KEGG   Hippoglossus stenolepis (Pacific halibut): 118100966
Entry
118100966         CDS       T08308                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04137  Mitophagy - animal
hsp04144  Endocytosis
hsp04145  Phagosome
hsp04148  Efferocytosis
hsp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118100966
   04145 Phagosome
    118100966
   04137 Mitophagy - animal
    118100966
   04148 Efferocytosis
    118100966
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118100966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsp04131]
    118100966
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsp04147]
    118100966
   04031 GTP-binding proteins [BR:hsp04031]
    118100966
Membrane trafficking [BR:hsp04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    118100966
 Endosome - Lysosome transport
    118100966
Exosome [BR:hsp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118100966
  Exosomal proteins of other body fluids (saliva and urine)
   118100966
  Exosomal proteins of colorectal cancer cells
   118100966
  Exosomal proteins of bladder cancer cells
   118100966
GTP-binding proteins [BR:hsp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    118100966
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16
Other DBs
NCBI-GeneID: 118100966
NCBI-ProteinID: XP_035002421
LinkDB
Position
21:13883797..13887616
AA seq 225 aa
MAGRGGGASRPNGATAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKEL
QRQASPNIVIALAGNKADIANKRAVELQEAQVYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEAQGGAGQGGRTRTGVDLQEAAPQSRSSQCCGGGGGGGN
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctgggcgtggtggaggagcatccaggcctaatggcgccacagcagcaaacaaaatc
tgccagttcaaactggtgctgctgggggagtcggcggtgggcaagtccagcttagtgctg
cgtttcgtcaaaggccagttccatgaattccaggagagtaccattggagctgccttcctc
acccagacggtctgtctggacgacaccacagtgaagtttgagatctgggacacggcgggt
caagagcgctatcacagcctggctccaatgtactacagaggagcacaggcagccatcgtg
gtctacgacattaccaacacagatactttcgtacgagcgaaaaactgggtgaaggagctg
cagagacaagccagtcccaacatcgtgatcgctctggcaggcaacaaggcggacatcgca
aataagagagctgtggagctgcaggaggcacaagtgtacgctgatgacaacagtctactc
ttcatggagacctcggccaagactgccatgaacgtcaatgaaatttttatggccattgct
aagaagctaccaaagaatgaagctcagggtggagctggacaaggtggacgaacccggacg
ggagtggatctacaggaagctgcccctcagagccgcagcagccagtgctgtggtggtggc
ggcggcggcggcaattag

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