Hippoglossus stenolepis (Pacific halibut): 118100629
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Entry
118100629 CDS
T08308
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04136
Autophagy - other
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118100629
04136 Autophagy - other
118100629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118100629
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118100629
Membrane trafficking [BR:
hsp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118100629
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118100629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
EIF3I
Beta-prop_RSE1_2nd
CPSF_A
BCAS3_WD40
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
118100629
NCBI-ProteinID:
XP_035001830
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Position
21:complement(8587524..8595733)
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AA seq
443 aa
AA seq
DB search
METQDLPEGPAADRGFICASFNQDTTSLSVGTKTGYQLFSVTAVDKLDCIHEGVECSEVY
IVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNDILSVRLNRQRLVVCLEESI
YIHNIKDMKLLKTLLNTPINPSGLCALSINHSNSYLAYPGSATIGEITIYDANNLSTVTL
IQAHDSPLAALTFNPSGTKLASASEKGTVIRVFGIPEGQRLYEFRRGMKRYVSISSLSFS
ADAQFLCASSNTETVHIFKLEQHSPSQDEESPTWSAYMGKMFTAASTYLPAQVSDMMHQD
RAFATVRLNMFGLKNICALATIQKLPRLLVASSDGFLYIYNVDPQDGGDCVLVQRHRLFD
SGEEQVEQSEEDKTEDVPPQPASQSYAATVALPSTPPSATTLMGYSEDGGAQKGDVIPEH
EFAESPVCLDDENEFPPVGNQSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagacccaggacctgccggagggccccgcggcggaccgaggcttcatctgcgcctcc
ttcaaccaggacaccacttctctgtctgtgggcaccaagacgggctaccagctcttctca
gtcactgctgtggacaaactagattgcatccatgagggagtcgaatgttcggaggtgtat
atagtggagcggctgttttccagcagtctggtggtggtggtcagcctgtccatgccgcgg
cgaatgaacgtctaccacttcaagaagggcacagagatatgcaactacagctactccaat
gacatcctgtccgtcaggctcaacagacagcggctggtggtgtgcctggaggaatccatc
tacatccacaatatcaaagacatgaaactactcaagaccctgctcaacacacccatcaac
ccctcgggtctctgcgctctttccatcaaccacagtaactcctacctggcgtaccctggc
agtgccaccatcggggagatcacgatatatgatgccaacaacctgagcactgtgacgctg
attcaggcccacgacagtcccttggccgccctcaccttcaacccctctggaaccaaactg
gccagcgcctcagagaagggtactgttattagagtctttggcattcctgaaggacagaga
ctgtatgaattccggcgagggatgaagaggtatgtcagtatcagttccttgtccttcagt
gccgatgcccagttcttgtgcgcctccagcaacactgagacggttcatatctttaaactg
gagcagcacagcccgagtcaagatgaggagtctcctacatggtcagcgtatatgggtaaa
atgttcacagcagccagcacctatttgcccgctcaggtgtccgacatgatgcatcaggac
agagcctttgcgactgtacgcctcaacatgttcggcctaaagaacatctgcgccctggcc
acgattcagaagctccctcgcctgctggtggcgtcctcggacggatttctctacatctat
aatgtggatccacaggacggaggcgattgtgtccttgtccaaagacacaggctgtttgac
tccggcgaggagcaggtggaacagagcgaagaggacaaaacggaggatgtccctccccaa
ccagccagccaatcatacgctgccactgtggcactcccttcaaccccaccctccgccacc
actctcatgggttactctgaagatggtggagcccagaaaggcgacgtcatcccggagcat
gaattcgccgagagccccgtctgtctggatgatgagaatgagtttcccccagtcggcaac
cagagtaactga
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