agactccctcagcacagcacggcctcgccatcatcagcaggaacgaacttcagtatgggc
catagtgtcgcgttcgtcgctccatcctccccctcgtactccgcctcggcactaccgggc
ctgatcgggagagcaggagcggctcagcccggcgtggccggtctggagctgctggctcag
aagaggctggagcagaccagcacgtcactggaggctgctctcaaagtggtggagaacaaa
ctggcacaggggagcagtgtggagagcggcagtggcaccgtgaaggcagcaggaaatatc
ctggacgacatcagcaacatgtttgacgacctggccgaccagctggacgccatgttggag
tga
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