Hippoglossus stenolepis (Pacific halibut): 118100716
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Entry
118100716 CDS
T08308
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118100716 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118100716 (abca5)
Transporters [BR:
hsp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
118100716 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
RsgA_GTPase
AAA_29
AAA_23
R1_ABCA1
MMR_HSR1
Bac_rhamnosid_N
Motif
Other DBs
NCBI-GeneID:
118100716
NCBI-ProteinID:
XP_047194208
LinkDB
All DBs
Position
21:complement(19581568..19597638)
Genome browser
AA seq
1526 aa
AA seq
DB search
MFYIPEASIRQSSRAHVIQMRHAGSMQPMYRRDAGVWHQTRSLLYKNLLIKWRTKQQSLQ
ELILPLLLLGLLILISTLNPHVYYGGISTMELEREDHFFKGLGYTPITNITTHIMEEVAH
QMLLQNNLDMFASEEELENASLYEPSSYVGVVFMDSSATSYRLRFPYNQLPLPSDYTESI
ANCFTSSVNCRAANYWYSGFIRLQSLIDAAIIQMQTKRAVGSEMELKVVMMGQPGSVEVQ
KFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYNTAFWLSWGLLYAALV
TTMSFLMSIIATYTALFPNSDFLVIFGLIFLYGISSIFFSFMLTPLFKKPKFASTVGSML
TVVFGCLSLFTVLMKDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLTNGPH
PLYVPLVMLVLDCILYLLLAVYLDQVLPGEYGIRRSLVYFLKPSYWSKRTKRYVEVSSVY
DAEVNGAPGVDEAVEPISPEFRGKEAIRINNIHKVYKEKDNVVEALRGLTFDIYEGQITA
LLGHSGAGKSTLMNILCGICPPTNGSATIYGSPVAEIADGSEMKQLVGICPQFNIIFDVL
TVEEHLRIFAAIKGIRPADIDAEVNKVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIAILG
DPKILLLDEPTAGMDPCSRHQVWSLLKNRRAGRVTVLSTHYMDEADILADRKAVISQGQL
KCVGSSMYLKIKCGVGYHLRMSVNEGCEAENITSLVKQKVPKATLSQQHEAELTFTLPFE
SMDTFSGLFSELDSQPNLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNREQAEDDC
DTNASLDDTDQRLLTFSDNKSDVVSGHALWRQQFSTVAWLHMLNMHRERKAFIYTLALFL
VFVAAVLVLSLATGNIQIHSPDRQFLPIYLLKRNQLPRRYTTSLLVQNSSDSDISDFVHN
LESQNIKVEMMKHSDYMSAAPHSAAINVTGSNKGFKYSVAFNSTTVHSLPMAVNVLSNAL
LRGLNGTRPIRTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTRDREIKC
RSTLRISGLVPSAYWCGQAAVDIPFYYLILSFMTIILFSFHTGNLLTSSNLMAVVLCIVG
FGPAMILFTYVSSFGFARVQSNRDFFSVISMMVCVVSASLVQLSYVNGNLELTRNLHNIL
CFFNPLYPLMGCLNCITRATFLPLPYEKNFLWKNLLIAVVAPYLQVILLLFLLRWLEIRH
GGRTMKNDQYCRISSKSKPKVEKNPEEGQNEDEDVQMEKARVKEALTCQSCEEKPAVVVS
NLRKQYKGRREGFSLNKTRKLATKNVSFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTDPT
AGQVLMGDYSTEFRPVDNPLEHVGYCPQVNPLWPRITLQEHLEIYAAVKGLRGQDVPGII
KGGECSGAEGPLEQTSQEPVSRTQEEVVLCFEHDRESSDRFTGRAVVGDGPQVEAAHVES
HTSCFQEPPARSHPHHALHGGGRGRV
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgttttacatcccggaggccagcattaggcagagttctcgtgcgcacgtcattcagatg
aggcatgctggaagtatgcagcccatgtatagaagagatgctggagtctggcaccaaaca
agaagtcttctctacaagaatctgctcatcaagtggaggaccaaacaacagagtctgcag
gaattgattttacctttactactcttggggctgctgatactcatcagtaccctcaatcct
cacgtttactatggaggcatcagcaccatggagctggagcgggaggaccacttcttcaag
ggcctgggctacacaccaatcaccaacatcaccacccacatcatggaggaagtggcccat
cagatgctcttgcagaataatctggatatgtttgctagcgaggaggagctggagaacgcc
agcctgtacgagccttccagctacgttggtgtcgtgttcatggacagctctgccacatct
tacagactgcgcttcccgtacaaccagctgcctctgcccagcgattacacagaatctatt
gcaaactgtttcaccagctcagtgaactgcagagcagctaactactggtactcgggcttc
atccgcctccagtccctgatcgacgcagccatcatccagatgcagacgaagcgggccgtg
gggagtgagatggagctgaaggtggtcatgatgggtcaaccgggttctgtggaggtgcag
aagttcccccacgccctcatctccatatacctggtcctggccttcacacccttcgtcacc
ttcctcatcgtcaacgtggccgctgagaaggaacaccggctcaaagacaccatgaccatg
atgggactctacaacacagccttctggctgtcgtggggcctcctgtacgctgctctggtg
accacaatgtccttcctgatgtccatcatcgctacgtacacggcgctgttccctaacagc
gacttcttagttattttcggcctcatcttcctctatggaatatcatctatctttttctcc
ttcatgctgactccgttatttaagaagcctaagtttgccagcaccgtgggctccatgctg
acggtggtgttcggctgcctgtcgctcttcaccgtgctgatgaaggacttccctcagccg
