Hippoglossus stenolepis (Pacific halibut): 118100913
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Entry
118100913 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase beta-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118100913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118100913
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
118100913
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
118100913
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_central
PAP_NTPase
PAP_RNA-bind
Nrap_D2
YLL032C_C
Motif
Other DBs
NCBI-GeneID:
118100913
NCBI-ProteinID:
XP_047194380
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All DBs
Position
21:6895591..6900946
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AA seq
369 aa
AA seq
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MSGRERLFACEVMVGLLVAEDEGMRINKNNTDDKADKCADIDALCVGPVFLDRTVFFTSF
FEKIKAQEEAKDIQLAYXSIIASFIIIMQVKVYFSPVQVDLVYAQMPRRSLSDTLNLLDD
MWMKDMDKASARSLNGYRVTEEILRLVPNVSNFRLALIAIKLWAKRRNIYSSELGFLGGV
SWAILVARIFQVNPNMTASSLVMKFFRVYSMWEWPIPIRLRVVQDLHYNLPFWDSMYNRR
DQYHLMPILTPAYPQQNSAFNVSLSSLTILIEEFNWGMYSHPADNHHMVTTCNARQTTIN
SRVLTVDQRDYLQVEATSATEEQHLDWVGLVESRIRHLVGALQIHQCITLAHGGSEHKVG
DWIYPDRGV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagggagcgcttgtttgcctgcgaagtgatggtggggctgctggtggctgag
gatgaggggatgcgaataaataaaaacaacaccgatgataaggctgacaaatgtgctgat
attgatgctctttgtgttgggcctgtatttctggacagaacggtcttcttcacctccttc
tttgagaagatcaaagcccaggaggaggccaaagacatacagttggcatattaatcaatt
attgcatcttttatcattatcatgcaagtcaaagtctatttttccccagtgcaagttgat
ttagtctatgcccagatgccacggaggtctctcagtgacacactcaaccttcttgacgac
atgtggatgaaggacatggataaagcctccgccaggagtctcaatggttacagagtcaca
gaggaaatcctccgtcttgtgccgaacgtctcaaacttcaggctcgctctgatagccatc
aagctgtgggccaaaagacgcaacatttactctagtgagctgggcttcttgggcggggta
tcctgggccattctggtagccagaattttccaggttaatccaaacatgacagcatccagc
ctggtgatgaagttcttcagggtctactccatgtgggagtggcctatccctattcgtctg
agggtagtgcaggacctccactacaaccttcccttctgggattccatgtataacagacgt
gatcagtaccacttgatgccgatcctcacgccggcatacccccagcagaactcagcgttc
aatgtgtctctctcctcgctgaccatcctgatcgaagagttcaattggggtatgtatagt
cacccagctgacaaccatcacatggtcactacctgcaatgcgaggcaaacaaccatcaat
tcccgtgttctaaccgtggatcaaagggattaccttcaggtggaagcaacttctgctaca
gaggagcagcatcttgattgggtgggcctggtggagtccaggatcagacacctggtggga
gctctgcagatacatcagtgcattaccttggctcatggagggtctgagcacaaagtgggt
gattggatttaccctgacagaggagtataa
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