ttggtgtggctcctctgcctgctctcccccagcgccttttcaattggcatcgcacaggtg
gtttacctggaggctcagggagacggagctgtgttttcatccttgaccaacgggcctcat
cctctgtacgtgcccctggtcatgctggttctggactgcatcctctatcttctgctggct
gtctacctggaccaggttctgcctggtgagtatggaatcaggaggtccctggtgtacttc
ctgaaaccgtcctattggtccaaacgcacaaagcgctacgttgaagtgagctcggtttac
gacgcggaggtgaacggcgctcctggtgtggacgaggctgtcgagcctatttcacctgag
ttcagagggaaagaagccattcgcatcaataacatccataaagtgtataaagagaaggac
aacgtggtggaggctctgagaggtttgacgtttgacatctacgagggccagataacggct
ctactgggacacagcggggctggaaagtccactctcatgaacatcctgtgtggtatctgc
ccccccaccaacggctcggccaccatctacgggtccccggtcgcagagatcgcagacggg
tccgaaatgaagcagctggtggggatctgcccccagttcaacatcatctttgacgtgctg
acggtggaggagcacctcaggatattcgctgcgatcaaagggatccgacctgccgacatc
gacgcagaggttaacaaagttctgaaggatctggacttggagaagatcatgactgctcag
gccaagaatctgagtggaggccaaaagaggaagctgtctgtgggcatcgccatcctcgga
gatcccaagatcctgctcctggatgagcccacggccggcatggacccgtgctccagacac
caggtgtggtcgctgctgaagaaccggcgagctggcagagtcacggtcctgagcacacac
tacatggacgaggcagacattctcgctgatcgcaaagctgtgatctctcaggggcaactg
aagtgtgtcggctcctccatgtatctgaagatcaagtgtggggttggatatcatctcaga
atgtctgtcaatgagggatgtgaagctgaaaacatcacgtcattggtcaagcagaaggtt
cccaaggcgacgttgtcccagcaacatgaagcagagttgaccttcactcttccctttgag
agcatggacacgttttcaggtttgttctctgagctcgactctcaacccaatctgggaatc
atcaactatggggtttccatgacaacactggaggatgttttccttcgtctggaggccgag
gctgaagtggaccaagctgattacagtgtgtttaatcgggagcaggccgaggacgactgt
gacaccaacgcctctctggacgacacagaccagcggctgctcacgttctcggacaacaag
tcggatgttgtgtcgggtcacgctctgtggcggcagcagttcagcaccgtggcctggctg
cacatgctcaacatgcacagagagaggaaggccttcatttacactctggccttgttcctg
gtgtttgttgctgcggtgctcgtcctgtctctggccactggaaacatccagatccactca
ccagatcgtcagtttcttcccatttacctcctcaagaggaaccagttgcctcggagatac
accaccagcctcctggttcagaactcctctgactctgatatttctgacttcgtccacaac
ctggagtctcagaacataaaagtggaaatgatgaaacacagtgactacatgtccgcggct
ccccacagcgccgccatcaacgtgacgggatccaacaaggggttcaaatacagcgttgcg
ttcaacagcaccacagtccactccttgcccatggctgtcaatgtgctgagcaacgcactc
ctccggggcctgaacggaaccaggcccatccgaacctggaccaagccgtttgattatcaa
atccccgatgccacgtcctacgctctggtgtacattgaggccatcatactgggaatgctg
gcagctggaatgcctgcgtatttcgcaatggaccacactcgagaccgagagatcaagtgt
cgctcaactctgcgaatctctggtctggtaccatcagcgtactggtgcggccaggcggcg
gtggacatccccttctactacctcatcctgtccttcatgaccatcatcctcttctccttc
cacactggaaacctgctcacctccagcaacctcatggctgtggtcctgtgtatcgttggc
ttcggtccggccatgatcctcttcacctacgtgtcttctttcggcttcgcccgagtccag
agcaacagggatttcttctctgtcatctccatgatggtgtgtgtcgtatcagcctcgttg
gttcagttgtcgtatgtgaacggcaacctggaactgaccagaaacctgcacaacatcctg
tgcttcttcaaccctctgtaccctctcatgggctgcctcaactgcatcactagggcgacg
ttccttcctcttccctacgagaagaacttcttgtggaagaacctgctcattgcggttgta
gctccttatctccaggtcatcctgctgcttttcctgctccgctggctggagatccgtcac
ggaggcaggacgatgaagaatgatcagtactgcaggatctcgtccaagtcgaagcccaaa
gtggagaagaacccagaagaaggtcagaatgaggacgaggacgttcagatggagaaggcc
cgagtgaaggaggctctcacctgtcagtcctgtgaggagaaaccagctgtggtggtgagt
aacctgaggaaacagtacaaaggcagaagagaagggttttctctcaacaagaccaggaag
ttggccacaaagaacgtctccttctgcgttcgaaaaggggaggttcttggcctgttgggc
cccaacggagcaggaaagagcaccatcatgcacatgttgtcaggggacactgacccaact
gccggccaggtgctgatgggggactacagcactgagttccgtcccgtggacaatcctctg
gagcacgtgggctactgtccccaggtgaaccctctgtggccgaggatcactctgcaggag
cacctggagatctacgctgccgtcaagggcctgaggggacaggacgtgccggggatcatc
aagggtggtgaatgctctggagctgaaggaccacttgaacaaacaagccaagagcctgtc
agcaggactcaagaggaagttgtgctttgctttgagcatgatcgggaatcctcagatcgt
tttactggacgagccgtcgtcggggatggaccccaagtcgaagcagcgcatgtggagagc
catacgagctgctttcaagaaccgccagcgaggagccatcctcaccacgcactacatgga
ggaggccgaggccgtgtgtga
DBGET
integrated database retrieval system
